Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq3 594 6e-165 seq332406 138 1e-27 seq181776 122 1e-22 seq333312 116 4e-21 seq295831 116 4e-21 seq137405 109 6e-19 seq14652 93.3 5e-14 seq303336 89.7 6e-13 seq366516 84.2 2e-11 >seq3 Length=31233 Score = 594 bits (658), Expect = 6e-165 Identities = 728/991 (73%), Gaps = 12/991 (1%) Strand=Plus/Plus Query 67357 CAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAA 67416 || |||| ||||| ||||||||||| ||||| ||||||||||||||||||||||| |||| Sbjct 675 CACCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCCATACCAA 734 Query 67417 GTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCG---TCAA 67473 | || | ||||| ||| || ||||||||| ||| || || |||| |||| Sbjct 735 GATTAGCACGGTTAATGATATCAGCCCAAGTATTAATTAC---ACGACCTTGACTATCAA 791 Query 67474 CGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTG 67533 | || ||||| ||||| || ||||| || | |||||| |||||||| | ||| | | Sbjct 792 CTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAG 851 Query 67534 CAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGT 67593 | || ||||| || | || ||||| | ||||| ||||||||||| | | | || | Sbjct 852 CGGTAAACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAACGAGAAT 911 Query 67594 TGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGT 67653 |||||||| |||||| ||||||||||| || || || || |||||||| || ||||| | Sbjct 912 TGTTGAAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACAATAT 971 Query 67654 TGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAG 67713 | || || ||||| ||||| ||||| ||||||| | || || || | || || | Sbjct 972 TATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCGGATTCATTTTCTGTGG 1031 Query 67714 TTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCAC 67773 |||| ||||| | | |||||| || | ||||| ||||||||||| || || || || | Sbjct 1032 TTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGC 1091 Query 67774 CGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTT 67833 |||||||||| ||||| || | ||| || |||||||||||||||||||||||||| |||| Sbjct 1092 CGAATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCTT 1151 Query 67834 GGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAG 67893 |||| || | |||| |||| ||||||||||| || || |||||||| ||||||| || Sbjct 1152 GGAATACAATCATGAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCGTCAGAAAAGC 1211 Query 67894 AACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGT 67953 |||||||| | ||||||| |||||| ||||| || || | || ||||| || | Sbjct 1212 TTCCTTGACCAATTGGATAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAAT 1271 Query 67954 ATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACC-- 68011 |||| ||| |||||||| |||||||| |||||| || ||||||||||| |||||| Sbjct 1272 ATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCA 1331 Query 68012 -ACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCAT 68070 | | | ||| | || | | |||||| | || | | | |||| ||||||| Sbjct 1332 TATAACAAGCT---ACACCAAGTAAGAAGTGTAGAACAATTAACTCATAAGGACCACCAT 1388 Query 68071 TATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTG 68130 | || ||||| ||||| | || || ||||||||||| || || ||||| | ||| || | Sbjct 1389 TGTATAACCATTCATCAACAGAAGCCGCTTCCCAGATTGGGTAAAAGTGCAAACCTATAG 1448 Query 68131 CGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTG 68190 | ||| |||||| || ||||||||||| || ||||| || || | || || || | Sbjct 1449 CCGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAG 1508 Query 68191 CAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGA 68250 ||||||||| | |||||||| ||||| || ||||| || |||||||| || || || | Sbjct 1509 AAACAGGTTCACGAATACCATCAATATCTACCGGAGGGGCAGCAATGAAAGCGATAATAA 1568 Query 68251 AGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGA 68310 | || | ||| | | ||| ||| |||||||| ||||| ||||| |||| || | Sbjct 1569 ATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAA 1628 Query 68311 