Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq232842 123 7e-23 seq265288 109 2e-18 seq157704 109 2e-18 seq185790 104 7e-17 seq148157 104 7e-17 seq136752 100 8e-16 seq17435 86.0 2e-11 seq176032 84.2 6e-11 >seq232842 Length=5145 Score = 123 bits (136), Expect = 7e-23 Identities = 337/507 (66%), Gaps = 12/507 (2%) Strand=Plus/Minus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 |||||||||||| |||| | ||| || | ||| | || || |||||||| || || Sbjct 589 CCTATCAAACCTTCCAGGCCTCAGTAAGGCAGAGTCGAGAATGTCTGCTCTGTTAGTCGC 530 Query 288909 TGCCAATACAACAATAG-ATTCGGTTTGCTT-AAATCCATCCATACTTGTTAAAATTTGA 288966 || | ||| | ||| | | ||| ||| ||| || ||||| |||||||| || Sbjct 529 GGCAATTACGATGATACCAGT--GTTACCTTCAAAACCGTCCATTTCTGTTAAAAGCTGG 472 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026 ||||| || ||||| |||||||| ||| || | ||| ||| | | | || || Sbjct 471 TTAAGGGTCTGTTCTCTTTCATCGTTTCCTCCCCC--AAT-ACCAGTACCTCT---TTGC 418 Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086 ||||||||||||||||| |||| || | | || || | ||| | | || || Sbjct 417 CGTCCAACAGCATCAATTTCATCAACAAACACAATGCAAGGCGCATTCTCCTTAGCCTTT 358 Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146 || | || | ||||||||| || |||| |||||| ||||||| ||||| |||||| Sbjct 357 TTGAAAAGATCACGTACACGGGAAGCACCAACTCCAACAAACATTTCGACAAACTCAGAA 298 Query 289147 GCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205 | || | | || | |||| ||| ||||| || || | || | || ||||| || Sbjct 297 CCTGAGA-TAGAGAAAAATGGAACACCGGCTTCCCCAGCAATAGCTTTGGCTAGAAGAGT 239 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265 ||| || |||||||| || || | | ||||||||||| || | |||||| | | Sbjct 238 CTTTCCAGTTCCAGGGGGACCAACAAGAAGAACTCCCTTAGGAATGCGAGCCCCAACTGC 179 Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 | | ||||||| |||| || || || || | ||| || || | ||||| || Sbjct 178 AGTGAACCTCTCAGGTTTCTTCAAGAACTCCACCACCTCCATAAAGTCCTGCTTTGCTTC 119 Query 289326 ATCACATCCTGCTACATCAGCAAAAGT 289352 ||| || || || ||| |||| || Sbjct 118 ATCTACCCCGGCAACGTCATCAAATGT 92 >seq265288 Length=4004 Score = 109 bits (120), Expect = 2e-18 Identities = 223/327 (68%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 289020 CCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCT 289079 |||| | |||||| |||||||| ||||||||||| | | || |||| | || || Sbjct 737 CCTTGCTCTACCAATTGCATCAATCTCGTCAATGAATACTATACTTGGAGCACACTGCCT 796 Query 289080 CGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACA 289137 || || | |||||| | || || | ||||| ||||| ||| ||| |||| || | | Sbjct 797 TGC--TTCCTGAAATAAGTTCCTAACCCTGGATGGTCCAACACCCACAAACATCTCCATA 854 Query 289138 AATTCAGAAGCGGATACTTGAATGAAT-GTTACATTTGCTTCGCCTGCTACTGCCCTCGC 289196 || || ||| | |||| |||| ||| | ||| | ||| ||||| || | || Sbjct 855 AAATCTGAACCAGATA-TTGATAGAAAAGGCACACCAGATTCTCCTGCGGTAGCTTTTGC 913 Query 289197 CAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC 289256 ||||| ||||| ||||||||||| || || | || ||| |||| || || | |||||| Sbjct 914 TAGAAGGGTCTTTCCTGTTCCAGGAGGGCCTACCAACAGAGCTCCTTTAGGAATTTTTGC 973 Query 289257 CCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATA 289316 || || ||||||| ||| |||| | || | |||| ||| | || | Sbjct 974 TCCCAATTCCTCGTATTTCTTTGGGTTCTTGAGGAAGTGCACAAACTCCATGATCTCTTG 1033 Query 289317 TTTTGCCTCATCACATCCTGCTACATC 289343 |||||||||||||| || || ||||| Sbjct 1034 CTTTGCCTCATCACAACCAGCAACATC 1060 >seq157704 Length=4603 Score = 109 bits (120), Expect = 2e-18 Identities = 214/314 (68%), Gaps = 2/314 (1%) Strand=Plus/Plus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 ||| || || |||||| || | || | ||||| || || ||||| ||| || || Sbjct 1680 CATTATATCCTCCATAGCTTTCACCAATCTCCGCTGGATGTACCCAGTCTCAGAAGTCTT 1739 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 || || ||||| || ||||| | | |||||||||||| || || || | ||| | || Sbjct 1740 CACTGCAGTATCTATAAGACCTTCTCTACCACCCATAGCGTGAAAAAAGAACTCCTGAGG 1799 Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744 || || | | | | ||| ||||||| || ||||| || ||| || || Sbjct 1800 AGTCAGTCCTCGCAGATATGAGTTCTCAACAAAGCCACGACTTTCTGGCCCATAATCATC 1859 Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCT-CATAGCCGTATGGGATACGCTTTCCATCAA 302803 |||||||||||| |||| || | | ||| | | || || || || ||||| || |||| Sbjct 1860 CTTGGTAAAGTGGGGCAATGTTC-GATCTATAAATCCATAGGGAATTCGCTTGCCCTCAA 1918 Query 302804 CGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGC 302863 | || ||||| |||| || | | ||||||| || ||||| | ||| || ||||| | Sbjct 1919 CATTTTGCTGCCCCACACAAGCAGTCATCTGTGAGATATTAATGAAACTCCCTTTGGATC 1978 Query 302864 CAGCATTTACCATA 302877 | ||| | |||||| Sbjct 1979 CTGCAGTAACCATA 1992 Score = 89.7 bits (98), Expect = 2e-12 Identities = 112/148 (76%), Gaps = 7/148 (5%) Strand=Plus/Plus Query 301815 AATTTCT-TCAATACGGGGAACACCACGGGTTACGTTAGACTTGG-ACGCAACACCAGCA 301872 ||||||| |||| | ||||||||| || || || ||||| || || |||||||| Sbjct 912 AATTTCTCTCAAC-CTGGGAACACCTAAAGTAACATT---CTTGGCACTCA-CACCAGCA 966 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||| ||||| ||||| | ||||| | ||||||||||| |||||| |||| Sbjct 967 TAGTGGAATGTATTGAGAGTCATCTGAGTCGCAGGCTCACCAATCGATTGTGCAGCAACA 1026 Query 301933 ATACCAACCATTTCTCCTGGTGCTACAA 301960 ||||| ||||||||| || ||||||| Sbjct 1027 CAACCAATCATTTCTCCAGGGGCTACAA 1054 >seq185790 Length=5091 Score = 104 bits (114), Expect = 7e-17 Identities = 159/223 (71%), Gaps = 9/223 (4%) Strand=Plus/Minus Query 156049 TACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| |||||||| || ||| ||||| |||||||||||||| | |||||| || | || Sbjct 2540 TACCTTTCCTCTTCCCTCCCCCTTGATCAACATACCGAGCAGTGTCATTGAACACCCGTA 2481 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAAC--CAGAT-G 156162 |||| |||| ||| ||||| || || ||||| ||||| ||||||| ||| | || | Sbjct 2480 GCATTGGAACAATGCCATTAGATGTCCCATTTGTTCCCCGAATAT---AACTTCCCATCG 2424 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222 |||||| ||| |||| | ||||| || || | ||||| || || || | Sbjct 2423 AGCGAATATTGTGAACTGAGACACCAATTCCTCCAGCTGATTTACTTATAACTGCACACT 2364 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 |||| | || | | | || |||||||| |||||||| ||| Sbjct 2363 CCTTCAAGGTGTCGTATATGCCTTCAATGCTATCATCTTTCAT 2321 >seq148157 Length=1173 Score = 104 bits (114), Expect = 7e-17 Identities = 222/327 (68%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 289020 CCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCT 289079 |||| | |||||| |||||||| ||||||||||| | | || |||| | || || Sbjct 21 CCTTGCTCTACCAATTGCATCAATCTCGTCAATGAATACTATACTTGGAGCACACTGCCT 80 Query 289080 CGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACA 289137 || || | |||||| | || || | ||||| ||||| ||| ||| |||| || | Sbjct 81 TGC--TTCCTGAAATAAGTTCCTAACCCTGGATGGTCCAACACCCACAAACATCTCCATG 138 Query 289138 AATTCAGAAGCGGATACTTGAATGAAT-GTTACATTTGCTTCGCCTGCTACTGCCCTCGC 289196 || || ||| | |||| | || ||| | ||| | ||| ||||| || | || Sbjct 139 AAATCCGAACCAGATA-TCGATAGAAAAGGCACACCAGATTCCCCTGCGGTAGCTTTTGC 197 Query 289197 CAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC 289256 ||||| ||||| |||||||| ||||| || | || ||| | || || || | |||||| Sbjct 198 TAGAAGGGTCTTTCCTGTTCCTGGTGGGCCTACCAACAGAGCCCCTTTGGGAATTTTTGC 257 Query 289257 CCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATA 289316 || || ||||||| |||||||| | || | |||| ||| | || | Sbjct 258 TCCCAATTCCTCGTATTTCTTTGGGCTCTTAAGGAAGTGCACAAACTCCATGATCTCCTG 317 Query 289317 TTTTGCCTCATCACATCCTGCTACATC 289343 |||||||||||||| || |||||||| Sbjct 318 CTTTGCCTCATCACAACCAGCTACATC 344 >seq136752 Length=4609 Score = 100 bits (110), Expect = 8e-16 Identities = 210/313 (67%), Gaps = 0/313 (0%) Strand=Plus/Plus Query 302565 CATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTT 302624 ||| || || |||||| || | || | ||||| || || ||||| ||| || || Sbjct 1680 CATTATATCCTCCATAGCTTTCACCAATCTCCGCTGGATGTACCCAGTCTCAGAAGTCTT 1739 Query 302625 TACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGG 302684 || || ||||| || ||||| | | |||||||||||| || || || | ||| | || Sbjct 1740 CACTGCAGTATCTATAAGACCTTCTCTACCACCCATAGCGTGAAAAAAGAACTCCTGTGG 1799 Query 302685 TCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAA 302744 || || | | | | ||| ||||||| |||||||| || ||| || || Sbjct 1800 AGTCAGTCCTCGCAGATATGAGTTCTCAACAAAACCACGACTTTCTGGCCCATAATCATC 1859 Query 302745 CTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAAC 302804 ||||||||||| |||| || | || | | || || || || ||||| || ||||| Sbjct 1860 TTTGGTAAAGTGGGGCAATGTTCGGTCTATAAACCCATAGGGAATTCGCTTGCCCTCAAC 1919 Query 302805 GTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 || ||||| || | || | | ||||||| || ||||| | ||| || || || || Sbjct 1920 ATTTTGCTGCCCTACACAAGCAGTCATCTGTGAGATATTAATGAAACTTCCTTTAGATCC 1979 Query 302865 AGCATTTACCATA 302877 ||| | |||||| Sbjct 1980 TGCAGTAACCATA 1992 Score = 89.7 bits (98), Expect = 2e-12 Identities = 112/148 (76%), Gaps = 7/148 (5%) Strand=Plus/Plus Query 301815 AATTTCT-TCAATACGGGGAACACCACGGGTTACGTTAGACTTGG-ACGCAACACCAGCA 301872 ||||||| |||| | ||||||||| || || || ||||| || || |||||||| Sbjct 912 AATTTCTCTCAAC-CTGGGAACACCTAAAGTAACATT---CTTGGCACTCA-CACCAGCA 966 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||| ||||| ||||| | ||||| | ||||||||||| |||||| |||| Sbjct 967 TAGTGGAATGTATTGAGAGTCATCTGAGTCGCAGGCTCACCAATCGATTGTGCAGCAACA 1026 Query 301933 ATACCAACCATTTCTCCTGGTGCTACAA 301960 ||||| ||||||||| || ||||||| Sbjct 1027 CAACCAATCATTTCTCCAGGGGCTACAA 1054 >seq17435 Length=4377 Score = 86.0 bits (94), Expect = 2e-11 Identities = 188/276 (68%), Gaps = 8/276 (3%) Strand=Plus/Minus Query 288946 TCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAA 289005 ||||| |||||||| || ||||| || ||||| ||||||| ||| || | || Sbjct 1151 TCCATCTCTGTTAAAAGCTGGTTAAGGGTCTGTTCTCTTTCATTGTTTCCTCCCCC--AA 1094 Query 289006 TCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACAC 289065 | ||| | | |||| || ||||||||||||||||| |||| || | | || Sbjct 1093 T-ACCAGTACCGCT---TTGCCATCCAACAGCATCAATTTCATCAACAAACACAATGCAA 1038 Query 289066 GGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACA 289125 || | ||| | | || || || | || | ||||||||| || ||| |||||| Sbjct 1037 GGCGCATTCTCCTTGGCCTTTTTGAAAAGATCACGTACACGGGAAGCATCAACTCCAACA 978 Query 289126 TACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGC 289184 ||||||| || || |||||| | || | | || | |||| ||| ||||| || || Sbjct 977 AACATTTCGACGAACTCAGAACCTGAGA-TAGAGAAAAATGGAACACCAGCTTCCCCAGC 919 Query 289185 TACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGG 289220 | |||| | || ||||| ||||| || |||||||| Sbjct 918 AATTGCCTTGGCTAGAAGAGTCTTTCCAGTTCCAGG 883 >seq176032 Length=2213 Score = 84.2 bits (92), Expect = 6e-11 Identities = 111/148 (75%), Gaps = 7/148 (5%) Strand=Plus/Minus Query 301815 AATTTCT-TCAATACGGGGAACACCACGGGTTACGTTAGACTTGG-ACGCAACACCAGCA 301872 ||||||| |||| | ||||||||| || || || ||||| || || |||||||| Sbjct 738 AATTTCTCTCAAC-CTGGGAACACCTAACGTAACATT---CTTGGCACTCA-CACCAGCA 684 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||| ||||||||||| | ||||| | ||||||||||| ||||| |||| Sbjct 683 TAGTGGAAGGTATTCAGAGTCATCTGAGTTGCAGGCTCACCAATCGACTGTGCAGCAACA 624 Query 301933 ATACCAACCATTTCTCCTGGTGCTACAA 301960 ||||| |||||| || || ||||||| Sbjct 623 CAACCAATCATTTCCCCAGGGGCTACAA 596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1464349494010425