Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq3 479 8e-131 seq332406 129 2e-25 seq333312 89.7 2e-13 seq295831 87.8 5e-13 seq371407 80.6 8e-11 >seq3 Length=31233 Score = 479 bits (530), Expect = 8e-131 Identities = 698/984 (71%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| ||| || || |||||||||||||||||||||||||||||||| | || || ||| Sbjct 680 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCCATACCAAGATTA 739 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 || ||||| | | ||||||||| ||| |||| || | | ||| ||||| || Sbjct 740 GCACGGTTAATGATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTACAGAT 799 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 || || || ||||||||||||| ||| || ||||| |||| ||||| | || || | | Sbjct 800 TGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCGGTAAAC 859 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || || || || ||||||| ||| || ||||| || | |||||| || || ||| Sbjct 860 CAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAATTGTTGAAA 919 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 || ||||| || || || |||| ||||| || || || || || ||||||||||| || Sbjct 920 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGTT 979 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236 ||||| ||||| || || | || || | ||| || | | ||||| ||||| Sbjct 980 TCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCCCTG 1039 Query 26237 ATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACC 26296 || | ||||| ||||| || ||||||||| ||| || | || ||||| || Sbjct 1040 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATACA 1099 Query 26297 CCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACG 26356 ||||| ||||| ||| || ||||||||||| || || || || || ||||||||||| Sbjct 1100 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATACA 1159 Query 26357 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGT 26416 | ||| ||||| |||||||||||||| || |||||||| || ||| ||| || ||||| Sbjct 1160 ATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCTTGA 1219 Query 26417 CCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACA 26476 || | ||||| | ||||| || || ||| || | | || |||| |||||||||| Sbjct 1220 CCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACA 1279 Query 26477 AATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATATGCT 26536 ||||| || | ||| || || | | || |||||||||| | || ||| Sbjct 1280 GCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAA 1339 Query 26537 GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCAC 26596 ||||| || | ||||||||| | | ||| | | ||| || || |||||||||| ||| Sbjct 1340 GCTACACCAAGTAAGAAGTGTAGAACAATTAACTCATAAGGACCACCATTGTATAACCAT 1399 Query 26597 TCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAG 26656 || || | | | ||||||||||| |||||||| || | || || || ||| | Sbjct 1400 TCATCAACAGAAGCCGCTTCCCAGATTGGGTAAAAGTGCAAACCTATAGCCGCAGAAGTA 1459 Query 26657 GGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCA 26716 || | | || || || || ||||||||||| || | || || || ||||| || ||| Sbjct 1460 GGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCA 1519 Query 26717 CGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTAGT 26775 || || ||||| |||||||| || || || || ||||| || | ||||| ||| | ||| Sbjct 1520 CGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACA-GAAGT 1578 Query 26776 GGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCTC 26835 || | | |||| || ||||| | || || |||||||| | || |||||||| || Sbjct 1579 TGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTC 1638 Query 26836 AGTACTTGTAACCCACTCACAAAA 26859 ||| || || | ||| | ||| || Sbjct 1639 AGTGCTGGTTATCCAGTTACAGAA 1662 >seq332406 Length=435 Score = 129 bits (142), Expect = 