TGCGATTGTCAACTGAGGTGACCCAGTTACA 68341 || || ||| ||| | ||||||||| Sbjct 1629 GACGGTTTTCAGTGCTGGTTATCCAGTTACA 1659 >seq332406 Length=435 Score = 138 bits (152), Expect = 1e-27 Identities = 206/289 (71%), Gaps = 10/289 (3%) Strand=Plus/Minus Query 67353 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATT 67412 ||| || || | ||||| | |||||||| ||||| ||||||||||||||||||| ||| Sbjct 284 TCAACACCAACTAGGTCTACAGGGAAGTCATGAGCATTACGCTCGTGCATAACTTTCATA 225 Query 67413 CCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCT---GCG 67469 ||||| || | ||||| ||| || ||||||||| ||| || || | || Sbjct 224 CCAAGATTAGCACGGTTAATGATATCAGCCCAAGTATTAATTAC---ACGAGCTTGACTA 168 Query 67470 TCAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCC 67529 ||||| || |||| ||||| || ||||| | | |||||| ||||||| | ||| Sbjct 167 TCAACTACAAATTGATTGAAATTAAAACCATCTAAGTTGAAAGCCATAGCGCTAATACCT 108 Query 67530 ATTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTG--AAGACTTC 67587 | || || ||| | || | || | ||| | ||||| ||||||||||| |||| | Sbjct 107 AAAGCGGTAAACAAAATACCTACTATAGGCCAAGCAGCTAGGAAGAAGTGTAAAGAAT-- 50 Query 67588 TTGAGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCC 67636 || ||||||||| |||||| ||||||||||| || || || || || Sbjct 49 GAGAATTGTTGAAACTTGCATATTGGAAGATCAATCGGCCAAAATAACC 1 >seq181776 Length=4072 Score = 122 bits (134), Expect = 1e-22 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 67632 TATCCATGAGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAG 67691 || |||||||| | ||||| || || || ||||| ||||| ||||| |||||| | Sbjct 3886 TAACCATGAGCGGTTACAATATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACTTTCA 3945 Query 67692 TTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGC 67751 || || || | || || ||||| ||||| | | |||||| || | ||||| ||| Sbjct 3946 TTAACAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGC 4005 Query 67752 ATAGCACTAAAGAGTGAACCACCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGC 67811 |||||||| || || || | ||||||||||| ||||| || | ||| || ||||||||| Sbjct 4006 ATAGCACTGAATAGGGAGCTGCCGAATACACCAGCTACACCTAACATGTGAAATGGGTGC 4065 Query 67812 ATAAGGA 67818 ||||||| Sbjct 4066 ATAAGGA 4072 >seq333312 Length=291 Score = 116 bits (128), Expect = 4e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 67809 TGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCAGAAATA 67868 |||||||||||||||||||| |||||||| || | |||| |||| ||||||||||| || Sbjct 1 TGCATAAGGATGTTGTGCTCAGCTTGGAATACAATCATGAAGTTGAAAGTACCAGAGATT 60 Query 67869 CCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACCAAGAACACAGC 67927 || |||||||| ||||||| || ||||||| | ||||||| |||||| ||||| Sbjct 61 CCTAGAGGCATACCGTCAGAAAAGCTTCCTTGACTAATTGGATAGATCAAGAAAACAGC 119 >seq295831 Length=1525 Score = 116 bits (128), Expect = 4e-21 Identities = 176/249 (71%), Gaps = 6/249 (2%) Strand=Plus/Minus Query 68059 AAGGTCCACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGT 68118 |||| || ||||| || ||||| ||||| | || || ||||||||||| || || |||| Sbjct 1511 AAGGACCTCCATTGTATAACCATTCATCAACAGAAGCCGCTTCCCAGATTGGGTAAAAGT 1452 Query 68119 GAAGACCGATTGCGTTTG---AACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGT 68175 | | ||| || ||| || |||||| || ||||||||||| || ||||| || | Sbjct 1451 GCAAACCTATAA---TTGCAAAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCAT 1395 Query 68176 ACATGAGCGAACCTGCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAA 68235 | | || || || ||||||||| | | |||||| ||||| | ||||| || |||| Sbjct 1394 AAAGTAGGGATCCAAAAACAGGTTCACGAACACCATCAATATCTATCGGAGGGGCAGCAA 1335 Query 68236 TGAATGCAATGATGAAGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGA 68295 |||| || || || || | | ||| | | ||| ||| |||||||| ||| | | Sbjct 1334 TGAAAGCGATAATAAATACAAAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACAACAA 1275 Query 68296 ACCAACCAA 68304 |||| |||| Sbjct 1274 ACCATCCAA 1266 >seq137405 