Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq33053 107 2e-18 seq86164 102 7e-17 seq148231 98.7 8e-16 >seq33053 Length=1800 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | || || | |||| || | ||| || || || || || ||||||||| Sbjct 1566 CCTCCCCTCAGCCTGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCT 1507 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||| ||||||||||| |||||| | || |||||||| || || || || Sbjct 1506 AGGGTTCGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGG 1447 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||||| || | | || | ||||| | || || || Sbjct 1446 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTGTCGGAGGACTCGACC 1387 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 ||||| ||||| | |||||||| || |||||||| ||||| ||||| | |||| Sbjct 1386 TCTAGGGTTATGGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGCATGGTTGCT 1333 >seq86164 Length=2128 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | |||||| || |||||||| ||||| || | | | || |||| ||| Sbjct 124 ACCAAATGGAGCGTAGACTCCTTTTGAATGTTGTAATCAGCAAGGGTTCGGCCGTCCTCG 183 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| | || || | ||| || || || || | |||||| || || | Sbjct 184 AGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGG 243 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | | || | ||||| | | ||| || || || || || | || Sbjct 244 ATCTTAGCTTTGACATTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATGGTCTTT 303 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||||||||||||||| ||||| Sbjct 304 CCGGTAAGAGTTTTCACAAAGATCTGCAT 332 >seq148231 Length=1271 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | ||||| ||| | ||| || || || || || ||||||||| Sbjct 235 CCACCGCGAAGACGAAGTACCAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCT 176 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||||||||||||||| |||||| | || || || || || || || || Sbjct 175 AGGGTTCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGGCGTTGCTGGTCAGGAGGG 116 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||||| || | | | || | ||||| | | || || Sbjct 115 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACC 56 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||||||| | ||||| || || ||||| || ||||| ||||| Sbjct 55 TCGAGAGTTATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 9 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | || | |||||||| | || || || || || ||||| ||| | Sbjct 919 CCTCCACGTAGACGGAGGACCAAATGAAGAGTGCTCTCCTTCTGGATGTTGTAATCGGCC 860 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||| || | ||| || |||||| | || || | ||| || ||||| || Sbjct 859 AAGGTACGACCGTCCTCCAACTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGA 800 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| |||| | | |||| ||||| | || ||| Sbjct 799 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCTATGGTGTCCGAACTCTCGACT 740 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 ||||| || || | ||||| || || |||||||||||||| |||||| || Sbjct 739 TCTAGGGTAATGGTCTTGCCGGTAAGGGTTTTCACAAAGATCTGCATACCT 689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422883430879800