Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq232842 123 7e-23
seq265288 109 2e-18
seq157704 109 2e-18
seq185790 104 7e-17
seq148157 104 7e-17
seq136752 100 8e-16
seq17435 86.0 2e-11
seq176032 84.2 6e-11
>seq232842
Length=5145
Score = 123 bits (136), Expect = 7e-23
Identities = 337/507 (66%), Gaps = 12/507 (2%)
Strand=Plus/Minus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
|||||||||||| |||| | ||| || | ||| | || || |||||||| || ||
Sbjct 589 CCTATCAAACCTTCCAGGCCTCAGTAAGGCAGAGTCGAGAATGTCTGCTCTGTTAGTCGC 530
Query 288909 TGCCAATACAACAATAG-ATTCGGTTTGCTT-AAATCCATCCATACTTGTTAAAATTTGA 288966
|| | ||| | ||| | | ||| ||| ||| || ||||| |||||||| ||
Sbjct 529 GGCAATTACGATGATACCAGT--GTTACCTTCAAAACCGTCCATTTCTGTTAAAAGCTGG 472
Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026
||||| || ||||| |||||||| ||| || | ||| ||| | | | || ||
Sbjct 471 TTAAGGGTCTGTTCTCTTTCATCGTTTCCTCCCCC--AAT-ACCAGTACCTCT---TTGC 418
Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086
||||||||||||||||| |||| || | | || || | ||| | | || ||
Sbjct 417 CGTCCAACAGCATCAATTTCATCAACAAACACAATGCAAGGCGCATTCTCCTTAGCCTTT 358
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
|| | || | ||||||||| || |||| |||||| ||||||| ||||| ||||||
Sbjct 357 TTGAAAAGATCACGTACACGGGAAGCACCAACTCCAACAAACATTTCGACAAACTCAGAA 298
Query 289147 GCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205
| || | | || | |||| ||| ||||| || || | || | || ||||| ||
Sbjct 297 CCTGAGA-TAGAGAAAAATGGAACACCGGCTTCCCCAGCAATAGCTTTGGCTAGAAGAGT 239
Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265
||| || |||||||| || || | | ||||||||||| || | |||||| | |
Sbjct 238 CTTTCCAGTTCCAGGGGGACCAACAAGAAGAACTCCCTTAGGAATGCGAGCCCCAACTGC 179
Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325
| | ||||||| |||| || || || || | ||| || || | ||||| ||
Sbjct 178 AGTGAACCTCTCAGGTTTCTTCAAGAACTCCACCACCTCCATAAAGTCCTGCTTTGCTTC 119
Query 289326 ATCACATCCTGCTACATCAGCAAAAGT 289352
||| || || || ||| |||| ||
Sbjct 118 ATCTACCCCGGCAACGTCATCAAATGT 92
>seq265288
Length=4004
Score = 109 bits (120), Expect = 2e-18
Identities = 223/327 (68%), Gaps = 6/327 (2%)
Strand=Plus/Plus
Query 289020 CCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCT 289079
|||| | |||||| |||||||| ||||||||||| | | || |||| | || ||
Sbjct 737 CCTTGCTCTACCAATTGCATCAATCTCGTCAATGAATACTATACTTGGAGCACACTGCCT 796
Query 289080 CGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACA 289137
|| || | |||||| | || || | ||||| ||||| ||| ||| |||| || | |
Sbjct 797 TGC--TTCCTGAAATAAGTTCCTAACCCTGGATGGTCCAACACCCACAAACATCTCCATA 854
Query 289138 AATTCAGAAGCGGATACTTGAATGAAT-GTTACATTTGCTTCGCCTGCTACTGCCCTCGC 289196
|| || ||| | |||| |||| ||| | ||| | ||| ||||| || | ||
Sbjct 855 AAATCTGAACCAGATA-TTGATAGAAAAGGCACACCAGATTCTCCTGCGGTAGCTTTTGC 913
