Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq237122 150 2e-31 seq265020 134 2e-26 >seq237122 Length=485 Score = 150 bits (166), Expect = 2e-31 Identities = 312/455 (69%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || ||||| |||||||||||||||||||| |||||||| | ||| ||| |||||| Sbjct 461 TACTCCCCGACCCGCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTCCATC 402 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACT--CCAATCTGTTTGAGGAGAC 129845 ||||||| ||||||| || ||| || || | | || | | | | || | Sbjct 401 CAATCAAACGGGTTCT--GAACACCATATACCTTCCCGTACCCTAGCGCTCGCAACAGCC 344 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 |||| | ||| |||| ||||||| |||| | | |||||| |||| | | Sbjct 343 GATCGGCAACGAACTCGATGTACTGGCTCATCAACGCACCGTTCATCCCGACCAACGCGC 284 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | || |||||||| ||| ||| || |||| || ||||| || || || ||||| || | Sbjct 283 ACGGCAGCGCGTCGCAGACAAACTCCCTCTCGATCTCCACCGCGTCGCGAACGATCGCCT 224 Query 129966 -GAATGGTCTCCGTGC-CAGGTCTATTGCGCA--AAGTCTTGAAGAGTTCCACGGCAAAC 130021 || | | |||| || ||| | | || | || | | | ||| | | ||||| Sbjct 223 TGACTCG-CTCCTCGCTCAGCT-TCTTTCTCAGGAGGGAGTAAAGCAGGCAA--GCAAAG 168 Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081 || ||| ||||| ||||| || ||||| || || || |||||| || || |||||| Sbjct 167 TCGCAGTGCAGACCTTCGTCTCGTGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATG 108 Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 130141 || || || ||||| | ||||||||| || || || || |||||||||||||| || Sbjct 107 AGGCCTCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCTTCG 48 Query 130142 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176 || || ||||| || | |||||||| || ||||| Sbjct 47 ACGCAGGCGAAGGCGATCAGACGCTCGGCGAAGGA 13 >seq265020 Length=820 Score = 134 bits (148), Expect = 2e-26 Identities = 306/453 (68%), Gaps = 8/453 (2%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || ||||| |||| ||||||||||||||| |||||||| | ||| ||| |||||| Sbjct 461 TACTCCCCGACCCTCTTCTCGAAGAAGTTGGTCTTCCCCTGCAACGAGATCAGCTCCATC 402 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACT--CCAATCTGTTTGAGGAGAC 129845 ||||||| ||||||| || || | || | | || | | | || | Sbjct 401 CAATCAAACGGGTTCT--GAACACCGTACACCTTCCCGTACCCTAGCGCACCCAACAGCC 344 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | || | |||| |||| ||||| | | |||| || |||||| |||| | || Sbjct 343 GGTCGGCGACGAACTCGATGTATTGACTCATCAAGGCGCCGTTCATCCCGACCAACGCAC 284 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 |||| |||||||| | | ||| || |||| || ||||| || || || ||||| || | Sbjct 283 ATGGTAGCGCGTCGCACACAAACTCCCTCTCGATCTCCACCGCGTCGCGGACGATAGCCT 224 Query 129966 -GAATGGTCTCCGTGC-CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 || | | |||| || ||| | | || | || | | | | || ||| || || Sbjct 223 TGACTCG-CTCCTCGCTCAGCT-TCTTCCTCAGAAGCGAGTAAAGAAGGCAGGCGAAATC 166 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| || || ||||| || ||||| || || || |||||| || || |||||||| Sbjct 165 GCAGTGCAGGCCTTCGTCTCGCGAGATCAGCTCGTTGGAGAAGGTGAGTCCCGGCATGAG 106 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 || || ||||| | ||||||||| || || || || |||||||||||||| || || Sbjct 105 GCCTCGTTTCTTGAGCCAGAAAATGGCGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGAC 46 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176 || ||||| || | |||||||| || ||||| Sbjct 45 GCAGGCGAAGGCGATCAGACGCTCGGCGAAGGA 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615373752499000