Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09]
396,025 sequences; 631,307,653 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq97145 161 2e-33
seq237122 152 8e-31
seq167436 147 3e-29
seq265020 134 2e-25
seq171845 125 1e-22
seq97558 120 5e-21
>seq97145
Length=990
Score = 161 bits (178), Expect = 2e-33
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||| | ||||| |||||||||||||| | ||||| |||||||| ||||| |||
Sbjct 124 GCCTCCGCGACTTGAACCTCCTTCATGAACCTCCCGGCGAGGTTCTCGAGTACGATTCCG 183
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
||| ||||||||| |||||||||||||| |||| ||||| |||||||| | | ||
Sbjct 184 TCGGAGGCGGCGAAGAAGGCGAGGACGTGGCTGATGAAGTGCTTCTCGTCGTGGGTCAGG 243
Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329
| | | ||| | || | |||||| || |||||||||||||| |||||||||
Sbjct 244 GCTTCAAACTGGCGAATATCCTGGGAGAGGTCCACTTCCTCGGCGGTCCAGAAGGAGGCC 303
Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378
||||| || |||||||| ||||| || | |||| |||| |||||||
Sbjct 304 TCGGCTTTCTTGTACATTTCCCAGATTTCTGGGTACTGGATTGGGAACA 352
Score = 98.7 bits (108), Expect = 2e-14
Identities = 92/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 794548 GTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATG 794607
|||||||||||| | |||||| || ||||||| | | |||||||| || | || |
Sbjct 1 GTGTCGATGGCGTGGAAGAGGCGGGTCTTCTCGGCGGAGTCCTTGATATACGACTCCAGA 60
Query 794608 AGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAG 794664
||||| ||| |||| ||||||||||| |||||||||||||||||||| || |||
Sbjct 61 AGGAGGCTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAG 117
>seq237122
Length=485
Score = 152 bits (168), Expect = 8e-31
Identities = 228/314 (73%), Gaps = 10/314 (3%)
Strand=Plus/Minus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
||||| || || ||| |||||| ||||||||||| |||| | |||||||| |||||||
Sbjct 461 TACTCCCCGACCCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTCCATC 402
Query 793968 CACGGGAACGGGT--TGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCG-ACGCAAGCAGG 794024
|| ||||||| || | || || |||| || |||| |||| ||||| |||
Sbjct 401 CAATCAAACGGGTTCTGAACACCA--TATACCTTCCCGTACCCTAGCGCTCGCAA-CAGC 345
Query 794025 CGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC- 794083
|| ||||| ||||| || |||||||||| ||| | || ||||||| |||| | |||
Sbjct 344 CGATCGGCAACGAACTCGATGTACTGGCTCATCAACGCACCGTTCATCCCGACCAACGCG 285
Query 794084 CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTG 794143
||| ||||||| |||| ||||||||| |||||||||| || || ||| | |||| |
Sbjct 284 CAC-GGCAGCGCGTCGCAGACAAACTCCCTCTCGATCTCCACCGCGTCGCGAACGATC-G 227
Query 794144 CCTGGGCACG-TCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGT 794202
||| | | || || | |||| | || | | ||| |||||||| |||||||
Sbjct 226 CCTTGACTCGCTCCTCGCTCAGCTTCTTTCTCAGGAGGGAGTAAAGCAGGCAAGCAAAGT 167
Query 794203 CGCAATGCAGACCT 794216
|||| |||||||||
Sbjct 166 CGCAGTGCAGACCT 153
Score = 111 bits (122), Expect = 2e-18
Identities = 109/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||||||||| || ||||| |||||| ||| ||| || ||||||||||| || ||
Sbjct 156 ACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATGAGGCCTCGTTT 97
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||||||||| || ||||| ||||| || || ||||| ||||| || |||||| ||| ||
Sbjct 96 CTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACGCAGGCGAA 37
Query 794460 GCCGACGAGCCGCTCGGCAAA 794480
| ||| || |||||||| ||
Sbjct 36 GGCGATCAGACGCTCGGCGAA 16
>seq167436
Length=640
Score = 147 bits (162), Expect = 3e-29
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||| | ||||| |||||||||||||| | ||||| |||||||| |||||||||
Sbjct 160 GCCTCCGCGACTTGAACCTCCTTCATGAACCTCCCGGCGAGGTTCTCGAGGACGATGCCG 219
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
||| ||||||||||||||||||||| || |||| ||||| ||||||| | | ||
Sbjct 220 TCGGAGGCGGCGAAAAAGGCGAGGACATGGGTGATGAAGTGCTTCTCGTCGGGGGTTAGG 279
Query 796270 GAGACCCAGTGGACCG-TGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328
| | | | ||| | |||| || ||||| |||||||||||||| || |||||
Sbjct 280 GCTTCGAACT-GACGGATGTCCTGAGAAAGATCGACTTCCTCGGCGGTCCAGAAAGAGGC 338
Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378
|||||| || |||||||| ||||| || | | || |||| |||||||
Sbjct 339 CTCGGCTTTCTTGTACATTTCCCAGATTTCTGGATACTGGATTGGGAACA 388
