Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq34486 113 5e-20 >seq34486 Length=7597 Score = 113 bits (124), Expect = 5e-20 Identities = 122/159 (77%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 21473 AAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTT 21532 || || ||||| |||||||| | ||| || ||||| || || || || || || ||| Sbjct 4073 AAGCAGGCAAAGTCACAATGAAGACCCTCGTCCCTCGAAATCAACTCGTTCGAGAAGGTT 4014 Query 21533 AAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGC-TCCTGAAAA 21591 |||||||||| ||| || | ||||||||||||||| ||||| ||||| || ||| || || Sbjct 4013 AAACCGGGCAATAAACCACGCTTTTTTAACCAAAAAATTGA-GCAAAAGCTTCCGGAGAA 3955 Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTC 21630 || || ||||||||| ||| || ||||| || || || Sbjct 3954 AAATATTCCCTCAACGCAAGCGAAAGCAACCAAACGCTC 3916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530425739350200