Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq3 493 4e-135 seq332406 125 2e-24 seq333312 104 7e-18 seq295831 104 7e-18 seq303336 96.9 1e-15 seq1619 96.9 1e-15 seq137405 86.0 2e-12 seq223344 82.4 2e-11 >seq3 Length=31233 Score = 493 bits (546), Expect = 4e-135 Identities = 702/985 (71%), Gaps = 2/985 (0%) Strand=Plus/Plus Query 40532 AGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACT 40591 ||||| ||||||||| ||||| ||||| |||||||||||||| ||||||||||| ||| | Sbjct 679 AGCTAGGTCTAGAGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCCATACCAAGATT 738 Query 40592 CTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGA 40651 | ||||| | ||||||||||||| ||| || ||| | | || ||||| || Sbjct 739 AGCACGGTTAATGATATCAGCCCAAGTATTAATTACACGACCTTGACTATCAACTACAGA 798 Query 40652 CTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAG 40711 || || || ||||||||||| | ||| ||||||||||| ||||| | | ||||| Sbjct 799 TTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCGGTAAA 858 Query 40712 CCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAA 40771 ||| || || | || || ||||| | || |||||||||| | ||| ||||||||| Sbjct 859 CCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAATTGTTGAA 918 Query 40772 TGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAAGT 40831 |||||||| || || | || ||||| ||||| || || ||||| || ||||| || Sbjct 919 ACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATATTATAGGT 978 Query 40832 CTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCCCG 40891 || | || ||||| || | || || | || |||||| |||| ||||| |||| Sbjct 979 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGGTTTCCCT 1038 Query 40892 AATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAGAC 40951 || | ||||| || | | || ||||||||| || | | || || || || Sbjct 1039 GATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAATAC 1098 Query 40952 GCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAGAC 41011 || || || || | ||| || ||||||||||| || |||||||| || |||||||| || Sbjct 1099 ACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTTGGAATAC 1158 Query 41012 AAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCCTG 41071 || |||||||||||| || ||| |||||||| ||||||||| ||||| || || || Sbjct 1159 AATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGCTTCCTTG 1218 Query 41072 ACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCCAC 41131 ||| | |||||| | ||||| ||||| ||| |||| | ||||||| ||||| || Sbjct 1219 ACCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAAC 1278 Query 41132 AAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTATGC 41191 | ||||| || | |||||| || | | | ||||||||||| | ||| || Sbjct 1279 AGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACA 1338 Query 41192 TGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCA 41251 ||||| || | ||| ||||| | ||||| | | ||| || || || ||||||| ||| Sbjct 1339 AGCTACACCAAGTAAGAAGTGTAGAACAATTAACTCATAAGGACCACCATTGTATAACCA 1398 Query 41252 CTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCT 41311 || || | | | ||||||||||||||||| || || | || || || ||| | Sbjct 1399 TTCATCAACAGAAGCCGCTTCCCAGATTGGGTAAAAGTGCAAACCTATAGCCGCAGAAGT 1458 Query 41312 CGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTC 41371 |||| | || ||||| ||||||||||| || || | || || || ||||| || || Sbjct 1459 AGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTC 1518 Query 41372 ACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGG 41430 ||| || ||||| |||||||| || || || || || || ||||| || || ||| | | Sbjct 1519 ACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAAATACA-GAAG 1577 Query 41431 TAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGT 41490 | || || | ||| | || ||||| | ||||||||||| || | ||| || ||||| | Sbjct 1578 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTT 1637 Query 41491 CGGTGCTAGTGACCCAGTTACAAAA 41515 | ||||| || | ||||||||| || Sbjct 1638 CAGTGCTGGTTATCCAGTTACAGAA 1662 >seq332406 Length=435 Score = 125 bits (138), Expect = 2e-24 Identities = 192/274 (70%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 40534 CTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACTCT 40593 ||| ||||| ||| |||| ||||| |||||||||||||| |||| |||||| ||| | Sbjct 274 CTAGGTCTACAGGGAAGTCATGAGCATTACGCTCGTGCATAACTTTCATACCAAGATTAG 215 Query 40594 GTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGACT 40653 | ||||| | ||||||||||||| ||| || | | | | || ||||| | | Sbjct 214 CACGGTTAATGATATCAGCCCAAGTATTAATTACACGAGCTTGACTATCAACTACAAATT 155 Query 40654 GGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAGCC 40713 | || || |||||||||| | ||| |||||||||| ||||| | | ||||| | Sbjct 154 GATTGAAATTAAAACCATCTAAGTTGAAAGCCATAGCGCTAATACCTAAAGCGGTAAACA 95 Query 40714 ATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGAATG 40773 | || || | | || ||||| | || |||||||||| | | | ||||||||| Sbjct 94 AAATACCTACTATAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAATGAGAATTGTTGAAAC 35 Query 40774 AAGCATATTGAAATATTAGTCTACCAAAGTAACC 40807 |||||||| || || | || ||||| ||||| Sbjct 34 TTGCATATTGGAAGATCAATCGGCCAAAATAACC 1 >seq333312 Length=291 Score = 104 bits (114), Expect = 7e-18 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 40980 TGCATGAGAATGTTGTGTTCTGCTTGGAAGACAAACATGAAGTTGAATGTTCCACTGATT 41039 ||||| || |||||||| || |||||||| |||| |||||||||||| || ||| |||| Sbjct 1 TGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGAAAGTACCAGAGATT 60 Query 41040 CCTAAAGGCATACCATCAGAGAAAGAACCCTGACCGAATGGATAAACTAAGAATACAGCT 41099 |||| ||||||||| ||||| || || |||| | |||||| | ||||| ||||| Sbjct 61 CCTAGAGGCATACCGTCAGAAAAGCTTCCTTGACTAATTGGATAGATCAAGAAAACAGCA 120 Query 41100 AGAGCTGCTGACAATGGAGCTG 41121 ||| ||| | ||||||| Sbjct 121 GTAGCAACTGCAACAGGAGCTG 142 >seq295831 Length=1525 Score = 104 bits (114), Expect = 7e-18 Identities = 204/298 (68%), Gaps = 8/298 (3%) Strand=Plus/Minus Query 41217 ACAATGAGTTGATATGGTCCGCCGTTGTATAGCCACTCGTCCAGTGTGCCGGCTTCCCAG 41276 ||||| | | ||| || || || ||||||| ||| || || | | | ||||||||| Sbjct 1524 ACAATTAACTCATAAGGACCTCCATTGTATAACCATTCATCAACAGAAGCCGCTTCCCAG 1465 Query 41277 ATTGGGTAGAAATGTAGTCCGAT---TGCGTTAGAGCTCGGAACGACAGCTCCAGATATA 41333 |||||||| || || | || || ||| || | |||| | || ||||| ||| Sbjct 1464 ATTGGGTAAAAGTGCAAACCTATAATTGCAAAAG---TAGGAATAATGGCACCAGAAATA 1408 Query 41334 ATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCATCTATATCTACA 41393 |||||||| || || | || || || |||| || ||||| | ||||| ||||||| Sbjct 1407 ATATTGTTTCCATAAAGTAGGGATCCAAAAACAGGTTCACGAACACCATCAATATCTATC 1348 Query 41394 GGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGTAATGCTGGAAT 41452 || || || || || || ||||| || || ||| || || || | ||| | || || Sbjct 1347 GGAGGGGCAGCAATGAAAGCGATAATAAATACA-AAAGTTGCGGTCAATAAGGTAGGGAT 1289 Query 41453 CATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGTGACCCAGTTA 41510 ||| | ||| ||||||| || | ||| || |||| || ||||| || | | ||||| Sbjct 1288 CATCAAAACAACAAACCATCCAATGTAAAGATGGTTTTCAGTGCTGGTTATCTAGTTA 1231 >seq303336 Length=741 Score = 96.9 bits (106), Expect = 1e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 41322 GCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCA 41381 || ||||| ||||||||||| || || | || || || |||| || ||||| || ||| Sbjct 724 GCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAATAGGTTCACGAATACCA 665 Query 41382 TCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAG 41440 || |||| ||| | || | || || || | ||| || || ||| | || || ||||| Sbjct 664 TCAATATGTACCAGAGGGGTAGCAATGAAAGTGATAATAAATACA-GAAGTTGCGGTTAG 606 Query 41441 TAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGT 41500 ||| | || ||||| | ||||||||||| || | ||| || | ||| || ||||| | Sbjct 605 TAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACAGTTTTCAGTGCTGAT 546 Query 41501 GACCCAGTTACAAAA 41515 | | |||||||||| Sbjct 545 TATCTAGTTACAAAA 531 >seq1619 Length=8420 Score = 96.9 bits (106), Expect = 1e-15 Identities = 219/324 (68%), Gaps = 4/324 (1%) Strand=Plus/Minus Query 41193 GCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCAC 41252 ||||| || | ||| ||||| | ||||| | | || || || || ||||||||||| Sbjct 3082 GCTACACCAAGTAAGAAGTGTAGAACAATTAACTCATTAGGACCACCATTGTATAGCCAT 3023 Query 41253 TCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTC 41312 || || | | | ||| ||||||| ||| || || | || || | ||| | Sbjct 3022 TCATCAACAGAAGCCACTTTTCAGATTGAGTAAAAGTGCAAACCTATAGTTGCAGAAGTA 2963 Query 41313 GGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCA 41372 |||| | | ||| | ||||||||||| | || | || || || |||| | ||| Sbjct 2962 GGAATAATAAAACCAAAAATAATATTGTTTCTATAAAGTAGAGATCCAAAAACAAGTTCA 2903 Query 41373 CGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGT 41431 || || ||||| |||||||| | || || || ||||| ||||| || || ||| || Sbjct 2902 CGAATACCATCAATATCTACTAGAGG-GCAGCAATAAAAGCGATAATAAATACA-AAAGT 2845 Query 41432 AGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTC 41491 | ||| | ||| | || ||||| | ||||||||||| || | ||| || || || || Sbjct 2844 TGGAGTCA-TAAGGTAGGGATCATCACAACACCAAACCATCCAATGTAAAGACGATTTTC 2786 Query 41492 GGTGCTAGTGACCCAGTTACAAAA 41515 ||| || | |||||||||||| Sbjct 2785 AACGCTGGTTATCCAGTTACAAAA 2762 >seq137405 Length=2057 Score = 86.0 bits (94), Expect = 2e-12 Identities = 204/308 (66%), Gaps = 9/308 (3%) Strand=Plus/Minus Query 40533 GCTAAGTCTAGAGGAAAGTTGTGAG--CGTTAC-------GCTCGTGCATTACTTCCATA 40583 |||||||||| || ||||| ||| | |||| |||| ||||| |||| |||| Sbjct 1148 GCTAAGTCTAAGGGGAAGTTATGATACCATTACTCCCGTCGCTCATGCATAACTTTCATA 1089 Query 40584 CCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCT 40643 | ||| | ||||| | ||||||||||||| ||| || ||| | | | || Sbjct 1088 CGAAGATTGGCATGGTTAATGATATCAGCCCAAGTATTAATTACACAACCTTGACCATCA 1029 Query 40644 ACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATG 40703 |||| | | || || |||||| | || | |||||||||| |||| ||| | | | Sbjct 1028 GCTACAAAGTAATTGAAATTAAAATCCTTTAAGTTAAAAGCCGTAGTGCTAATATCTAAG 969 Query 40704 GAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTA 40763 | ||||| || | || || || | ||||| | |||||||||||| | ||| | Sbjct 968 GCGGTAAACCCAGTACCTATTACAAGCCAAGCAACTGGAAAGAAGTGTAAAGAACGAGAA 909 Query 40764 TTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATG 40823 |||||||| || ||| || || | || ||||| ||||| | || ||||| | Sbjct 908 TTGTTGAAATTTTTATGTTGGAAGATCAATCGGCCAAAATAACCATAAGCGGCTACAACA 849 Query 40824 TTATAAGT 40831 ||||| || Sbjct 848 TTATAGGT 841 >seq223344 Length=745 Score = 82.4 bits (90), Expect = 2e-11 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 40532 AGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACT 40591 ||||| ||||||||||||||| ||||| |||||||| ||||| ||||||||||| ||| | Sbjct 611 AGCTAGGTCTAGAGGAAAGTTATGAGCATTACGCTCATGCATAACTTCCATACCAAGATT 670 Query 40592 CTGTCTGTTAAGAACATCAGCCCAAGTA 40619 | ||||| || || ||| ||||| Sbjct 671 AGCACGGTTAATAATATTAGCTTAAGTA 698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143026596802350