Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq97145 161 2e-33 seq237122 152 8e-31 seq167436 147 3e-29 seq265020 134 2e-25 seq171845 125 1e-22 seq97558 120 5e-21 >seq97145 Length=990 Score = 161 bits (178), Expect = 2e-33 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | ||||| |||||||||||||| | ||||| |||||||| ||||| ||| Sbjct 124 GCCTCCGCGACTTGAACCTCCTTCATGAACCTCCCGGCGAGGTTCTCGAGTACGATTCCG 183 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||||||||| |||||||||||||| |||| ||||| |||||||| | | || Sbjct 184 TCGGAGGCGGCGAAGAAGGCGAGGACGTGGCTGATGAAGTGCTTCTCGTCGTGGGTCAGG 243 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 | | | ||| | || | |||||| || |||||||||||||| ||||||||| Sbjct 244 GCTTCAAACTGGCGAATATCCTGGGAGAGGTCCACTTCCTCGGCGGTCCAGAAGGAGGCC 303 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 ||||| || |||||||| ||||| || | |||| |||| ||||||| Sbjct 304 TCGGCTTTCTTGTACATTTCCCAGATTTCTGGGTACTGGATTGGGAACA 352 Score = 98.7 bits (108), Expect = 2e-14 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 794548 GTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATG 794607 |||||||||||| | |||||| || ||||||| | | |||||||| || | || | Sbjct 1 GTGTCGATGGCGTGGAAGAGGCGGGTCTTCTCGGCGGAGTCCTTGATATACGACTCCAGA 60 Query 794608 AGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAG 794664 ||||| ||| |||| ||||||||||| |||||||||||||||||||| || ||| Sbjct 61 AGGAGGCTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAG 117 >seq237122 Length=485 Score = 152 bits (168), Expect = 8e-31 Identities = 228/314 (73%), Gaps = 10/314 (3%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 ||||| || || ||| |||||| ||||||||||| |||| | |||||||| ||||||| Sbjct 461 TACTCCCCGACCCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTCCATC 402 Query 793968 CACGGGAACGGGT--TGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCG-ACGCAAGCAGG 794024 || ||||||| || | || || |||| || |||| |||| ||||| ||| Sbjct 401 CAATCAAACGGGTTCTGAACACCA--TATACCTTCCCGTACCCTAGCGCTCGCAA-CAGC 345 Query 794025 CGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGC- 794083 || ||||| ||||| || |||||||||| ||| | || ||||||| |||| | ||| Sbjct 344 CGATCGGCAACGAACTCGATGTACTGGCTCATCAACGCACCGTTCATCCCGACCAACGCG 285 Query 794084 CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTG 794143 ||| ||||||| |||| ||||||||| |||||||||| || || ||| | |||| | Sbjct 284 CAC-GGCAGCGCGTCGCAGACAAACTCCCTCTCGATCTCCACCGCGTCGCGAACGATC-G 227 Query 794144 CCTGGGCACG-TCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGT 794202 ||| | | || || | |||| | || | | ||| |||||||| ||||||| Sbjct 226 CCTTGACTCGCTCCTCGCTCAGCTTCTTTCTCAGGAGGGAGTAAAGCAGGCAAGCAAAGT 167 Query 794203 CGCAATGCAGACCT 794216 |||| ||||||||| Sbjct 166 CGCAGTGCAGACCT 153 Score = 111 bits (122), Expect = 2e-18 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||||||||| || ||||| |||||| ||| ||| || ||||||||||| || || Sbjct 156 ACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATGAGGCCTCGTTT 97 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| || ||||| ||||| || || ||||| ||||| || |||||| ||| || Sbjct 96 CTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACGCAGGCGAA 37 Query 794460 GCCGACGAGCCGCTCGGCAAA 794480 | ||| || |||||||| || Sbjct 36 GGCGATCAGACGCTCGGCGAA 16 >seq167436 Length=640 Score = 147 bits (162), Expect = 3e-29 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | ||||| |||||||||||||| | ||||| |||||||| ||||||||| Sbjct 160 GCCTCCGCGACTTGAACCTCCTTCATGAACCTCCCGGCGAGGTTCTCGAGGACGATGCCG 219 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||| ||||||||||||||||||||| || |||| ||||| ||||||| | | || Sbjct 220 TCGGAGGCGGCGAAAAAGGCGAGGACATGGGTGATGAAGTGCTTCTCGTCGGGGGTTAGG 279 Query 796270 GAGACCCAGTGGACCG-TGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 | | | | ||| | |||| || ||||| |||||||||||||| || ||||| Sbjct 280 GCTTCGAACT-GACGGATGTCCTGAGAAAGATCGACTTCCTCGGCGGTCCAGAAAGAGGC 338 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 |||||| || |||||||| ||||| || | | || |||| ||||||| Sbjct 339 CTCGGCTTTCTTGTACATTTCCCAGATTTCTGGATACTGGATTGGGAACA 388 Score = 109 bits (120), Expect = 9e-18 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCC 794574 ||||||| ||||| ||| || | || || |||||||||||| |||||||| || | Sbjct 4 GCCCACTGGGCCTTCTTCGCGACGCAAGGGACGGTGTCGATGGCGTGAAAGAGGCGGGTC 63 Query 794575 TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATG 794634 |||||| | | |||||||| ||| | || | ||||| ||| |||| ||||||||| Sbjct 64 TTCTCGGCGGAGTCCTTGATGTACGACTCCAGAAGGAGGCTGTACATCTCGGAGTGGATG 123 Query 794635 TTTTCGATGGCGATCTGGAAGCCATAAAAG 794664 || || ||| ||||||||||||| || ||| Sbjct 124 TTCTCAATGCCGATCTGGAAGCCGTAGAAG 153 >seq265020 Length=820 Score = 134 bits (148), Expect = 2e-25 Identities = 223/313 (71%), Gaps = 8/313 (3%) Strand=Plus/Minus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 ||||| || || | | |||||| ||||||||||| |||| | |||||||| ||||||| Sbjct 461 TACTCCCCGACCCTCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTCCATC 402 Query 793968 CACGGGAACGGGTTGGCCGT-CAG-GTAGTGCTTCTCGCACCCGAGCG-ACGCAAGCAGG 794024 || |||||||| | | || ||| |||| || |||| |||| || ||| ||| Sbjct 401 CAATCAAACGGGTT--CTGAACACCGTACACCTTCCCGTACCCTAGCGCACCCAA-CAGC 345 Query 794025 CGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCC 794084 |||||||||||||| || ||||| || | ||| | |||| ||||||| |||| | ||| Sbjct 344 CGGTCGGCGACGAACTCGATGTATTGACTCATCAAGGCGCCGTTCATCCCGACCAACGCA 285 Query 794085 ACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGC 794144 || |||| |||| |||||||| |||||||||| || || ||| || ||| || Sbjct 284 CATGGTAGCGCGTCGCACACAAACTCCCTCTCGATCTCCACCGCGTCGCGGACGAT-AGC 226 Query 794145 CTGGGCACG-TCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTC 794203 || | | || || | |||| | || | || ||| || |||||||| || || Sbjct 225 CTTGACTCGCTCCTCGCTCAGCTTCTTCCTCAGAAGCGAGTAAAGAAGGCAGGCGAAATC 166 Query 794204 GCAATGCAGACCT 794216 ||| ||||| ||| Sbjct 165 GCAGTGCAGGCCT 153 Score = 109 bits (120), Expect = 9e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||| || ||||| |||||| ||| ||| || ||||||||||| || ||| Sbjct 155 CCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATGAGGCCTCGTTTC 96 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| || ||||| ||||| || || ||||| ||||| || |||||| ||| ||| Sbjct 95 TTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACGCAGGCGAAG 36 Query 794461 CCGACGAGCCGCTCGGCAAA 794480 ||| || |||||||| || Sbjct 35 GCGATCAGACGCTCGGCGAA 16 >seq171845 Length=3258 Score = 125 bits (138), Expect = 1e-22 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| || |||||||| ||||| |||||||||||| | || || || ||| | | Sbjct 2437 TGAACTTGGTCACCGCCTTGGTTCCCTCGGAGACGGCGTGCTTCGCGAGCTCACCGGGAA 2496 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | |||||| ||||||||||| |||| ||||||| |||||| | Sbjct 2497 GAACAAGCCTCACGGCAGTCTGGATCTCCCGGGATGTGATCGTGGGCTTCTTGTTGTACC 2556 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 || || | |||||| | ||| |||| |||||||||| || ||||| Sbjct 2557 TGGCGAGCCTTGAGGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAAACTGTTCA 2616 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||| | ||| ||||||| || | ||||||||| ||||||||||| |||||| Sbjct 2617 TGATCCCCATGGCCTTGCTGGAGATCCCGATGTCGGGGTGAACCTGCTTGAGGACCTTG 2675 >seq97558 Length=2857 Score = 120 bits (132), Expect = 5e-21 Identities = 170/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| || |||||||||||||| ||||| |||||| |||| || |||||| | | Sbjct 2290 TGAACTTGGTCACCGCCTTGGTACCCTCGGAGACAGCGTGCTTGGCGAGCTCGCCGGGAA 2231 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| || ||||||||||| |||| | ||| || |||||| | Sbjct 2230 GAACAAGTCTCACCGCAGTCTGGATCTCCCGGGAGGTGATGGTCGGCTTCTTGTTGTACC 2171 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||| | |||||| | ||| |||| |||||||||| || ||||| Sbjct 2170 TGGCCAGCCTCGAGGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAAACTGTTCA 2111 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||| | ||| ||||||| || | ||| ||||| ||||||||||| |||||| Sbjct 2110 TGATTCCCATGGCCTTGCTGGAGATCCCGATGTCCGGGTGGACCTGCTTGAGGACCTTG 2052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7874119414479975