Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq97145 228 1e-53 seq167436 214 2e-49 seq237122 138 1e-26 seq265020 136 5e-26 >seq97145 Length=990 Score = 228 bits (252), Expect = 1e-53 Identities = 227/294 (77%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||||||||| ||||| | | |||| || ||||| Sbjct 79 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGCGCCTCCGCGACTTGA 138 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 |||||||||||||||| ||||| ||||||||| ||||| |||||| ||||||||| Sbjct 139 ACCTCCTTCATGAACCTCCCGGCGAGGTTCTCGAGTACGATTCCGTCGGAGGCGGCGAAG 198 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || |||||||| |||| ||||| |||||||| | | || | | | ||| Sbjct 199 AAGGCGAGGACGTGGCTGATGAAGTGCTTCTCGTCGTGGGTCAGGGCTTCAAACTGGCGA 258 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 | || | ||||||||| |||||||||||||||| ||||||||||| || |||||| Sbjct 259 ATATCCTGGGAGAGGTCCACTTCCTCGGCGGTCCAGAAGGAGGCCTCGGCTTTCTTGTAC 318 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTG 869926 || ||||| | || |||| |||| ||||| | | || |||| |||||| Sbjct 319 ATTTCCCAGATTTCTGGGTACTGGATTGGGAACATGCAGAACCGGTCTGGGTTG 372 >seq167436 Length=640 Score = 214 bits (236), Expect = 2e-49 Identities = 231/300 (77%), Gaps = 12/300 (4%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| ||| |||||||||||||||| ||||| | | |||| || ||||| Sbjct 115 GAGTGGATGTTCTCAATGCCGATCTGGAAGCCGTAGAAGGCGCGCGCCTCCGCGACTTGA 174 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 |||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||| Sbjct 175 ACCTCCTTCATGAACCTCCCGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCGGCGAAA 234 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || ||||| || |||| ||||| ||||||| | | || | | | | |||| Sbjct 235 AAGGCGAGGACATGGGTGATGAAGTGCTTCTCGTCGGGGGTTAG-GGCTTCGAACTGACG 293 Query 869813 G-TGTCGGCGCTG----AGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | |||| ||| || || || |||||||||||||||| ||||||||||| || | Sbjct 294 GATGTC----CTGAGAAAGATCGACTTCCTCGGCGGTCCAGAAAGAGGCCTCGGCTTTCT 349 Query 869868 TGTACATCTCCCATACTTGCTGG-TAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTG 869926 ||||||| ||||| | || |||| || |||| ||||| | | ||||||| |||||| Sbjct 350 TGTACATTTCCCAGA-TTTCTGGATACTGGATTGGGAACATGCAGAAGCGGTCCGGGTTG 408 >seq237122 Length=485 Score = 138 bits (152), Expect = 1e-26 Identities = 233/330 (71%), Gaps = 8/330 (2%) Strand=Plus/Minus Query 868678 GGACGAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCC 868737 |||| |||| ||||| |||||| || || ||| |||||| ||||||||||| || Sbjct 483 GGACATGACGGAGGCCTTCTGGTACTCCCCGACCCGCTTCTCGAAGAAGTTGGTCTTCCC 424 Query 868738 CTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGG--CGTCTTGTAGTGCTTTTCG 868795 || | |||||||| ||||||||| |||||||| | | | | || ||| || Sbjct 423 CTGCAACGAGATCAGCTCCATCCAATCAAACGGGTTCTGAACACCATATAC--CTTCCCG 366 Query 868796 CATCCGAGCGA-CGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCC 868854 | || |||| ||| | ||| || ||||| || |||||||||||||||| ||| | | Sbjct 365 TACCCTAGCGCTCGCAA-CAGCCGATCGGCAACGAACTCGATGTACTGGCTCATCAACGC 307 Query 868855 GGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTC 868914 ||||||| |||| | ||| |||||||| |||| |||||||| |||||||||| Sbjct 306 ACCGTTCATCCCGACCAACGCGCACGGCAGCGCGTCGCAGACAAACTCCCTCTCGATCTC 247 Query 868915 GACGGCCTCGACGATGATCTGCCTGGGCACG-TCGGCCGAGGGCTTGTTGACGAGCATCG 868973 || || ||| | |||| |||| | | || || | |||| || || | | Sbjct 246 CACCGCGTCGCGAACGATC-GCCTTGACTCGCTCCTCGCTCAGCTTCTTTCTCAGGAGGG 188 Query 868974 TGTAGAGCAGGCAGGCAAAGTCGCAGTGCA 869003 ||| |||||||| |||||||||||||||| Sbjct 187 AGTAAAGCAGGCAAGCAAAGTCGCAGTGCA 158 Score = 129 bits (142), Expect = 7e-24 Identities = 122/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||||||||| || ||||| |||||| |||| ||| || ||||||||||| || || Sbjct 156 ACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATGAGGCCTCGTTT 97 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| || ||||||||||| || || ||||| ||||| || |||||| ||| || Sbjct 96 CTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACGCAGGCGAA 37 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTC 869334 | |||| || |||||||| |||| ||| ||| || Sbjct 36 GGCGATCAGACGCTCGGCGAAGGACTCGGAGCCGTC 1 >seq265020 Length=820 Score = 136 bits (150), Expect = 5e-26 Identities = 228/327 (70%), Gaps = 2/327 (1%) Strand=Plus/Minus Query 868678 GGACGAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCC 868737 |||| |||| ||||| |||||| || || | | |||||| ||||||||||| || Sbjct 483 GGACATGACGGAGGCCTTCTGGTACTCCCCGACCCTCTTCTCGAAGAAGTTGGTCTTCCC 424 Query 868738 CTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCA 868797 || | |||||||| ||||||||| |||||||| | ||| ||| || | Sbjct 423 CTGCAACGAGATCAGCTCCATCCAATCAAACGGGTTCTGAACACCGTACACCTTCCCGTA 364 Query 868798 TCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGC 868857 || |||| | | ||| ||||||||||| ||||||||||| || | ||| | | || | Sbjct 363 CCCTAGCGCACCCAACAGCCGGTCGGCGACGAACTCGATGTATTGACTCATCAAGGCGCC 304 Query 868858 GTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGAC 868917 |||||| |||| | ||| || |||| |||| ||||||||| |||||||||| || Sbjct 303 GTTCATCCCGACCAACGCACATGGTAGCGCGTCGCACACAAACTCCCTCTCGATCTCCAC 244 Query 868918 GGCCTCGACGATGATCTGCCTGGGCACG-TCGGCCGAGGGCTTGTTGACGAGCATCGTGT 868976 || ||| || ||| |||| | | || || | |||| || || | || || Sbjct 243 CGCGTCGCGGACGAT-AGCCTTGACTCGCTCCTCGCTCAGCTTCTTCCTCAGAAGCGAGT 185 Query 868977 AGAGCAGGCAGGCAAAGTCGCAGTGCA 869003 | || |||||||| || |||||||||| Sbjct 184 AAAGAAGGCAGGCGAAATCGCAGTGCA 158 Score = 127 bits (140), Expect = 2e-23 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 |||||||| || ||||| |||||| |||| ||| || ||||||||||| || ||| Sbjct 155 CCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATGAGGCCTCGTTTC 96 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| || ||||||||||| || || ||||| ||||| || |||||| ||| ||| Sbjct 95 TTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACGCAGGCGAAG 36 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTC 869334 |||| || |||||||| |||| ||| ||| || Sbjct 35 GCGATCAGACGCTCGGCGAAGGACTCGGAGCCGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6074639533914925