Query 289197 CAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC 289256
||||| ||||| ||||||||||| || || | || ||| |||| || || | ||||||
Sbjct 914 TAGAAGGGTCTTTCCTGTTCCAGGAGGGCCTACCAACAGAGCTCCTTTAGGAATTTTTGC 973
Query 289257 CCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATA 289316
|| || ||||||| ||| |||| | || | |||| ||| | || |
Sbjct 974 TCCCAATTCCTCGTATTTCTTTGGGTTCTTGAGGAAGTGCACAAACTCCATGATCTCTTG 1033
Query 289317 TTTTGCCTCATCACATCCTGCTACATC 289343
|||||||||||||| || || |||||
Sbjct 1034 CTTTGCCTCATCACAACCAGCAACATC 1060
>seq157704
Length=4603
Score = 109 bits (120), Expect = 2e-18
Identities = 214/314 (68%), Gaps = 2/314 (1%)
Strand=Plus/Plus
Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624
||| || || |||||| || | || | ||||| || || ||||| ||| || ||
Sbjct 1680 CATTATATCCTCCATAGCTTTCACCAATCTCCGCTGGATGTACCCAGTCTCAGAAGTCTT 1739
Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
|| || ||||| || ||||| | | |||||||||||| || || || | ||| | ||
Sbjct 1740 CACTGCAGTATCTATAAGACCTTCTCTACCACCCATAGCGTGAAAAAAGAACTCCTGAGG 1799
Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744
|| || | | | | ||| ||||||| || ||||| || ||| || ||
Sbjct 1800 AGTCAGTCCTCGCAGATATGAGTTCTCAACAAAGCCACGACTTTCTGGCCCATAATCATC 1859
Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCT-CATAGCCGTATGGGATACGCTTTCCATCAA 302803
|||||||||||| |||| || | | ||| | | || || || || ||||| || ||||
Sbjct 1860 CTTGGTAAAGTGGGGCAATGTTC-GATCTATAAATCCATAGGGAATTCGCTTGCCCTCAA 1918
Query 302804 CGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGC 302863
| || ||||| |||| || | | ||||||| || ||||| | ||| || ||||| |
Sbjct 1919 CATTTTGCTGCCCCACACAAGCAGTCATCTGTGAGATATTAATGAAACTCCCTTTGGATC 1978
Query 302864 CAGCATTTACCATA 302877
| ||| | ||||||
Sbjct 1979 CTGCAGTAACCATA 1992
Score = 89.7 bits (98), Expect = 2e-12
Identities = 112/148 (76%), Gaps = 7/148 (5%)
Strand=Plus/Plus
Query 301815 AATTTCT-TCAATACGGGGAACACCACGGGTTACGTTAGACTTGG-ACGCAACACCAGCA 301872
||||||| |||| | ||||||||| || || || ||||| || || ||||||||
Sbjct 912 AATTTCTCTCAAC-CTGGGAACACCTAAAGTAACATT---CTTGGCACTCA-CACCAGCA 966
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
||||||| ||||| ||||| | ||||| | ||||||||||| |||||| ||||
Sbjct 967 TAGTGGAATGTATTGAGAGTCATCTGAGTCGCAGGCTCACCAATCGATTGTGCAGCAACA 1026
Query 301933 ATACCAACCATTTCTCCTGGTGCTACAA 301960
||||| ||||||||| || |||||||
Sbjct 1027 CAACCAATCATTTCTCCAGGGGCTACAA 1054
>seq185790
Length=5091
Score = 104 bits (114), Expect = 7e-17
Identities = 159/223 (71%), Gaps = 9/223 (4%)
Strand=Plus/Minus
Query 156049 TACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105
|||| |||||||| || ||| ||||| |||||||||||||| | |||||| || | ||
Sbjct 2540 TACCTTTCCTCTTCCCTCCCCCTTGATCAACATACCGAGCAGTGTCATTGAACACCCGTA 2481
Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAAC--CAGAT-G 156162
|||| |||| ||| ||||| || || ||||| ||||| ||||||| ||| | || |
Sbjct 2480 GCATTGGAACAATGCCATTAGATGTCCCATTTGTTCCCCGAATAT---AACTTCCCATCG 2424
Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222
|||||| ||| |||| | ||||| || || | ||||| || || || |
Sbjct 2423 AGCGAATATTGTGAACTGAGACACCAATTCCTCCAGCTGATTTACTTATAACTGCACACT 2364
Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
|||| | || | | | || |||||||| |||||||| |||
Sbjct 2363 CCTTCAAGGTGTCGTATATGCCTTCAATGCTATCATCTTTCAT 2321
>seq148157
Length=1173
Score = 104 bits (114), Expect = 7e-17
Identities = 222/327 (68%), Gaps = 6/327 (2%)
Strand=Plus/Plus
Query 289020 CCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCT 289079
|||| | |||||| |||||||| ||||||||||| | | || |||| | || ||
Sbjct 21 CCTTGCTCTACCAATTGCATCAATCTCGTCAATGAATACTATACTTGGAGCACACTGCCT 80
Query 289080 CGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACA 289137
|| || | |||||| | || || | ||||| ||||| ||| ||| |||| || |
Sbjct 81 TGC--TTCCTGAAATAAGTTCCTAACCCTGGATGGTCCAACACCCACAAACATCTCCATG 138
Query 289138 AATTCAGAAGCGGATACTTGAATGAAT-GTTACATTTGCTTCGCCTGCTACTGCCCTCGC 289196
|| || ||| | |||| | || ||| | ||| | ||| ||||| || | ||
Sbjct 139 AAATCCGAACCAGATA-TCGATAGAAAAGGCACACCAGATTCCCCTGCGGTAGCTTTTGC 197
Query 289197 CAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC 289256
||||| ||||| |||||||| ||||| || | || ||| | || || || | ||||||
Sbjct 198 TAGAAGGGTCTTTCCTGTTCCTGGTGGGCCTACCAACAGAGCCCCTTTGGGAATTTTTGC 257
Query 289257 CCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATA 289316
|| || ||||||| |||||||| | || | |||| ||| | || |
Sbjct 258 TCCCAATTCCTCGTATTTCTTTGGGCTCTTAAGGAAGTGCACAAACTCCATGATCTCCTG 317
Query 289317 TTTTGCCTCATCACATCCTGCTACATC 289343
|||||||||||||| || ||||||||
Sbjct 318 CTTTGCCTCATCACAACCAGCTACATC 344
>seq136752
Length=4609
Score = 100 bits (110), Expect = 8e-16
Identities = 210/313 (67%), Gaps = 0/313 (0%)
Strand=Plus/Plus
Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624
||| || || |||||| || | || | ||||| || || ||||| ||| || ||
Sbjct 1680 CATTATATCCTCCATAGCTTTCACCAATCTCCGCTGGATGTACCCAGTCTCAGAAGTCTT 1739
Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684
|| || ||||| || ||||| | | |||||||||||| || || || | ||| | ||
Sbjct 1740 CACTGCAGTATCTATAAGACCTTCTCTACCACCCATAGCGTGAAAAAAGAACTCCTGTGG 1799
Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744
|| || | | | | ||| ||||||| |||||||| || ||| || ||
Sbjct 1800 AGTCAGTCCTCGCAGATATGAGTTCTCAACAAAACCACGACTTTCTGGCCCATAATCATC 1859
Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804
||||||||||| |||| || | || | | || || || || ||||| || |||||
Sbjct 1860 TTTGGTAAAGTGGGGCAATGTTCGGTCTATAAACCCATAGGGAATTCGCTTGCCCTCAAC 1919
Query 302805 GTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864
|| ||||| || | || | | ||||||| || ||||| | ||| || || || ||
Sbjct 1920 ATTTTGCTGCCCTACACAAGCAGTCATCTGTGAGATATTAATGAAACTTCCTTTAGATCC 1979
Query 302865 AGCATTTACCATA 302877
||| | ||||||
Sbjct 1980 TGCAGTAACCATA 1992
Score = 89.7 bits (98), Expect = 2e-12
Identities = 112/148 (76%), Gaps = 7/148 (5%)
Strand=Plus/Plus
Query 301815 AATTTCT-TCAATACGGGGAACACCACGGGTTACGTTAGACTTGG-ACGCAACACCAGCA 301872
||||||| |||| | ||||||||| || || || ||||| || || ||||||||
Sbjct 912 AATTTCTCTCAAC-CTGGGAACACCTAAAGTAACATT---CTTGGCACTCA-CACCAGCA 966
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
||||||| ||||| ||||| | ||||| | ||||||||||| |||||| ||||
Sbjct 967 TAGTGGAATGTATTGAGAGTCATCTGAGTCGCAGGCTCACCAATCGATTGTGCAGCAACA 1026
Query 301933 ATACCAACCATTTCTCCTGGTGCTACAA 301960
||||| ||||||||| || |||||||
Sbjct 1027 CAACCAATCATTTCTCCAGGGGCTACAA 1054
>seq17435
Length=4377
Score = 86.0 bits (94), Expect = 2e-11
Identities = 188/276 (68%), Gaps = 8/276 (3%)
Strand=Plus/Minus
Query 288946 TCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAA 289005
||||| |||||||| || ||||| || ||||| ||||||| ||| || | ||
Sbjct 1151 TCCATCTCTGTTAAAAGCTGGTTAAGGGTCTGTTCTCTTTCATTGTTTCCTCCCCC--AA 1094
Query 289006 TCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACAC 289065
| ||| | | |||| || ||||||||||||||||| |||| || | | ||
Sbjct 1093 T-ACCAGTACCGCT---TTGCCATCCAACAGCATCAATTTCATCAACAAACACAATGCAA 1038
Query 289066 GGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACA 289125
|| | ||| | | || || || | || | ||||||||| || ||| ||||||
Sbjct 1037 GGCGCATTCTCCTTGGCCTTTTTGAAAAGATCACGTACACGGGAAGCATCAACTCCAACA 978
Query 289126 TACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGC 289184
||||||| || || |||||| | || | | || | |||| ||| ||||| || ||
Sbjct 977 AACATTTCGACGAACTCAGAACCTGAGA-TAGAGAAAAATGGAACACCAGCTTCCCCAGC 919
Query 289185 TACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGG 289220
| |||| | || ||||| ||||| || ||||||||
Sbjct 918 AATTGCCTTGGCTAGAAGAGTCTTTCCAGTTCCAGG 883
>seq176032
Length=2213
Score = 84.2 bits (92), Expect = 6e-11
Identities = 111/148 (75%), Gaps = 7/148 (5%)
Strand=Plus/Minus
Query 301815 AATTTCT-TCAATACGGGGAACACCACGGGTTACGTTAGACTTGG-ACGCAACACCAGCA 301872
||||||| |||| | ||||||||| || || || ||||| || || ||||||||
Sbjct 738 AATTTCTCTCAAC-CTGGGAACACCTAACGTAACATT---CTTGGCACTCA-CACCAGCA 684
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
||||||| ||||||||||| | ||||| | ||||||||||| ||||| ||||
Sbjct 683 TAGTGGAAGGTATTCAGAGTCATCTGAGTTGCAGGCTCACCAATCGACTGTGCAGCAACA 624
Query 301933 ATACCAACCATTTCTCCTGGTGCTACAA 301960
||||| |||||| || || |||||||
Sbjct 623 CAACCAATCATTTCCCCAGGGGCTACAA 596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1464349494010425
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