Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq3 569 6e-158 seq332406 149 2e-31 seq137405 134 4e-27 seq181776 122 3e-23 seq333312 111 5e-20 seq371407 107 6e-19 seq295831 96.9 1e-15 >seq3 Length=31233 Score = 569 bits (630), Expect = 6e-158 Identities = 711/963 (74%), Gaps = 14/963 (1%) Strand=Plus/Minus Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 1635 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 1577 Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650 |||| || ||||| || |||||||| || || || || || |||||||| || || || Sbjct 1576 TTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 1517 Query 19651 ACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG 19710 ||| || || || || |||||||||||||| || || || || ||| | |||| | Sbjct 1516 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1457 Query 19711 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAA 19768 | || || || || | ||||| |||||||| |||||||| ||| |||||||| Sbjct 1456 TTCTGCG--GCTATAGGTTTGCACTTTTACCCAATCTGGGAAGCGGCTTCTGTTGATGAA 1399 Query 19769 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTAT 19828 ||| | ||||| || || || | | | | || | |||||| | |||| | | Sbjct 1398 TGGTTATACAATGGTGGTCCTTATGAGTTAATTGTTCTACACTTCTTACTTGGTGTAGCT 1339 Query 19829 GCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGT 19888 ||| ||||| || |||||||||||||| | || || || ||| | ||||||||| | Sbjct 1338 TGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 1279 Query 19889 GTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGG 19947 ||||| || || ||||| |||||||| || |||| || ||||| | |||| || |||| Sbjct 1278 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATCTATCCAATTGG 1220 Query 19948 TCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTT 20007 ||| || ||||| || || | ||||||| | || ||||| ||||| ||||||| |||| | Sbjct 1219 TCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGAT 1160 Query 20008 GGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGG 20067 ||||||||||| || || ||||| || |||||||| || |||||| | ||||| ||||| Sbjct 1159 TGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGG 1100 Query 20068 TGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGT 20127 ||||||||| || || ||||||||||| ||||| ||||| |||| || | || | ||| Sbjct 1099 TGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGA 1041 Query 20128 GC-GTGAGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAAGTTTGGGCAAGAAGA 20184 | | || || || ||| | ||| || | || | ||||||| || || ||||| || Sbjct 1040 TCAGGGAAACCACAGAAAATGAA--TCCGCTAATGAAGGTTACAGATTCGGTCAAGAGGA 983 Query 20185 AGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGC 20244 ||| |||||||| || ||||||||||||||||| ||||| || |||||||||||||| || Sbjct 982 AGAAACCTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 923 Query 20245 TTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGAT 20304 |||||||||| |||||| ||||||||||||| ||||| ||||| || ||||| || Sbjct 922 AAGTTTCAACAATTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTAT 863 Query 20305 TTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAA 20364 |||||| | || || || || || ||||| || || | || ||||| || || || Sbjct 862 TTGGTTTACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAA 803 Query 20365 CCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCG 20424 || || | | || | | |||||||| ||| ||||||||||||| || | || || Sbjct 802 TCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATCATTAACCG 743 Query 20425 TGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCT 20484 ||||||||| || | || || ||||| || || ||||||||||||||||| || ||||| Sbjct 742 TGCTAATCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCATAACTTCCCTCTAGACCT 683 Query 20485 TGC 20487 || Sbjct 682 AGC 680 >seq332406 Length=435 Score = 149 bits (164), Expect = 2e-31 Identities = 196/272 (72%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 20213 GGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACAC 20272 ||||| ||||| || |||||||||||||| || |||||||||| | |||| ||||| Sbjct 1 GGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCATTCTTTACAC 60 Query 20273 TTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACA 20332 |||||||| ||||| ||||| | ||||| |||| ||| | || || || || | Sbjct 61 TTCTTCCTAGCTGCTTGGCCTATAGTAGGTATTTTGTTTACCGCTTTAGGTATTAGCGCT 120 Query 20333 ATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGT 20392 ||||| || || | | ||||| || || || || | | | || | | | |||| Sbjct 121 ATGGCTTTCAACTTAGATGGTTTTAATTTCAATCAATTTGTAGTTGATAGTCAAGCTCGT 180 Query 20393 GTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCAT 20452 || ||| ||||||||||||| || | || ||||||||||| || | | || ||||| Sbjct 181 GTAATTAATACTTGGGCTGATATCATTAACCGTGCTAATCTTGGTATGAAAGTTATGCAC 240 Query 20453 GAACGGAATGCTCATAACTTCCCACTTGACCT 20484 || || ||||||||| ||||||| | ||||| Sbjct 241 GAGCGTAATGCTCATGACTTCCCTGTAGACCT 272 >seq137405 Length=2057 Score = 134 bits (148), Expect = 4e-27 Identities = 359/540 (66%), Gaps = 24/540 (4%) Strand=Plus/Plus Query 19970 ATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAAC 20029 |||||||| || |||| |||| || |||| ||| | |||| |||| || ||| Sbjct 621 ATGCCTTTAGGAATCTGCTGTACTTTGAACTTTATGATTATATTATAAGCTATGCACAAC 680 Query 20030 ATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTC 20089 || || ||||||| || | |||| | ||||| ||| |||||||| || || |||||| Sbjct 681 ATCCTTATGCACCTATTTCGCATGTTAGGTGTAGCTAGTGTATTCAACGGCTCCCTATTC 740 Query 20090 AGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGAGA-CTACTGAACAGGA 20148 ||||| || || |||| || | || || | ||| | | | | || || | | Sbjct 741 AGTGCTATACATGGTTT-CTCGATAATCTCTAGTTTGATCAAGGCAACCACAAAAAATAA 799 Query 20149 AAGTCAG--AACTATGGTTACAAGTTTGGGCAAGAAGAAGAGA-CCTATAACATCGTAGC 20205 | || | || | ||| | | || | ||| | ||| | | ||||||| | ||||| Sbjct 800 A--TCCGTTAATAAAGGTCATATATTCGATCAAAAGGAAAAAAACCTATAATGTTGTAGC 857 Query 20206 CGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTC 20265 |||| ||||||| ||||| || |||||||||||| | |||||||||| ||||| Sbjct 858 CGCTTATGGTTATTTTGGCCGATTGATCTTCCAACATAAAAATTTCAACAATTCTCGTTC 917 Query 20266 TCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGT 20325 | |||||||||| | | ||| |||| || |||| | | |||| | ||||| | | Sbjct 918 TTTACACTTCTTTCCAGTTGCTTGGCTTGTAATAGGTACTGGGTTTACCGCCTTAGATAT 977 Query 20326 TTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCA----GTCCCTTCTCGACA 20381 | || | ||| ||||| | || | ||| || || || | || || | | || Sbjct 978 TAGCACTACGGCTTTTAACTTAAAGGATTTTAATTTCAATTACTTTGTAGCTGATGGTCA 1037 Query 20382 ACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTG 20441 | ||| |||| ||| ||||||||||||| || | || | ||| ||||| | | Sbjct 1038 A----GGTTGTGTAATTAATACTTGGGCTGATATCATTAACCATGCCAATCTTCGTATGA 1093 Query 20442 AGGTGATGCATGA---ACGG----AATG--CTCATAACTTCCCACTTGACCTTGCCAGCG 20492 | || |||||||| |||| |||| |||||||||||| | ||| | ||| ||| Sbjct 1094 AAGTTATGCATGAGCGACGGGAGTAATGGTATCATAACTTCCCCTTAGACTTAGCCGGCG 1153 >seq181776 Length=4072 Score = 122 bits (134), Expect = 3e-23 Identities = 140/186 (75%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 20033 CTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGT 20092 || |||||||| || |||||| | ||||| |||||||||||||| | || ||||||||| Sbjct 4070 CTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCAGCTCCCTATTCAGT 4011 Query 20093 GCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAGACTACTGAACAGGAAAG 20151 || ||||| ||||| |||| || | || | ||| | | || || || ||| | ||| Sbjct 4010 GCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATC 3952 Query 20152 TCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCA 20211 | || | |||||| || || ||||| ||||| |||||||| || ||| ||||||| Sbjct 3951 TGTTAATGAAAGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAACCGCTCA 3892 Query 20212 TGGTTA 20217 |||||| Sbjct 3891 TGGTTA 3886 >seq333312 Length=291 Score = 111 bits (122), Expect = 5e-20 Identities = 202/288 (70%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 19761 TTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTG--TGGTCTTCCACTTCCTCAT 19818 ||||||||||| | ||||| || || || || | || || ||| | ||||| | | Sbjct 285 TTGATGAATGGTTATACAATGGTGGTCC-TTATGAGTTAATTGCTCTAC-ACTTCTTACT 228 Query 19819 TGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGA-ATGAGGC 19877 ||| | | ||| ||||| | |||||||||||||| | | || || ||||| Sbjct 227 TGGTGTAGCTTGTTATATGGGTCATGAGTGGGAACTTAGTTTCTGTCTGGGTCATGAGTG 168 Query 19878 ----CTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTC 19933 ||| | ||| || || || ||||| ||||||| || |||| || ||||| Sbjct 167 GGAACTTAGTTTTCGTCTGGGTATTCAGCTCCTGTTGCAGTTGCTACTGCTGT-TTTCTT 109 Query 19934 G-TCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTAC 19992 | |||| || || |||| || ||||| || || | ||||||| | || ||||| ||||| Sbjct 108 GATCTATCCAATTAGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTAC 49 Query 19993 GTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCA 20040 ||||||| |||| | ||||||||||| || || ||||| || ||||| Sbjct 48 TTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 1 >seq371407 Length=281 Score = 107 bits (118), Expect = 6e-19 Identities = 139/188 (74%), Gaps = 7/188 (4%) Strand=Plus/Minus Query 19730 CACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCG 19789 || || |||||||| |||||||| |||| ||||||||||| | ||||| || || || Sbjct 185 CATTTTTACCCAATCTGGGAAGCG-GTTCTGTTGATGAATGGTTATACAATGGTGGTCCT 127 Query 19790 T---TCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAG 19846 | | | |||| ||| | ||||| | |||| | | ||| ||||| || ||| Sbjct 126 TATGTGTTAATTGT--TCTAC-ACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAG 70 Query 19847 TGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCG 19906 ||||||||||| | ||| ||||| ||| | ||||||||| |||||| || || ||||| Sbjct 69 TGGGAACTTAGTTTTCGTCTAGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCT 10 Query 19907 GTTGCAGC 19914 |||||||| Sbjct 9 GTTGCAGC 2 >seq295831 Length=1525 Score = 96.9 bits (106), Expect = 1e-15 Identities = 180/260 (69%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591 |||| |||||| |||| ||||||| ||||||| || | || ||| || | Sbjct 1253 AACCATCTTTACATTGGATGGTTTGTTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 1311 Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650 | || || ||||| || |||||||| || || || | || |||||||| | || || Sbjct 1312 TTTTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGATAGATATTGATGGTGTTCGTGA 1371 Query 19651 ACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGA- 19709 ||| || | || ||| |||||||||||||| || || || || ||| | |||| | Sbjct 1372 ACCTGTTTTTGGATCCCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1431 Query 19710 -GCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAA 19768 ||||| || || | ||||| |||||||| |||||||| ||| |||||||| Sbjct 1432 TTTTGCAAT--TATAGGTTTGCACTTTTACCCAATCTGGGAAGCGGCTTCTGTTGATGAA 1489 Query 19769 TGGCTCTACAACGGGGGACC 19788 ||| | ||||| || || || Sbjct 1490 TGGTTATACAATGGAGGTCC 1509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148128888384450