Length=2057 Score = 109 bits (120), Expect = 6e-19 Identities = 331/506 (65%), Gaps = 9/506 (2%) Strand=Plus/Minus Query 67392 CGCTCGTGCATAACTTCCATTCCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGA 67451 ||||| |||||||||| ||| | ||| || ||||| ||| || ||||||||| | Sbjct 1109 CGCTCATGCATAACTTTCATACGAAGATTGGCATGGTTAATGATATCAGCCCAAGTATTA 1050 Query 67452 ATCACTTTACCACCTG---CGTCAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTG 67508 || || || |||| | ||| | || | | ||||| || ||| | || | ||| Sbjct 1049 ATTAC---ACAACCTTGACCATCAGCTACAAAGTAATTGAAATTAAAATCCTTTAAGTTA 993 Query 67509 AATGCCATAGTTGACACACCCATTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCA 67568 || ||| |||| | | | | || || |||| | | | ||| | | ||| | Sbjct 992 AAAGCCGTAGTGCTAATATCTAAGGCGGTAAACCCAGTACCTATTACAAGCCAAGCAACT 933 Query 67569 AGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCG 67628 | |||||||| | | | || ||||||||| | || ||||||||||| || || Sbjct 932 GGAAAGAAGTGTAAAGAACGAGAATTGTTGAAATTTTTATGTTGGAAGATCAATCGGCCA 873 Query 67629 AAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCTT-CTTCTTGTCCGAACTTGTAACC 67687 || || |||| ||| || |||| || || || | || | | ||| |||| | | ||| Sbjct 872 AAATAACCATAAGCGGCTACAACATTATAGGTTTTTTTCCTTTTGATCGAATATATGACC 813 Query 67688 GTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAGAGAAGA-AGTAACAAGAGAAC 67746 | || || | | | || ||| | |||| | | ||| | || | ||| ||| Sbjct 812 TTTATTAACGGATTTATTTTTTGTGGTTGCCTTGATCAAACTAGAGATTATCGAGA-AAC 754 Query 67747 CGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCTACTCCAAGCATATGGAATG 67806 | || |||||||| || || || || |||||||| ||||| || | ||| | ||| Sbjct 753 CATGTATAGCACTGAATAGGGAGCCGTTGAATACACTAGCTACACCTAACATGCGAAATA 694 Query 67807 GGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCAGAAA 67866 |||||||||||||||||||| |||| || | | ||| |||| ||||||| | | Sbjct 693 GGTGCATAAGGATGTTGTGCATAGCTTATAATATAATCATAAAGTTCAAAGTACAGCAGA 634 Query 67867 TACCAAGAGGCATTGCGTCAGAGAAA 67892 | || | |||||| |||| | ||| Sbjct 633 TTCCTAAAGGCATGCGGTCAAAAAAA 608 >seq14652 Length=6210 Score = 93.3 bits (102), Expect = 5e-14 Identities = 100/130 (77%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 67730 AGAAGTAAC-AAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCTA 67788 ||| || || |||| |||| || ||||| ||||| || || || || |||||| |||| Sbjct 915 AGAGGTTACTAAGA-AACCATGTATAGCGCTAAATAGAGAGCCGCCAAATACATTAGCTA 973 Query 67789 CTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGT 67848 | || | ||| || ||| |||||||||||||||||| ||| ||||||| || | | || Sbjct 974 CACCTAACATGTGAAATAGGTGCATAAGGATGTTGTTCTCAACTTGGAATACAATCGTGA 1033 Query 67849 AGTTAAAAGT 67858 |||| ||||| Sbjct 1034 AGTTGAAAGT 1043 >seq303336 Length=741 Score = 89.7 bits (98), Expect = 6e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 68136 GAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACA 68195 ||| |||||| || ||||||||||| || ||||| || || | || || || | || | Sbjct 739 GAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAATA 680 Query 68196 GGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAA 68255 ||||| | |||||||| |||| || |||| | |||||||| | || || || | Sbjct 679 GGTTCACGAATACCATCAATATGTACCAGAGGGGTAGCAATGAAAGTGATAATAAATACA 620 Query 68256 GTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAA 68304 | | ||| | || ||| ||| |||||||| ||||| ||||| |||| Sbjct 619 GAAGTTGCGGTTAGTAAGGTAGGGATCATCAAAACACCAAACCATCCAA 571 >seq366516 Length=3420 Score = 84.2 bits (92), Expect = 2e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 67357 CAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAA 67416 || |||| ||||| ||||||||||| ||||| ||||||||||||||||||||||| |||| Sbjct 2827 CACCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCCATACCAA 2768 Query 67417 G 67417 | Sbjct 2767 G 2767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564140634189000