Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq208788 107 4e-18 seq107409 84.2 4e-11 >seq208788 Length=2051 Score = 107 bits (118), Expect = 4e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 |||||||| | ||||| | || ||||||| || | || ||| || || ||||| || Sbjct 788 ATACCACCACGGAGACGGAGAACCAAATGTAGGGTCGATTCCTTTTGA-ATGTTATAGTC 730 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | || || | || || | || || || |||||||||| ||||| || || || Sbjct 729 AGCAAGAGTACGGCCGTCCTCAAGCTGCTTTCCCGCAAAGATTAGCCTCTGCTGGTCTGG 670 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || ||||| || || || || ||| |||| ||||| || | ||||| ||| Sbjct 669 TGGGATGCCTTCCTTCTCCTGGATCTTAGTTTTGACATTGTCAATTGTGTCTGAGCTTTC 610 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||||||||| || || || ||||| || | ||| |||||||| Sbjct 609 GACCTCAAGAGTAATGGTCTTTCCCGTCAATGTCTTCACAAAAATCTGCAT 559 >seq107409 Length=3443 Score = 84.2 bits (92), Expect = 4e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| || ||||| | || | || | |||| ||| || ||| || ||||| Sbjct 1507 ATGCCACCCCTCAGACGCAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCC 1566 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | |||| || | ||| || ||||| || || |||||||| || || || Sbjct 1567 GCAAGAGTCCTTCCATCCTCAAGTTGCTTCCCAGCGAAAATCAATCTCTGCTGGTCCGGC 1626 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || || |||||| |||| ||| || || Sbjct 1627 GGGATCCCCTCCTTGTCCTGAATCTTTGCCTTCACATTATCGATAGTATCCGAACTCTCC 1686 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || ||||| ||||| || || || | || || | ||||||||||||| Sbjct 1687 ACCTCAAGAGTGATGGTCTTTCCTGTAAGGGTCTTGACAAATATCTGCATT 1737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979484679258750