Score = 109 bits (120), Expect = 9e-18
Identities = 114/150 (76%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCC 794574
||||||| ||||| ||| || | || || |||||||||||| |||||||| || |
Sbjct 4 GCCCACTGGGCCTTCTTCGCGACGCAAGGGACGGTGTCGATGGCGTGAAAGAGGCGGGTC 63
Query 794575 TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATG 794634
|||||| | | |||||||| ||| | || | ||||| ||| |||| |||||||||
Sbjct 64 TTCTCGGCGGAGTCCTTGATGTACGACTCCAGAAGGAGGCTGTACATCTCGGAGTGGATG 123
Query 794635 TTTTCGATGGCGATCTGGAAGCCATAAAAG 794664
|| || ||| ||||||||||||| || |||
Sbjct 124 TTCTCAATGCCGATCTGGAAGCCGTAGAAG 153
>seq265020
Length=820
Score = 134 bits (148), Expect = 2e-25
Identities = 223/313 (71%), Gaps = 8/313 (3%)
Strand=Plus/Minus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
||||| || || | | |||||| ||||||||||| |||| | |||||||| |||||||
Sbjct 461 TACTCCCCGACCCTCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTCCATC 402
Query 793968 CACGGGAACGGGTTGGCCGT-CAG-GTAGTGCTTCTCGCACCCGAGCG-ACGCAAGCAGG 794024
|| |||||||| | | || ||| |||| || |||| |||| || ||| |||
Sbjct 401 CAATCAAACGGGTT--CTGAACACCGTACACCTTCCCGTACCCTAGCGCACCCAA-CAGC 345
Query 794025 CGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCC 794084
|||||||||||||| || ||||| || | ||| | |||| ||||||| |||| | |||
Sbjct 344 CGGTCGGCGACGAACTCGATGTATTGACTCATCAAGGCGCCGTTCATCCCGACCAACGCA 285
Query 794085 ACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGC 794144
|| |||| |||| |||||||| |||||||||| || || ||| || ||| ||
Sbjct 284 CATGGTAGCGCGTCGCACACAAACTCCCTCTCGATCTCCACCGCGTCGCGGACGAT-AGC 226
Query 794145 CTGGGCACG-TCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTC 794203
|| | | || || | |||| | || | || ||| || |||||||| || ||
Sbjct 225 CTTGACTCGCTCCTCGCTCAGCTTCTTCCTCAGAAGCGAGTAAAGAAGGCAGGCGAAATC 166
Query 794204 GCAATGCAGACCT 794216
||| ||||| |||
Sbjct 165 GCAGTGCAGGCCT 153
Score = 109 bits (120), Expect = 9e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|||||||| || ||||| |||||| ||| ||| || ||||||||||| || |||
Sbjct 155 CCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATGAGGCCTCGTTTC 96
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|||||||| || ||||| ||||| || || ||||| ||||| || |||||| ||| |||
Sbjct 95 TTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACGCAGGCGAAG 36
Query 794461 CCGACGAGCCGCTCGGCAAA 794480
||| || |||||||| ||
Sbjct 35 GCGATCAGACGCTCGGCGAA 16
>seq171845
Length=3258
Score = 125 bits (138), Expect = 1e-22
Identities = 171/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||| || |||||||| ||||| |||||||||||| | || || || ||| | |
Sbjct 2437 TGAACTTGGTCACCGCCTTGGTTCCCTCGGAGACGGCGTGCTTCGCGAGCTCACCGGGAA 2496
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || | |||||| ||||||||||| |||| ||||||| |||||| |
Sbjct 2497 GAACAAGCCTCACGGCAGTCTGGATCTCCCGGGATGTGATCGTGGGCTTCTTGTTGTACC 2556
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|| || | |||||| | ||| |||| |||||||||| || |||||
Sbjct 2557 TGGCGAGCCTTGAGGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAAACTGTTCA 2616
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
||||| ||| | ||| ||||||| || | ||||||||| ||||||||||| ||||||
Sbjct 2617 TGATCCCCATGGCCTTGCTGGAGATCCCGATGTCGGGGTGAACCTGCTTGAGGACCTTG 2675
>seq97558
Length=2857
Score = 120 bits (132), Expect = 5e-21
Identities = 170/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|| ||||||| || |||||||||||||| ||||| |||||| |||| || |||||| | |
Sbjct 2290 TGAACTTGGTCACCGCCTTGGTACCCTCGGAGACAGCGTGCTTGGCGAGCTCGCCGGGAA 2231
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || | ||| || ||||||||||| |||| | ||| || |||||| |
Sbjct 2230 GAACAAGTCTCACCGCAGTCTGGATCTCCCGGGAGGTGATGGTCGGCTTCTTGTTGTACC 2171
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
||||| | |||||| | ||| |||| |||||||||| || |||||
Sbjct 2170 TGGCCAGCCTCGAGGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAAACTGTTCA 2111
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||| ||| | ||| ||||||| || | ||| ||||| ||||||||||| ||||||
Sbjct 2110 TGATTCCCATGGCCTTGCTGGAGATCCCGATGTCCGGGTGGACCTGCTTGAGGACCTTG 2052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7874119414479975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |