Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_025461.1 Length=45871 Score E Sequences producing significant alignments: (Bits) Value seq3 527 2e-145 seq332406 159 1e-34 seq137405 111 5e-20 seq371407 102 2e-17 seq295831 91.5 4e-14 seq223344 84.2 6e-12 >seq3 Length=31233 Score = 527 bits (584), Expect = 2e-145 Identities = 698/961 (73%), Gaps = 8/961 (1%) Strand=Plus/Minus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 ||||||||||| |||| |||||||| ||||||| || | || ||| || | Sbjct 1635 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 1577 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 |||| || ||||| || |||||||| || || || || || |||||||| || || || Sbjct 1576 TTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 1517 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGAG 28838 |||||| ||||| ||| || ||||||||||| || || || || ||| | | || | Sbjct 1516 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1457 Query 28839 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 | || || || || | ||||| |||||||| |||||||| ||| |||||||| Sbjct 1456 TTCTGCG--GCTATAGGTTTGCACTTTTACCCAATCTGGGAAGCGGCTTCTGTTGATGAA 1399 Query 28897 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTAT 28956 ||| | ||||| || || || | | | | || | |||||| | |||| || | Sbjct 1398 TGGTTATACAATGGTGGTCCTTATGAGTTAATTGTTCTACACTTCTTACTTGGTGTAGCT 1339 Query 28957 GCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGT 29016 ||| ||||| || |||||||||||||| | || || || ||| | || |||||| | Sbjct 1338 TGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 1279 Query 29017 GTCGCATACTCAGCTCCCGTCGCAGCGGCATCTGCGGTTTTCCTCGTCTACCCATTCGGT 29076 || ||||| |||||||| || ||||| || |||| |||||| | |||| ||| | ||| Sbjct 1278 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGT 1219 Query 29077 CAAGGTTCTTTTAGCGACGCGATGCCTTTGGGTATTTCAGGCACCTTCAACTACATGCTG 29136 ||||| ||| |||| |||||| | || || || || || ||||||| |||| | Sbjct 1218 CAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATT 1159 Query 29137 GTGTTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTGGGCGTTGCTGGA 29196 || |||||||| || || ||||| || |||||||| || |||||| | || || ||||| Sbjct 1158 GTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGT 1099 Query 29197 GTGTTCGGTGGCTCGCTATTTAGTGCAATGCACGGTTCGCTTGTCACGTCCTCGCTTGTG 29256 || ||||| ||||| ||||| ||||| ||||| ||||| | || || || | | ||| Sbjct 1098 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGAT 1040 Query 29257 C-GTGAGACGACTGAAGACATCTCTCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGA 29315 | | || || || ||| | || || | ||||||| || || ||||| ||||| Sbjct 1039 CAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGA 980 Query 29316 GACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTC 29375 || ||||| || ||||||||||| ||||| ||||| || ||||||||||||||||| Sbjct 979 AACCTATAATATTGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAG 920 Query 29376 TTTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTG 29435 |||||| ||| |||||| ||||||||||||| ||||| ||||| || ||||| ||||| Sbjct 919 TTTCAACAATTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTG 860 Query 29436 GTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA 29495 ||| | || || || || || ||||| || || | || |||||||| || || || Sbjct 859 GTTTACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCA 800 Query 29496 GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCGCGC 29555 || | | || | | |||||||| |||||||||||||||||| | | || || || Sbjct 799 ATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACTTGGGCTGATATCATTAACCGTGC 740 Query 29556 TAACCTCGGCTTTGAAGTAATGCATGAGCGTAATGCTCATAACTTCCCACTTGATCTGGC 29615 ||| || || | ||||| ||||| ||||||||||||||||||||||| || || || || Sbjct 739 TAATCTTGGTATGGAAGTTATGCACGAGCGTAATGCTCATAACTTCCCTCTAGACCTAGC 680 Query 29616 T 29616 | Sbjct 679 T 679 >seq332406 Length=435 Score = 159 bits (176), Expect = 1e-34 Identities = 193/263 (73%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 29341 GGTTACTTTGGACGTTTGATCTTCCAATATGCTTCTTTCAATAATAGCCGTTCTCTACAC 29400 ||||| ||||| || ||||||||||||||||| |||||| ||| | |||| ||||| Sbjct 1 GGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCATTCTTTACAC 60 Query 29401 TTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACA 29460 |||||||| ||||| ||||| | ||||| |||| ||| | || || || || | Sbjct 61 