Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq86164 87.8 1e-12 seq154533 82.4 6e-11 >seq86164 Length=2128 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA--GC-CT 110329 ||||| || ||||| |||||| | ||||| || ||||| ||| |||| ||| || || Sbjct 332 ATGCAGATCTTTGTGAAAACTCTTACCGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 273 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || ||| | | || ||| ||||| ||||| || || | ||| || Sbjct 272 GAC---ACCATCGACAATGTCAAAGCTAAGATCCAAGACAAGGAGGGTATTCCCCCAGAC 216 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || || || | || || || ||||| ||||| | | |||| | || |||||| Sbjct 215 CAGCAGAGGCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTTGCTGATTAC 156 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||||||||| || |||||| | || ||||| Sbjct 155 AACATTCAAAAGGAGTCTACGCTCCATTTGGTG 123 >seq154533 Length=826 Score = 82.4 bits (90), Expect = 6e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 110357 AAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAA 110416 |||||| ||||| || ||| | || || || || |||||||||| ||| ||||| Sbjct 271 AAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAGCAGAGACTTATTTTTGCTGGTAAG 330 Query 110417 CAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCAC 110476 ||||| ||||||| || || ||||||||||||| || || || || ||||| ||||| Sbjct 331 CAGCTCGAGGATGGGAGGACTCTGGCGGATTACAATATCCAGAAGGAGTCTACCCTGCAC 390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410848997440325