Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq3 598 1e-166 seq332406 159 1e-34 seq295831 154 4e-33 seq303336 141 3e-29 seq1619 120 9e-23 seq333312 113 1e-20 seq137405 100 8e-17 >seq3 Length=31233 Score = 598 bits (662), Expect = 1e-166 Identities = 732/994 (74%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | || ||| | ||||||||||| |||| |||||| Sbjct 1671 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 1612 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || | ||| |||||| ||||||||| Sbjct 1611 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCA 1554 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 ||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||| || | Sbjct 1553 TTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTT 1494 Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517 |||| ||||| || || ||||||||| | | |||| | || || || | || | Sbjct 1493 ATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCACT 1434 Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577 | || | ||||||||||| | | |||| |||||| | |||||||| || |||||| Sbjct 1433 TTTACCCAATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAATGGTGGTCCTTATG 1374 Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637 || | | || | |||||| | | ||| | | ||| |||| || || ||||||| Sbjct 1373 AGTTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAAC 1314 Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697 || | ||| || || ||| | || ||||| |||||| || || || ||||| || | Sbjct 1313 TTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAG 1254 Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757 | || ||||| || ||| | |||||||| |||| ||||| ||||| || || |||| Sbjct 1253 CTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGC 1194 Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817 |||| || || || ||||| |||||||||||| | || ||||| ||||| || ||||| | Sbjct 1193 CTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCC 1134 Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877 ||||||| || || || ||| | ||||| || || ||||| || || || | ||| | Sbjct 1133 TTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTG 1074 Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937 ||||||||||| | || || ||| | | | | ||||| || ||||| ||| | Sbjct 1073 CTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCG 1014 Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997 ||| | || |||| |||||||||||||| || || ||||| ||||| || || |||| Sbjct 1013 CTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATG 954 Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACT 43057 |||| ||||| || | |||||||||||||| || || ||| ||| ||||| |||| Sbjct 953 GTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACACT 894 Query 43058 TCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTA 43117 |||| || || |||||||| || || || |||||||| || || | || | || |||| Sbjct 893 TCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATTAGCACTA 834 Query 43118 TGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATG 43177 |||| || ||||| ||||||||||| || || ||||| | ||||||| ||| || || Sbjct 833 TGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTG 774 Query 43178 TCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACG 43237 | || ||||||||||||||| | || ||||| || ||||| | || || ||||||| Sbjct 773 TAATTAATACTTGGGCTGATATCATTAACCGTGCTAATCTTGGTATGGAAGTTATGCACG 714 Query 43238 AGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 |||| ||||| ||||||||||| || || || || Sbjct 713 AGCGTAATGCTCATAACTTCCCTCTAGACCTAGC 680 >seq332406 Length=435 Score = 159 bits (176), Expect = 1e-34 Identities = 193/263 (73%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 42997 GGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCAC 43056 ||||| ||||| || | |||||||||||||| || || ||| || ||||| ||| Sbjct 1 GGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCATTCTTTACAC 60 Query 43057 TTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACT 43116 ||||| || || |||||||| | || || |||| ||| || || | || | || || Sbjct 61 TTCTTCCTAGCTGCTTGGCCTATAGTAGGTATTTTGTTTACCGCTTTAGGTATTAGCGCT 120 Query 43117 ATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCAT 43176 ||||| || ||||| |||||||||| || || |||| | ||||||| ||| || | Sbjct 121 ATGGCTTTCAACTTAGATGGTTTTAATTTCAATCAATTTGTAGTTGATAGTCAAGCTCGT 180 Query 43177 GTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCAC 43236 || || ||||||||||||||| | || ||||| || ||||| | | || |||||| Sbjct 181 GTAATTAATACTTGGGCTGATATCATTAACCGTGCTAATCTTGGTATGAAAGTTATGCAC 240 Query 43237 GAGCGGAATGCACATAACTTCCC 43259 ||||| ||||| ||| ||||||| Sbjct 241 GAGCGTAATGCTCATGACTTCCC 263 >seq295831 Length=1525 Score = 154 bits (170), Expect = 4e-33 Identities = 203/275 (74%), Gaps = 10/275 (4%) Strand=Plus/Plus Query 42310 ACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTGATGATTCCCTGTCTGCTCG-C 42368 ||| | |||| |||||| |||| ||||||| ||| ||||||| |||| || | | | Sbjct 1247 ACTGAAAACCATCTTTACATTGGATGGTTTGTTGTTTTGATGAT-CCCTACCTTATTGAC 1305 Query 42369 TGCTACCACCTGT-TTTATTGTCGCTTTCATTGCTGCCCCTCCGGTAGACATTGATGGCA 42427 || || ||| |||||| ||||||||||||||||||||||| |||| |||||||| Sbjct 1306 CGCAACTTT-TGTATTTATTATCGCTTTCATTGCTGCCCCTCCGATAGATATTGATGGTG 1364 Query 42428 TTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCG 42487 ||||||||||||| | ||| || || || ||||| ||||| || || ||||||||| | Sbjct 1365 TTCGTGAACCTGTTTTTGGATCCCTACTTTATGGAAACAATATTATTTCTGGTGCCATTA 1424 Query 42488 TGCCTAGCAGTAACGCAATT---GGACTACATTTGTATTCGATCTGGGAAGCCAATACCC 42544 | ||| | | |||||| || | || || || | ||||||||||| | | Sbjct 1425 TTCCT---ACTTTTGCAATTATAGGTTTGCACTTTTACCCAATCTGGGAAGCGGCTTCTG 1481 Query 42545 TTGACGAATGGCTCTACAATGGCGGACCTTATCAG 42579 |||| |||||| | |||||||| || |||||| || Sbjct 1482 TTGATGAATGGTTATACAATGGAGGTCCTTATGAG 1516 >seq303336 Length=741 Score = 141 bits (156), Expect = 3e-29 Identities = 158/206 (77%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || |||||||||| | | | ||| | ||| ||||||| |||| |||||| Sbjct 522 TGGGGTCGCTTTTGTAACTAGATAATCAGCACTGAAAACTGTCTTTACATTGGATGGTTT 581 Query 42340 GGTGTGCTGATGATTCCCTGTCTG-CTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || || | || || | ||| |||||| || |||||| Sbjct 582 GGTGTTTTGATGAT-CCCTACCTTACTAACCGCAACTTC-TGTATTTATTATCACTTTCA 639 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 ||||| |||||| |||| | |||||||| |||||||||||| | ||||| ||||| || | Sbjct 640 TTGCTACCCCTCTGGTACATATTGATGGTATTCGTGAACCTATTTCTGGATCTCTACTTT 699 Query 42458 ATGGCAACAACATCATCTCTGGTGCC 42483 |||| ||||| || || ||||||||| Sbjct 700 ATGGAAACAATATTATTTCTGGTGCC 725 >seq1619 Length=8420 Score = 120 bits (132), Expect = 9e-23 Identities = 218/312 (70%), Gaps = 8/312 (3%) Strand=Plus/Plus Query 42289 TTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTG 42348 |||||||||||| | || | | || |||||||| |||| ||||||||||| || Sbjct 2762 TTTTGTAACTGGATAACCAGCGTTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTGTG 2821 Query 42349 ATGATTCCCTGTCTGCTCGCTGCTACCACCTGT-TTTATTGTCGCTTTCATTGCTGCCCC 42407 |||| ||||| || | || | | | ||| |||||| ||||||| ||||||| ||| Sbjct 2822 ATGA-TCCCTACCTTATGACT-CCAACTTTTGTATTTATTATCGCTTTTATTGCTG-CCC 2878 Query 42408 TCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACAA 42467 || ||||| |||||||| |||||||||| ||| | ||| ||||| || ||| | ||||| Sbjct 2879 TCTAGTAGATATTGATGGTATTCGTGAACTTGTTTTTGGATCTCTACTTTATAGAAACAA 2938 Query 42468 CATCATCTCTGGTGCCGTCGTGCCTA--GCAGTAACGCAATTGGACTACATTTGTATTCG 42525 || || | |||| | | |||| | | || | || || | || || || || Sbjct 2939 TATTATTTTTGGTTTTATTATTCCTACTTCTGCAA--CTATAGGTTTGCACTTTTACTCA 2996 Query 42526 ATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCAGCTCGTC 42585 ||||| ||| | | |||| |||||||| |||||||| || ||| || || | | Sbjct 2997 ATCTGAAAAGTGGCTTCTGTTGATGAATGGCTATACAATGGTGGTCCTAATGAGTTAATT 3056 Query 42586 GTGTTCCACTTC 42597 || | |||||| Sbjct 3057 GTTCTACACTTC 3068 >seq333312 Length=291 Score = 113 bits (124), Expect = 1e-20 Identities = 198/285 (69%), Gaps = 5/285 (2%) Strand=Plus/Minus Query 42545 TTGACGAATGGCTCTACAATGGCGGACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCG 42604 |||| |||||| | |||||||| || |||||| || | | | | |||||| | | | Sbjct 285 TTGATGAATGGTTATACAATGGTGGTCCTTATGAGTTAATTGCTCTACACTTCTTACTTG 226 Query 42605 GTATCTTCTCTTACTTGGGACGCGAATGGGAACTTTCGTACCGACTTGGG-ATGAG---G 42660 || | | ||| |||| | || ||||||||| | | | || || ||||| | Sbjct 225 GTGTAGCTTGTTATATGGGTCATGAGTGGGAACTTAGTTTCTGTCTGGGTCATGAGTGGG 166 Query 42661 CCCTGGATCTTTGT-TGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCAGTCTTCCTTGT 42719 || | || || || || || || ||||| || | || ||||| || ||| | | Sbjct 165 AACTTAGTTTTCGTCTGGGTATTCAGCTCCTGTTGCAGTTGCTACTGCTGTTTTCTTGAT 106 Query 42720 CTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTT 42779 ||||||| || | ||||| ||||| || || |||||||| || || || ||||| || Sbjct 105 CTATCCAATTAGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTT 46 Query 42780 CAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCA 42824 |||||||||| | || ||||| ||||| || ||||| |||||||| Sbjct 45 CAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 1 >seq137405 Length=2057 Score = 100 bits (110), Expect = 8e-17 Identities = 329/507 (65%), Gaps = 11/507 (2%) Strand=Plus/Plus Query 42741 TTTTTCAGATGGAATGCCTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCA 42800 ||||| || | |||||| | || || | | |||| || ||||| ||| | | || | Sbjct 608 TTTTTTTGACCGCATGCCTTTAGGAATCTGCTGTACTTTGAACTTTATGATTATATTATA 667 Query 42801 GGCTGAACATAACATTCTTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGG 42860 ||| || ||||| |||||||| | || | ||| | ||||| || | ||||| Sbjct 668 AGCTATGCACAACATCCTTATGCACCTATTTCGCATGTTAGGTGTAGCTAGTGTATTCAA 727 Query 42861 TGGGTCGTTGTTCTCAGCTATGCATGGTAGTCTTG-TCACCTCTTCTCTTGTGCGTGAAA 42919 || || | ||| ||||| |||||| ||| | | | |||| | | | | || Sbjct 728 CGGCTCCCTATTCAGTGCTATACATGGTT-TCTCGATAATCTCTAGTTTGATCAAGGCAA 786 Query 42920 CGACTGAAAACGAAAGCCAAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGA-CTTAT 42978 | || |||| || | ||| | || | | |||| |||| |||| | | | ||| Sbjct 787 CCACAAAAAATAAATCCGTTAATAAAGGTCATATATTCGATCAAAAGGAAAAAAACCTAT 846 Query 42979 AACATTGTTGCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTTAAT 43038 || |||| || || ||||||| ||||| || | ||||||||| || || || Sbjct 847 AATGTTGTAGCCGCTTATGGTTATTTTGGCCGATTGATCTTCCAACATAAAAATTTCAAC 906 Query 43039 AATAGTCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACT 43098 ||| ||| ||||| |||||||||| | ||||||| || | || | | |||| || Sbjct 907 AATTCTCGTTCTTTACACTTCTTTCCAGTTGCTTGGCTTGTAATAGGTACTGGGTTTACC 966 Query 43099 TCTCTTGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTT 43158 | | | | || |||| ||| |||||||| || | |||||| || |||| |||| Sbjct 967 GCCTTAGATATTAGCACTACGGCTTTTAACTTAAAGGATTTTAATTT----CAATTACTT 1022 Query 43159 ----GTTGATAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAA 43214 | |||| ||| | ||| || ||||||||||||||| | || | |||||| Sbjct 1023 TGTAGCTGATGGTCAAGGTTGTGTAATTAATACTTGGGCTGATATCATTAACCATGCCAA 1082 Query 43215 CCTTGGCTTTGAGGTGATGCACGAGCG 43241 ||| | | | || ||||| ||||| Sbjct 1083 TCTTCGTATGAAAGTTATGCATGAGCG 1109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142857794396700