Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq3 574 6e-159 seq295831 138 1e-27 seq332406 129 7e-25 seq181776 122 1e-22 seq1619 107 2e-18 seq303336 98.7 1e-15 seq333312 93.3 5e-14 seq366516 86.0 7e-12 seq223344 86.0 7e-12 >seq3 Length=31233 Score = 574 bits (636), Expect = 6e-159 Identities = 712/972 (73%), Gaps = 12/972 (1%) Strand=Plus/Minus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | || | || ||||| |||||| | ||||||||| | | | | | Sbjct 1640 CTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCG 1581 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | || | || ||| |||| ||||||||||| ||||| ||||| ||||||||||||| Sbjct 1580 CAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTC 1521 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 ||||||| || |||| ||| || | ||||| ||||| || || |||||||| || | | Sbjct 1520 GTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTC 1461 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 ||| ||| || || ||| | ||||| || || || |||||||| || || |||||| Sbjct 1460 CTACTTCTGCGGCTATAGGTTTGCACTTTTACCCAATCTGGGAAGCGGCTTCTGTTGATG 1401 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCA 155290 | ||||| |||||||||||||||| | | | || | |||||| | | || | Sbjct 1400 AATGGTTATACAATGGTGGTCCTTATGAGTTAATTGTTCTACACTTCTTACTTGGTGT-- 1343 Query 155291 CAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGA 155347 ||| | | | |||||| ||||||||||| || |||||| || ||||| ||||||| Sbjct 1342 -AGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGA 1284 Query 155348 TCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTT 155407 | ||||||||| || || || || | ||||| ||||| ||| | | ||||| Sbjct 1283 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAA 1224 Query 155408 TCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATA 155467 | |||||||| || ||||| | |||||||| || |||||||||||||| |||| | Sbjct 1223 TTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCA 1164 Query 155468 TGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAG 155527 || | || |||||||| || ||||| |||||||||||||| || |||||| | || |||| Sbjct 1163 TGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAG 1104 Query 155528 CAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCAC 155587 | ||||| ||||| || || || ||| ||||||||| ||||| ||||| || ||| Sbjct 1103 CTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTT 1044 Query 155588 TAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAG 155647 | ||| | ||||| || || | || || || | ||||||| ||||| ||||| | Sbjct 1043 TGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAGATTCGGTCAAGAGG 984 Query 155648 AAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATG 155707 ||||||| ||||| ||||| || |||||||| || || || || | |||||||| |||| Sbjct 983 AAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATG 924 Query 155708 CATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCA 155767 || |||||||| || | | | ||||||||||| ||||| |||||||| || | | Sbjct 923 CAAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTA 864 Query 155768 TCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCA 155827 | ||| || ||| | ||| | || ||||| |||||| | || ||||| || |||| Sbjct 863 TTTGGTTTACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCA 804 Query 155828 ACCAGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTA 155884 | || |||||||| || |||| ||| || || ||| ||||| || || ||| Sbjct 803 ATCAATCTGTAGTTGA---TAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATCATTA 747 Query 155885 ACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTG 155944 |||| ||| ||||||||||||||| |||||||||||||| ||||| ||||||||||| | Sbjct 746 ACCGTGCTAATCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCATAACTTCCCTCTAG 687 Query 155945 ACCTTGCTGCTG 155956 |||| |||| || Sbjct 686 ACCTAGCTGGTG 675 >seq295831 Length=1525 Score = 138 bits (152), Expect = 1e-27 Identities = 149/196 (76%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 155062 TTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTC 155121 || ||| |||| ||||||||||| ||||| |||| ||||||||| |||||||||| || Sbjct 1319 TTTATTATCGCTTTCATTGCTGCCCCTCCGATAGATATTGATGGTGTTCGTGAACCTGTT 1378 Query 155122 GCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAAC 155181 ||| || || | ||||| ||||| || || |||||||| || | |||| || Sbjct 1379 TTTGGATCCCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTT---TT 1435 Query 155182 GCAATT---GGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTG 155238 |||||| ||| | ||||| || || || |||||||| || || ||||||| ||||| Sbjct 1436 GCAATTATAGGTTTGCACTTTTACCCAATCTGGGAAGCGGCTTCTGTTGATGAATGGTTA 1495 Query 155239 TACAATGGTGGTCCTT 155254 |||||||| ||||||| Sbjct 1496 TACAATGGAGGTCCTT 1511 >seq332406 Length=435 Score = 129 bits (142), Expect = 7e-25 Identities = 204/289 (71%), Gaps = 10/289 (3%) Strand=Plus/Plus Query 155677 GGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTT--C 155734 || || || || || | |||||||| |||||| |||||||| || | |||| | Sbjct 1 GGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTC--ATTCTTTAC 58 Query 155735 ACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAA 155794 |||||||||| ||||| |||||| | || | || | | || ||| | ||| | Sbjct 