Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq148231 118 7e-22 seq5063 104 2e-17 seq4315 98.7 6e-16 seq355996 95.1 8e-15 seq314259 95.1 8e-15 seq86164 93.3 3e-14 seq230935 89.7 3e-13 seq33053 86.0 4e-12 seq1996 86.0 4e-12 seq107409 84.2 1e-11 seq208788 82.4 5e-11 >seq148231 Length=1271 Score = 118 bits (130), Expect = 7e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||||| ||| ||||||||||| || || ||||||||||||| ||| || || | Sbjct 680 ACGAAGCACCAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCGAGGGTTCGGCC 621 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | |||||| || || || |||| | |||||| || | || | |||||| || Sbjct 620 GTCTTCAAGTTGTTTCCCAGCGAAGATCAGCCTCTGCTGGTCCGGTGGAATACCTTCCTT 561 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || || ||| || | ||| | ||||||| ||||| || | ||||| Sbjct 560 GTCTTGGATCTTAGCCTTC-ACGTTGTCGATGGTGTCGGAACTCTCCACCTCGAGCGTGA 502 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || | ||||| |||||||||||||| Sbjct 501 TCGTCTTTCCCGTGAGGGTTTTCACAAAGATCTGCAT 465 Score = 95.1 bits (104), Expect = 8e-15 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||| | ||| ||||||||||| || || |||||||| || | ||| ||||| |||| || Sbjct 1130 CACAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCGTCCTC 1071 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 || || ||||||||||| |||| ||||||||| || | || | ||||| ||||| Sbjct 1070 CAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTC 1014 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| ||||||||||| || || ||||||||||||| | || || |||| ||| Sbjct 901 ACCAAATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCCAAGGTACGACCGTCCTCC 842 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 || || || ||||| || |||| | |||||| || | || | || || ||||| Sbjct 841 AACTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGG 782 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || ||| || | ||| | |||||| || || || | || || || || Sbjct 781 ATCTTGGCCTTC-ACGTTGTCTATGGTGTCCGAACTCTCGACTTCTAGGGTAATGGTCTT 723 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| ||||||||||||||| Sbjct 722 GCCGGTAAGGGTTTTCACAAAGATCTGCATA 692 >seq5063 Length=5799 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||| | ||| ||||||||||| || || ||||||||||| | ||| ||||| |||| || Sbjct 415 CACAAGATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCGAGGGTGCGACCGTCCTC 356 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || ||||| || || |||| ||||||||| || | || | ||||| ||||| Sbjct 355 TAACTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTCCTG 296 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || | | || | ||| | ||||||| || || || | ||||| || | Sbjct 295 GATCTT-GGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACCTCCAAAGTGATGGTCT 237 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| ||||| |||||||||||||| Sbjct 236 TGCCGGTTAGAGTTTTGACAAAGATCTGCAT 206 >seq4315 Length=3911 Score = 98.7 bits (108), Expect = 6e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| || || ||| || || ||||||||||||| || || || |||| || Sbjct 3731 CACCAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCCTC 3672 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | || |||||||| ||||||| |||||||| || |||| | || || ||||| Sbjct 3671 AAGCTGCTTTCCGGCGAAAATCAGCCGCTGCTGGTCCGGCGGAATCCCCTCCTTGTCCTG 3612 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||||| ||| |||| ||| | |||||| || || || |||| || || || | Sbjct 3611 GATTTTGGCCTTC-ACATTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTTATGGTCT 3553 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| ||||| || ||||||||||| Sbjct 3552 TCCCCGTTAGGGTTTTCACGAAGATCTGCAT 3522 >seq355996 Length=1690 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 ||||| || ||| || || |||||||| |||| ||| || || |||| || | || Sbjct 921 TGTAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTTCGGCCGTCCTCGAGCTGC 980 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || |||| |||||||| || | || | ||||| ||||| || ||| Sbjct 981 TTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTC 1040 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| ||| ||| | ||||||| ||||| || || | || || || ||||| || Sbjct 1041 GCCTTCA-CATTGTCGATGGTGTCGGAGGATTCGACCTCTAGGGTTATGGTCTTACCCGT 1099 Query 33726 TAACGTTTTTACAAAGATCTGCATAGTTG 33754 | ||||| || ||||||||||| |||| Sbjct 1100 AAGGGTTTTCACGAAGATCTGCATGGTTG 1128 >seq314259 Length=830 Score = 95.1 bits (104), Expect = 8e-15 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||| | ||| ||||||||||| || || |||||||| || | ||| ||||| |||| || Sbjct 363 CACAAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCGTCCTC 304 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 || || ||||||||||| |||| ||||||||| || | || | ||||| ||||| Sbjct 