2e-25 Identities = 193/274 (70%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 25878 CTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTAG 25937 ||| ||| | || |||| |||||||||||||||||||||||||| | || || |||| Sbjct 274 CTAGGTCTACAGGGAAGTCATGAGCATTACGCTCGTGCATAACTTTCATACCAAGATTAG 215 Query 25938 CTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGACT 25997 | ||||| | | ||||||||| ||| |||| | | | ||| ||||| | | Sbjct 214 CACGGTTAATGATATCAGCCCAAGTATTAATTACACGAGCTTGACTATCAACTACAAATT 155 Query 25998 GGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGCC 26057 | || || |||||||||| || ||| || ||||| | || ||||| | || || | | Sbjct 154 GATTGAAATTAAAACCATCTAAGTTGAAAGCCATAGCGCTAATACCTAAAGCGGTAAACA 95 Query 26058 ATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAAC 26117 | || || || | ||||||| ||| || ||||| || | |||| | || || |||| Sbjct 94 AAATACCTACTATAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAATGAGAATTGTTGAAAC 35 Query 26118 TCGCATACTGAAAAATTAATCTCCCAAAGTACCC 26151 | ||||| || || || |||| ||||| || || Sbjct 34 TTGCATATTGGAAGATCAATCGGCCAAAATAACC 1 >seq333312 Length=291 Score = 89.7 bits (98), Expect = 2e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 26324 TGCATGAGTATATTATGTTCTGCTTGGAATACGAACATAAAGTTAAAAGTACCAGAGATA 26383 ||||| || || || || || ||||||||||| | ||| ||||| |||||||||||||| Sbjct 1 TGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGAAAGTACCAGAGATT 60 Query 26384 CCAAGAGGCATTCCATCACTAAAACTCCCTTGTCCGAAAGGATAAACTAAGAACACTGC 26442 || |||||||| || ||| ||| || ||||| | | ||||| | ||||| || || Sbjct 61 CCTAGAGGCATACCGTCAGAAAAGCTTCCTTGACTAATTGGATAGATCAAGAAAACAGC 119 >seq295831 Length=1525 Score = 87.8 bits (96), Expect = 5e-13 Identities = 189/277 (68%), Gaps = 8/277 (3%) Strand=Plus/Minus Query 26572 ATATGGTCCGCCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAA 26631 ||| || || |||||||||| ||| || || | | | ||||||||||| |||||||| Sbjct 1513 ATAAGGACCTCCATTGTATAACCATTCATCAACAGAAGCCGCTTCCCAGATTGGGTAAAA 1454 Query 26632 ATGTAGTCCGAT---TGCGTTAGAGGAGGGGACGACTGCTCCTGATATTATATTGTTTCC 26688 || | || || ||| | || ||| | | || || || || ||||||||||| Sbjct 1453 GTGCAAACCTATAATTGCA--AAAGTAGGA-ATAATGGCACCAGAAATAATATTGTTTCC 1397 Query 26689 GTACATTAACGAGCCGGAAACTGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGC 26748 || | || || || |||| || ||||| | ||||| ||||||| || || || || Sbjct 1396 ATAAAGTAGGGATCCAAAAACAGGTTCACGAACACCATCAATATCTATCGGAGGGGCAGC 1337 Query 26749 GATGAAGGCAAGTATAAA-ACATGTAGTGGCTGCGAGTAAGCAGGGTATCATAAGCACCC 26807 ||||| || | ||||| ||| ||| || | | |||| || ||||| | || Sbjct 1336 AATGAAAGCGATAATAAATACA-AAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACAA 1278 Query 26808 CGAACCATCCCACATAGAGACGGTTCTCAGTACTTGT 26844 | |||||||| | || ||| |||| ||||| || || Sbjct 1277 CAAACCATCCAATGTAAAGATGGTTTTCAGTGCTGGT 1241 >seq371407 Length=281 Score = 80.6 bits (88), Expect = 8e-11 Identities = 124/176 (70%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 26459 GGTGCTGTATATGCAACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCAC 26518 || |||| |||||||||| ||||| || | ||| ||||| | || ||||||||| Sbjct 11 GGAGCTGAATATGCAACAGCAATCCAAGGGCGCATACCTAGACGAAAACTAAGTTCCCAC 70 Query 26519 TGTCTCCCTGCATATGCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGT 26578 | | || ||| ||||| || | ||||||||| | | ||| | ||| || Sbjct 71 TCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAACACATAAGGA 130 Query 26579 CCGCCATTGTATAGCCACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATG 26634 || |||||||||| ||| || || | | || ||||||||||| ||||||||||| Sbjct 131 CCACCATTGTATAACCATTCATCAACAGAACC-GCTTCCCAGATTGGGTAAAAATG 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147017340468000