59 ACTTCTTCCTAGCTGCTTGGCCTATAGTAGGTATTTTGTTTACCGCTTTAGGTATTAGCG 118 Query 155795 CGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT---G 155851 | ||||| |||||| | | ||||| || ||||| || | |||||| || |||| | Sbjct 119 CTATGGCTTTCAACTTAGATGGTTTTAATTTCAATCAATTTGTAGTTGA---TAGTCAAG 175 Query 155852 GTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAA 155911 | || || ||| ||||| || || ||||||| ||| |||||||||| |||| | Sbjct 176 CTCGTGTAATTAATACTTGGGCTGATATCATTAACCGTGCTAATCTTGGTATGAAAGTTA 235 Query 155912 TGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGA 155960 ||||||||||||| ||||| |||||||| | ||||| | || || ||| Sbjct 236 TGCACGAGCGTAATGCTCATGACTTCCCTGTAGACCTAGTTGGTGTTGA 284 >seq181776 Length=4072 Score = 122 bits (134), Expect = 1e-22 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 155495 TCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCT 155554 ||||||||||||| || |||||| | || ||||| ||||| ||||| | || || ||| Sbjct 4072 TCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCAGCTCCCTATTCA 4013 Query 155555 CTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGT 155614 ||||||||| ||||| ||||| || ||| | ||| | ||||| || || | || | Sbjct 4012 GTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAAT 3953 Query 155615 CTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTC 155674 || || | |||||| ||||| ||||| |||||||| ||||| ||||| | |||| Sbjct 3952 CTGTTAATGAAAGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAACCGCTC 3893 Query 155675 ATGGATA 155681 |||| || Sbjct 3892 ATGGTTA 3886 >seq1619 Length=8420 Score = 107 bits (118), Expect = 2e-18 Identities = 171/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTC 155070 || ||||| |||||| | ||||||||| ||| | || | || || ||| || Sbjct 2804 GGATGGTTTGGTGTTGTGATGATCCCTA-CCTTATGACTCCAACTTTTGTATTTATTATC 2862 Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130 || || |||||||| |||| ||||| ||||||||||||||||||| || ||| ||| Sbjct 2863 GCTTTTATTGCTGC-CCTCTAGTAGATATTGATGGTATTCGTGAACTTGTTTTTGGATCT 2921 Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGT 155190 || | ||| | ||||| || || | |||| | || | |||| ||| | || ||| Sbjct 2922 CTACTTTATAGAAACAATATTATTTTTGGTTTTATTATTCCTACTTCTGCAACTATAGGT 2981 Query 155191 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGT 155250 | ||||| || | || || ||| || || ||||||| ||| | |||||||||||| Sbjct 2982 TTGCACTTTTACTCAATCTGAAAAGTGGCTTCTGTTGATGAATGGCTATACAATGGTGGT 3041 Query 155251 CCT 155253 ||| Sbjct 3042 CCT 3044 >seq303336 Length=741 Score = 98.7 bits (108), Expect = 1e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTC 155070 || ||||| |||||| | ||||||||| | | || | || || | || ||| || Sbjct 573 GGATGGTTTGGTGTTTTGATGATCCCTACCTTACTAACCGCAACTTCTGTATTTATTATC 632 Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130 | ||||||||| | |||| ||| | |||||||||||||||||||| | |||| ||| Sbjct 633 ACTTTCATTGCTACCCCTCTGGTACATATTGATGGTATTCGTGAACCTATTTCTGGATCT 692 Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTC 155177 || | ||||| ||||| || || |||||||| || | |||| ||| Sbjct 693 CTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTC 739 >seq333312 Length=291 Score = 93.3 bits (102), Expect = 5e-14 Identities = 197/291 (68%), Gaps = 11/291 (4%) Strand=Plus/Minus Query 155222 CTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTA 155281 || ||||||| ||||| |||||||||||||||| | | | | | |||||| | Sbjct 288 CTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGTTAATTGCTCTACACTTCTTAC 229 Query 155282 TCGGAATCACAGCATACTGT---GGTCGTCAGTGGGAACTTTCTTACCGTCTTGG-CATG 155337 | || | ||| | | | |||| | ||||||||||| || | |||| || |||| Sbjct 228 TTGGTGT---AGCTTGTTATATGGGTCATGAGTGGGAACTTAGTTTCTGTCTGGGTCATG 172 Query 155338 CGTC----CTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATT 155393 || ||| | | | || || || || || || | | ||| ||||| || Sbjct 171 AGTGGGAACTTAGTTTTCGTCTGGGTATTCAGCTCCTGTTGCAGTTGCTACTGCTGTTTT 112 Query 155394 CCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGG 155453 | | | ||||| | ||||||| || ||||| | |||||||| || |||||||| Sbjct 111 CTTGATCTATCCAATTAGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGG 52 Query 155454 TACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCA 155504 |||||| |||| ||| | || |||||||| || ||||| ||||||||||| Sbjct 51 TACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 1 >seq366516 Length=3420 Score = 86.0 bits (94), Expect = 7e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 155895 TCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGC 155954 ||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| |||| Sbjct 2766 TCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCATAACTTCCCTCTAGACCTAGCTGG 2825 Query 155955 TG 155956 || Sbjct 2826 TG 2827 >seq223344 Length=745 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 155878 ATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTC 155937 ||| ||||||| ||| ||||||||||||||| ||||| |||||||| ||||| ||||| Sbjct 685 ATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAGCGTAATGCTCATAACTTT 626 Query 155938 CCTCTTGACCTTGCT 155952 ||||| ||||| ||| Sbjct 625 CCTCTAGACCTAGCT 611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581940082999000