TTCTTCCTAGCTGCTTGGCCTATAGTAGGTATTTTGTTTACCGCTTTAGGTATTAGCGCT 120 Query 29461 ATGGCGTTTAATCTGAACGGTTTTAACTTTAACCAGTCGCTTCTCGACAACAATGGTCGT 29520 ||||| || || | | |||||||| || || || | | | || | | | |||| Sbjct 121 ATGGCTTTCAACTTAGATGGTTTTAATTTCAATCAATTTGTAGTTGATAGTCAAGCTCGT 180 Query 29521 GTCATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCAT 29580 || |||||||||||||||||| | | || || ||||| || || | |||| ||||| Sbjct 181 GTAATTAATACTTGGGCTGATATCATTAACCGTGCTAATCTTGGTATGAAAGTTATGCAC 240 Query 29581 GAGCGTAATGCTCATAACTTCCC 29603 ||||||||||||||| ||||||| Sbjct 241 GAGCGTAATGCTCATGACTTCCC 263 >seq137405 Length=2057 Score = 111 bits (122), Expect = 5e-20 Identities = 205/300 (68%), Gaps = 17/300 (6%) Strand=Plus/Plus Query 29317 ACTTATAACATCGTAGCCGCTCACGGTTACTTTGGACGTTTGATCTTCCAATATGCTTCT 29376 || ||||| | ||||||||| | ||||| ||||| || |||||||||||| || | Sbjct 841 ACCTATAATGTTGTAGCCGCTTATGGTTATTTTGGCCGATTGATCTTCCAACATAAAAAT 900 Query 29377 TTCAATAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGG 29436 ||||| ||| |||||| |||||||||| | | ||| |||| || |||| | | || Sbjct 901 TTCAACAATTCTCGTTCTTTACACTTCTTTCCAGTTGCTTGGCTTGTAATAGGTACTGGG 960 Query 29437 TTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTTAACTTTAACCA- 29495 || | ||||| | || || | ||| ||||| | || | |||||| || || | Sbjct 961 TTTACCGCCTTAGATATTAGCACTACGGCTTTTAACTTAAAGGATTTTAATTTCAATTAC 1020 Query 29496 ---GTCGCTTCTCGACAACAATGGTCGTGTCATTAATACTTGGGCTGATGTTCTCAATCG 29552 || ||| | | ||| ||| |||| |||||||||||||||||| | | || | Sbjct 1021 TTTGTAGCTGATGGTCAA----GGTTGTGTAATTAATACTTGGGCTGATATCATTAACCA 1076 Query 29553 CGCTAACCTCGGCTTTGAAGTAATGCATGAGC-------GTAATG--CTCATAACTTCCC 29603 || || || | | |||| |||||||||| |||||| |||||||||||| Sbjct 1077 TGCCAATCTTCGTATGAAAGTTATGCATGAGCGACGGGAGTAATGGTATCATAACTTCCC 1136 >seq371407 Length=281 Score = 102 bits (112), Expect = 2e-17 Identities = 138/188 (73%), Gaps = 7/188 (4%) Strand=Plus/Minus Query 28858 CACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCG 28917 || || |||||||| |||||||| ||| ||||||||||| | ||||| || || || Sbjct 185 CATTTTTACCCAATCTGGGAAGCGG-TTCTGTTGATGAATGGTTATACAATGGTGGTCCT 127 Query 28918 T---TCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAG 28974 | | | |||| ||| | ||||| | |||| || | ||| ||||| || ||| Sbjct 126 TATGTGTTAATTGT--TCTAC-ACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAG 70 Query 28975 TGGGAACTTAGCTATCGACTAGGAATGAGGCCGTGGATTTGTGTCGCATACTCAGCTCCC 29034 ||||||||||| | ||| ||||| ||| | || |||||| ||| ||||| |||||||| Sbjct 69 TGGGAACTTAGTTTTCGTCTAGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCT 10 Query 29035 GTCGCAGC 29042 || ||||| Sbjct 9 GTTGCAGC 2 >seq295831 Length=1525 Score = 91.5 bits (100), Expect = 4e-14 Identities = 179/260 (69%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 28660 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 28719 |||| |||||| |||| ||||||| ||||||| || | || ||| || | Sbjct 1253 AACCATCTTTACATTGGATGGTTTGTTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 1311 Query 28720 ATCTGC-TTCATTATTGCATTCATTGCGGCACCACCAGTTGACATTGATGGCATCCGCGA 28778 | || || ||||| || |||||||| || || || | || |||||||| | || || Sbjct 1312 TTTTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGATAGATATTGATGGTGTTCGTGA 1371 Query 28779 ACCTGTCGCTGGAAGTCTTCTCTATGGAAACAACATCATATCGGGAGCCGTCGTACCGA- 28837 |||||| |||| || || ||||||||||| || || || || ||| | | || | Sbjct 1372 ACCTGTTTTTGGATCCCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1431 Query 28838 -GCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAA 28896 ||||| || || | ||||| |||||||| |||||||| ||| |||||||| Sbjct 1432 TTTTGCAAT--TATAGGTTTGCACTTTTACCCAATCTGGGAAGCGGCTTCTGTTGATGAA 1489 Query 28897 TGGCTCTACAACGGGGGACC 28916 ||| | ||||| || || || Sbjct 1490 TGGTTATACAATGGAGGTCC 1509 >seq223344 Length=745 Score = 84.2 bits (92), Expect = 6e-12 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 29524 ATTAATACTTGGGCTGATGTTCTCAATCGCGCTAACCTCGGCTTTGAAGTAATGCATGAG 29583 |||||||||| ||| || || | || || ||||| || || | ||||| ||||||||| Sbjct 703 ATTAATACTTAAGCTAATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGCATGAG 644 Query 29584 CGTAATGCTCATAACTTCCCACTTGATCTGGCTA 29617 ||||||||||||||||| || || || || |||| Sbjct 643 CGTAATGCTCATAACTTTCCTCTAGACCTAGCTA 610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145975861474650