303 CAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCTTCCTTGTC 247 >seq86164 Length=2128 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | || | ||||||||| || || ||| ||||| ||||||||||| | Sbjct 105 ACCACCACGGAGGCGAAGCACCAAATGGAGCGTAGACTCCTTTTGAATGTTGTAATCAGC 164 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || |||| || | || || ||||| || |||| | |||||| ||| | || Sbjct 165 AAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGG 224 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||| || ||||| || || | || |||| ||| | |||||| ||| || Sbjct 225 AATACCCTCCTTGTCTTGGATCTT-AGCTTTGACATTGTCGATGGTGTCAGAGCT---TT 280 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || | ||||| || || || || | ||||| |||||||||||||| Sbjct 281 CCACCTCGAGGGTGATGGTCTTTCCGGTAAGAGTTTTCACAAAGATCTGCAT 332 >seq230935 Length=680 Score = 89.7 bits (98), Expect = 3e-13 Identities = 166/240 (69%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | | ||| | |||||| || || || ||||| || ||| Sbjct 388 AAAATCTGCATCCCACCACGGAGACGGAGCACCAAGTGAAGGGTTGATTCTTTCTGGATG 447 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||||| || || | |||| || | || ||||||||||| |||| | |||| Sbjct 448 TTGTAATCGGCAAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAGCCTCTGC 507 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | |||||| ||||| ||| || | || |||| || | |||||| Sbjct 508 TGGTCTGGGGGAATACCTTCCTTGTCCTGAATCTT-GGCTTTGACATTATCAATGGTGTC 566 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||| || || | ||||| || || || || | || || |||||||| ||||| Sbjct 567 GGAACTTTCAACCTCCAAAGTGATGGTCTTCCCAGTGAGGGTCTTAACAAAGATTTGCAT 626 >seq33053 Length=1800 Score = 86.0 bits (94), Expect = 4e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| |||| || || || |||| || | ||||||||||| || Sbjct 1531 CTCCTTCTGGATGTTGTAGTCGGCTAGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAA 1472 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| ||||||||| || | || | ||||| ||||| || || | | |||| Sbjct 1471 GATCAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTT-GGCCTTGACAT 1413 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | |||||| || || || || | || || || || || |||| ||||| | Sbjct 1412 TGTCGATTGTGTCGGAGGACTCGACCTCTAGGGTTATGGTCTTGCCCGTTAGGGTTTTCA 1353 Query 33737 CAAAGATCTGCATAGTTGGTG 33757 | ||||||||||| |||| || Sbjct 1352 CGAAGATCTGCATGGTTGCTG 1332 >seq1996 Length=3211 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/228 (69%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || || | ||| | ||||| ||| || || ||| || || ||||||||||||| Sbjct 2044 CCTCCCCTGAGACGGAGCACCAGATGGAGGGTTGACTCCTTCTGGATGTTGTAATCGGCT 1985 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| || | || |||||||| || ||||| |||||||| || |||| Sbjct 1984 AGGGTTCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAACCGCTGCTGGTC-GGCGGA 1926 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || || ||| |||| ||| | ||||| || || || Sbjct 1925 ATCCCCTCCTTGTCTTGGATCTTGGCCTTC-ACATTGTCGATTGTGTCCAAGGACTCGAC 1867 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || || || |||| ||||| || ||||||| ||| Sbjct 1866 CTCAAGAGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTACAT 1819 >seq107409 Length=3443 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||||| || || || ||||| ||||||||||| | Sbjct 2421 ACCACCACGGAGACGGAGGACCAAATGAAGGGTCGATTCCTTTTGGATGTTGTAATCAGC 2480 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | || ||||| ||||| ||||| | ||||||||| | || Sbjct 2481 GAGAGTGCGGCCATCCTCAAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGATCTGGGGG 2540 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | || || ||||| |||||| | | || | ||| | ||| || ||| || Sbjct 2541 AATCCCCTCCTTGTCCTGAATTTT-AGCCTTGACGTTGTCGATGGTATCCGAGCT---TT 2596 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| ||||| || || || || | ||||| || ||||| ||||| Sbjct 2597 CGACCTCAAGAGTGATGGTCTTTCCAGTAAGGGTTTTCACGAAGATTTGCAT 2648 >seq208788 Length=2051 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||| | ||| | || || || ||| || || ||||||||||| | Sbjct 1469 CCACCCCTCAGACGCAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGCA 1410 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | |||| || | ||| || ||||| ||||||| | |||||| ||| | || Sbjct 1409 AGGGTCCTTCCGTCCTCAAGTTGCTTCCCGGCGAAAATCAGCCTCTGCTGGTCTGGTGGA 1350 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTC 33698 | || || ||||| ||| || ||| | |||| || | ||||| ||| || Sbjct 1349 ATCCCCTCCTTGTCTTGAATCTT-TGTCTTCACATTATCAATTGTGTC---TGAACTCTC 1294 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| || | ||||| || || ||||| | || || ||||| |||||||| Sbjct 1293 CACCTCGAGGGTGATGGTCTTTCCTGTAAGGGTCTTGACAAAAATCTGCAT 1243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 327117492168000