Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03]
221,855 sequences; 236,770,010 total letters
Query= NC_008725.1
Length=111953
Score E
Sequences producing significant alignments: (Bits) Value
seq31911 87.8 1e-12
seq53181 86.0 4e-12
>seq31911
Length=2244
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892
|||||| |||||| | ||||| |||| || ||||||||||| | || ||| | |
Sbjct 822 AATGCAGATATTTGTGAAAACTCTAACTGGGAAAACCATTACATTAGAGGTGGAGAGCTC 763
Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952
|| || | | | || | ||| || || || || || ||| | || | ||||
Sbjct 762 GGATACCATTGACAATGTGAAGGCCAAGATACAGGACAAGGAAGGTATTCCCCCAGACCA 703
Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012
||||| | |||||||||||||| ||||| |||||| || |||| || |||||
Sbjct 702 GCAGAGGTTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGGCAGACTACAA 643
Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060
|| ||||||||||| || ||||| |||| | ||| | || || ||
Sbjct 642 CATCCAGAAGGAATCAACCCTTCACTTGGTGCTTCGTCTCCGTGGTGG 595
>seq53181
Length=15488
Score = 86.0 bits (94), Expect = 4e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010
|| |||||||||||||| || || || ||| | ||||| | ||| |||||||||||
Sbjct 6314 CAGCAGAGACTTATCTTCGCCGGTAAGCAATTGGAAGACGGCAGAACGTTGGCCGATTAC 6255
Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045
|||||||||||||| ||||| |||||| | || ||
Sbjct 6254 AATATTCAGAAGGAGTCTACCCTTCATCTTGTTTT 6220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357156481461670
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |