Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Artocarpus_20camansi_20[genbank_20GCA_5F002024485.1_202017-03-09] 396,025 sequences; 631,307,653 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq388548 91.5 7e-14 seq200892 91.5 7e-14 >seq388548 Length=2643 Score = 91.5 bits (100), Expect = 7e-14 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 |||||||||||||| || |||||||| | | |||||||||||| || | | ||| | Sbjct 212 CGTGTTCCAAACTGGCCGTTTGGCATGAGAAGATTAATATTGTTGCTGCCTACATAATCC 153 Query 65147 TGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGT 65206 || |||||||| || || | | | |||| ||||| || || || |||||||| Sbjct 152 TGCGCCATTCCAATGATAGTACTAGCGAGACTCTGCTCACCATGGTGGTAGGCTGAATGT 93 Query 65207 TCAGAGACATATCCACTAAATTGAGCAACTTTT 65239 ||||| ||||| ||| ||| ||||| || ||| Sbjct 92 TCAGAAACATAACCAGAAAACTGAGCGACCTTT 60 >seq200892 Length=7226 Score = 91.5 bits (100), Expect = 7e-14 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 ||||| |||||||| ||||||||||| | | |||||||||||| ||| | | ||| Sbjct 373 CGTGTCCCAAACTGGCCATTTGGCATGAGAAGATTAATATTGTTGCTACCGACATAATCT 314 Query 65147 TGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGT 65206 || |||||||| || || | | | |||| ||||| || || || |||||||| Sbjct 313 TGTGCCATTCCAATGATAGTACTAGCGAGACTCTGCTCACCATGGTGGTAGGCTGAATGT 254 Query 65207 TCAGAGACATATCCACTAAATTGAGCAACTTTT 65239 ||||| ||||| ||| ||| ||||| || ||| Sbjct 253 TCAGAAACATAACCAGAAAACTGAGCGACCTTT 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234542477591250