Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq3 630 2e-176 seq332406 159 1e-34 seq295831 131 5e-26 seq333312 125 2e-24 seq371407 120 9e-23 seq137405 114 4e-21 seq1619 100 8e-17 seq303336 95.1 3e-15 >seq3 Length=31233 Score = 630 bits (698), Expect = 2e-176 Identities = 735/982 (75%), Gaps = 10/982 (1%) Strand=Plus/Minus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 || ||| ||||| ||||||| || || ||||||||||| || || |||||||| || Sbjct 1662 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1603 Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841 ||||| || | || ||| | || ||| | ||| || ||||| || ||||||||||| | Sbjct 1602 ATGATCCC-TACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 1545 Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901 |||| ||||| |||||||| || || || |||||| | || ||| ||||||||||||| Sbjct 1544 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 1485 Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCC 18959 | || || || || ||| | |||| | | || || || || | ||||| ||||| Sbjct 1484 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCG--GCTATAGGTTTGCACTTTTACCC 1427 Query 18960 AATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19019 ||| |||||||| ||| ||||||||||| | ||||| || || || | | | | Sbjct 1426 AATCTGGGAAGCGGCTTCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGTTAAT 1367 Query 19020 GGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTA 19079 || | |||||| | |||| || | ||| ||||| || |||||||||||||| | Sbjct 1366 TGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTT 1307 Query 19080 TCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTC 19139 || || || ||||||||||||||| |||||| || |||||||||||||| || || | Sbjct 1306 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 1247 Query 19140 TGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGG 19199 ||| || ||| | |||||||| |||||||||| |||| |||| ||||||| | || Sbjct 1246 TGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGG 1187 Query 19200 TATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259 || |||||| ||||||| |||| |||||||||| ||||| || |||||||| ||||| Sbjct 1186 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 1127 Query 19260 CCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319 ||| || |||||| | ||||| |||||||| |||||||| || ||||| ||||| ||||| Sbjct 1126 CCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 1067 Query 19320 CGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACT 19378 ||||| |||| || | || | ||| | | ||||| || ||| | | ||| || Sbjct 1066 TGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATG 1008 Query 19379 ATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438 | || |||| || || ||||| ||||| || ||||| ||||| || |||||||| |||| Sbjct 1007 AAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATT 948 Query 19439 TTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTT 19498 |||| || | || ||||| || ||| ||||||||| |||||| |||| ||||| Sbjct 947 TTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCGTTCTTTACACTTCTTCC 888 Query 19499 TGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCAT 19558 | |||||||||||||| || || ||||||||| |||| | || | ||||| ||||| | Sbjct 887 TAGCTGCTTGGCCTGTAGTAGGTATTTGGTTTACCGCTTTAGGTATTAGCACTATGGCTT 828 Query 19559 TCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTG 19618 ||||||| ||||| ||||| || || || || | |||| | | |||||||| ||| Sbjct 827 TCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA 768 Query 19619 ATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTA 19678 ||||||||||||| || | || |||||||| || || | || || |||||||| |||| Sbjct 767 ATACTTGGGCTGATATCATTAACCGTGCTAATCTTGGTATGGAAGTTATGCACGAGCGTA 708 Query 19679 ATGCTCATAACTTCCCACTTGA 19700 |||||||||||||||| || || Sbjct 707 ATGCTCATAACTTCCCTCTAGA 686 >seq332406 Length=435 Score = 159 bits (176), Expect = 1e-34 Identities = 193/263 (73%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 19432 GGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACAT 19491 || |||||||| || | || ||||| || ||| ||||||||| | |||| |||| Sbjct 1 GGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAATTCTCATTCTTTACAC 60 Query 19492 TTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACC 19551 ||||| | |||||||||||| | || || |||| |||| |||| | || | ||| | Sbjct 61 TTCTTCCTAGCTGCTTGGCCTATAGTAGGTATTTTGTTTACCGCTTTAGGTATTAGCGCT 120 Query 19552 ATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGT 19611 ||||| |||||||| |||| ||||| || || || | | |||| | | | |||| Sbjct 121 ATGGCTTTCAACTTAGATGGTTTTAATTTCAATCAATTTGTAGTTGATAGTCAAGCTCGT 180 Query 19612 GTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCAC 19671 || ||| ||||||||||||| || | || |||||||| || || | | || |||||| Sbjct 181 GTAATTAATACTTGGGCTGATATCATTAACCGTGCTAATCTTGGTATGAAAGTTATGCAC 240 Query 19672 GAACGTAATGCTCATAACTTCCC 19694 || |||||||||||| ||||||| Sbjct 241 GAGCGTAATGCTCATGACTTCCC 263 >seq295831 Length=1525 Score = 131 bits (144), Expect = 5e-26 Identities = 202/281 (72%), Gaps = 8/281 (3%) Strand=Plus/Plus Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790 ||| | ||||||| || || |||| |||||| || || ||||||| ||||||| | Sbjct 1233 ACTAGATAACCAGCACTGAAAACCATCTTTACATTGGATGGTTTGTTGTTTTGATGATCC 1292 Query 18791 CGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGT 18848 | | || ||| | || ||| ||||| || ||||| || ||||||||||| ||||| | Sbjct 1293 C-TACCTTATTGACCGCAACT-TTTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGAT 1350 Query 18849 AGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCAT 18908 ||| |||||||| | || || |||||| || || |||||||||||||| || || Sbjct 1351 AGATATTGATGGTGTTCGTGAACCTGTTTTTGGATCCCTACTTTATGGAAACAATATTAT 1410 Query 18909 ATCGGGAGCCGTCGTTCCGA--GCAGCAATGCCATCGGACTACACTTCTACCCAATTTGG 18966 || || ||| | |||| | ||||| || || | ||||| |||||||| ||| Sbjct 1411 TTCTGGTGCCATTATTCCTACTTTTGCAAT--TATAGGTTTGCACTTTTACCCAATCTGG 1468 Query 18967 GAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACC 19007 ||||| ||| ||||||||||| | ||||| || || || Sbjct 1469 GAAGCGGCTTCTGTTGATGAATGGTTATACAATGGAGGTCC 1509 >seq333312 Length=291 Score = 125 bits (138), Expect = 2e-24 Identities = 203/287 (71%), Gaps = 9/287 (3%) Strand=Plus/Minus Query 18980 TTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTG--TGGTCTTCCACTTCCTCAT 19037 ||||||||||| | ||||| || || || || | || || ||| | ||||| | | Sbjct 285 TTGATGAATGGTTATACAATGGTGGTCC-TTATGAGTTAATTGCTCTAC-ACTTCTTACT 228 Query 19038 TGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGG----GA-TG 19092 ||| || | ||| ||||| | |||||||||||||| | | || || || || Sbjct 227 TGGTGTAGCTTGTTATATGGGTCATGAGTGGGAACTTAGTTTCTGTCTGGGTCATGAGTG 168 Query 19093 CGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTT 19152 | ||| | ||| || || |||||||||||||| | || |||| || ||| | Sbjct 167 GGAACTTAGTTTTCGTCTGGGTATTCAGCTCCTGTTGCAGTTGCTACTGCTGTTTTCTTG 108 Query 19153 GTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACG 19212 |||||||| || ||||||| |||| |||| ||||||| | || || |||||| Sbjct 107 ATCTATCCAATTAGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACT 48 Query 19213 TTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259 ||||||| |||| |||||||||| ||||| || |||||||| ||||| Sbjct 47 TTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 1 >seq371407 Length=281 Score = 120 bits (132), Expect = 9e-23 Identities = 142/188 (76%), Gaps = 7/188 (4%) Strand=Plus/Minus Query 18949 CACTTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCG 19008 || || |||||||| |||||||| ||| ||||||||||| | ||||| || || || Sbjct 185 CATTTTTACCCAATCTGGGAAGCGG-TTCTGTTGATGAATGGTTATACAATGGTGGTCCT 127 Query 19009 T---TCCAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAG 19065 | | | |||| ||| | ||||| | |||| || | ||| ||||| || ||| Sbjct 126 TATGTGTTAATTGT--TCTAC-ACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAG 70 Query 19066 TGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCT 19125 ||||||||||| | ||| ||||| ||||||||||||||| |||||| || ||||||||| Sbjct 69 TGGGAACTTAGTTTTCGTCTAGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCT 10 Query 19126 GTTGCCGC 19133 ||||| || Sbjct 9 GTTGCAGC 2 >seq137405 Length=2057 Score = 114 bits (126), Expect = 4e-21 Identities = 341/521 (65%), Gaps = 20/521 (4%) Strand=Plus/Plus Query 19189 ATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAAC 19248 |||||||| || || | |||| || |||| ||| || |||| | ||| || ||| Sbjct 621 ATGCCTTTAGGAATCTGCTGTACTTTGAACTTTATGATTATATTATAAGCTATGCACAAC 680 Query 19249 ATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTT 19308 ||||| ||||||| || | |||| | ||||| ||| |||| ||| ||| || ||||| Sbjct 681 ATCCTTATGCACCTATTTCGCATGTTAGGTGTAGCTAGTGTATTCAACGGCTCCCTATTC 740 Query 19309 AGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTGA-AACTACTGAAGAGGT 19367 ||||| || || |||| || | || || | ||| | | ||| || || | Sbjct 741 AGTGCTATACATGGTTT-CTCGATAATCTCTAGTTTGATCAAGGCAACCACAAAAAATAA 799 Query 19368 ATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGA-CTTATAACATTGTTGCTG 19426 ||| || | || | | || | ||| | ||| | | | ||||| |||| || | Sbjct 800 ATCCGTTAATAAAGGTCATATATTCGATCAAAAGGAAAAAAACCTATAATGTTGTAGCCG 859 Query 19427 CTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTC 19486 || |||| |||||||| || | || ||||| | | ||||||||| |||||| Sbjct 860 CTTATGGTTATTTTGGCCGATTGATCTTCCAACATAAAAATTTCAACAATTCTCGTTCTT 919 Query 19487 TACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAA 19546 |||| |||||| | |||||||| ||| | || | | ||||| ||||| | | | | Sbjct 920 TACACTTCTTTCCAGTTGCTTGGCTTGTAATAGGTACTGGGTTTACCGCCTTAGATATTA 979 Query 19547 GCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCA----GTCCCTTCTTGACAAC 19602 |||| | ||| || ||||| || | ||||| || || | || || | | ||| Sbjct 980 GCACTACGGCTTTTAACTTAAAGGATTTTAATTTCAATTACTTTGTAGCTGATGGTCAA- 1038 Query 19603 AATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAG 19662 ||| |||| ||| ||||||||||||| || | || | ||| || || | | | Sbjct 1039 ---GGTTGTGTAATTAATACTTGGGCTGATATCATTAACCATGCCAATCTTCGTATGAAA 1095 Query 19663 GTAATGCACGAAC-------GTAATG--CTCATAACTTCCC 19694 || ||||| || | |||||| |||||||||||| Sbjct 1096 GTTATGCATGAGCGACGGGAGTAATGGTATCATAACTTCCC 1136 >seq1619 Length=8420 Score = 100 bits (110), Expect = 8e-17 Identities = 240/356 (67%), Gaps = 8/356 (2%) Strand=Plus/Plus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 |||||| ||||| ||||||| || || |||||||| || || |||||||| || Sbjct 2762 TTTTGTAACTGGATAACCAGCGTTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTGTG 2821 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACC 18842 ||||| || | || | | | ||| ||||| || ||||| || || |||||||| || Sbjct 2822 ATGATCCC-TACCTTATGACTCCAACT-TTTGTATTTATTATCGCTTTTATTGCTGC-CC 2878 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 || ||||| |||||||| || || || | |||| || ||| |||||| ||||||| Sbjct 2879 TCTAGTAGATATTGATGGTATTCGTGAACTTGTTTTTGGATCTCTACTTTATAGAAACAA 2938 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCCA 18960 || || | || | |||| | | |||| | || || | ||||| ||| || Sbjct 2939 TATTATTTTTGGTTTTATTATTCCTACTTCTGCAA--CTATAGGTTTGCACTTTTACTCA 2996 Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020 || || ||| ||| ||||||||||||| ||||| || || || | | | Sbjct 2997 ATCTGAAAAGTGGCTTCTGTTGATGAATGGCTATACAATGGTGGTCCTAATGAGTTAATT 3056 Query 19021 GTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAG 19076 || | |||||| | |||| || | ||| ||| | | |||||||||||||| Sbjct 3057 GTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGAGCCATGAGTGGGAACTTAG 3112 >seq303336 Length=741 Score = 95.1 bits (104), Expect = 3e-15 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 |||||| ||| | ||| ||| || || ||| ||||||| || || |||||||| || Sbjct 531 TTTTGTAACTAGATAATCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTG 590 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACC 18842 ||||| || | || | || ||| | ||| || ||||| | ||||||||| | || Sbjct 591 ATGATCCCTACCTTACTAACCGCAACT-TCTGTATTTATTATCACTTTCATTGCTACCCC 649 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 || ||| | |||||||| || || || ||| || | || ||| |||||||||||||| Sbjct 650 TCTGGTACATATTGATGGTATTCGTGAACCTATTTCTGGATCTCTACTTTATGGAAACAA 709 Query 18903 CATCATATCGGGAGCCGTCGTTCC 18926 || || || || ||| | |||| Sbjct 710 TATTATTTCTGGTGCCATTATTCC 733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140485005864450