Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq86164 89.7 4e-13 seq154533 87.8 1e-12 seq380537 84.2 2e-11 >seq86164 Length=2128 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| |||||| | || || || ||||| ||| |||| ||| ||| Sbjct 332 ATGCAGATCTTTGTGAAAACTCTTACCGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 273 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || ||| | | || ||| ||||| || || || || | ||| || || Sbjct 272 -GACACCATCGACAATGTCAAAGCTAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCA 214 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | || || || ||||| ||||||| | ||| | || || ||||| Sbjct 213 GCAGAGGCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTTGCTGATTACAA 154 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||||||||||||||||| | || ||||| Sbjct 153 CATTCAAAAGGAGTCTACGCTCCATTTGGTG 123 >seq154533 Length=826 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| |||||||| || || | || ||||| || || ||| | || ||| ||| Sbjct 187 ATGCAGATTTTTGTGAAGACCCTGACTGGCAAGACGATCACCTTGGAGGTCGAGAGCTCA 246 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | | || || ||||||| || || || ||| | || || || Sbjct 247 -GACACCATTGACAATGTGAAGTCAAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCA 305 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||||||||||| ||| ||||| ||||| ||||| | | || ||||||| ||||| Sbjct 306 GCAGAGACTTATTTTTGCTGGTAAGCAGCTCGAGGATGGGAGGACTCTGGCGGATTACAA 365 Query 107735 CATTCAAAAGGAGTCTACGTTGCAC 107759 || || ||||||||||| ||||| Sbjct 366 TATCCAGAAGGAGTCTACCCTGCAC 390 >seq380537 Length=500 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708 ||||||||||| | || |||||||||||| | |||| ||| || || || |||| Sbjct 356 GATAAAGAAGGAATCCCTCCTGATCAGCAGAGATTGATTTTTGCTGGGAAGCAATTGGAA 297 Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 || | | || | ||||| |||||||| ||||||||||| ||| | || |||| ||| Sbjct 296 GATGGGAGGACTCTTGCGGATTACAACATCCAAAAGGAGTCGACGCTTCATCTGGTTTTG 237 Query 107769 AGATTGCGAGGGGGAA 107784 || || | ||||||| Sbjct 236 AGGCTGAGGGGGGGAA 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396951599311225