Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4370 143 6e-29 seq53181 134 3e-26 seq23310 131 4e-25 seq31910 118 2e-21 seq31911 105 2e-17 seq34486 87.8 4e-12 >seq4370 Length=4242 Score = 143 bits (158), Expect = 6e-29 Identities = 165/221 (75%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 ||||| || || | |||| ||| ||| |||||||| || |||||||| || || || Sbjct 2773 AGTCTGAGGACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCAAGGGTCCGC 2832 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || ||||| | || |||||||| ||||||| | || || ||| ||||| || Sbjct 2833 CCATCTTCGAGCTGCTTTCCTGCAAAGATCAACCTTTGCTGGTCTGGTGGAATTCCCTCC 2892 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGC 288432 |||||||||||||| ||||||||||| || || | ||| |||| || || || | Sbjct 2893 TTATCCTGGATTTTAGCTTTCACGTTATCGATGGTATCTGAGCTC---TCCACCTCCAAA 2949 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| |||||||| || |||||||||||||| |||||||| Sbjct 2950 GTGATGGTCTTCCCCGTGAGAGTCTTGACGAAGATCTGCAT 2990 Score = 118 bits (130), Expect = 2e-21 Identities = 168/234 (72%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || | ||||| ||| || || ||||| || ||||| || Sbjct 2307 TCCACCACGGAGACGAAGCACCAAATGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGC 2366 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || ||||| | ||| ||||| || || |||| | ||| || ||||| Sbjct 2367 CAGGGTGCGACCATCTTCCAGTTGCTTTCCGGCAAAAATCAACCTCTGCTGG---TCTGG 2423 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 | || ||||| |||||||||||||| || ||||| || || || | || |||| Sbjct 2424 GGGAATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTGTCAATGGTGTCTGAGCTC-- 2481 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| ||||| ||||| || ||||| || || || ||||| Sbjct 2482 -TCCACCTCCAAAGTGATAGTCTTACCGGTGAGGGTCTTCACAAAAATTTGCAT 2534 Score = 118 bits (130), Expect = 2e-21 Identities = 166/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| || || || | || | ||| ||| || ||||| ||||| | Sbjct 2988 CATG-CCACCACGGAGCCTGAGCACCAAGTGCAGGGTGGATTCCTTCTGGATGTTATAAT 3046 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || ||||| | || || || |||||||||| | ||| || Sbjct 3047 CTGCCAGGGTGCGGCCATCTTCAAGCTGCTTACCGGCGAAGATCAACCTCTGCTGGTCTG 3106 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||||||| || || ||||||||||| || || || || || || | |||| || Sbjct 3107 GTGGGATTCCCTCCTTGTCCTGGATTTTAGCCTTAACATTATCAATTGTATCGGAGCTTT 3166 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || | || || ||||| ||||| || || |||||||| |||||||| Sbjct 3167 CCACCTCCAAAGTAATTGTCTTTCCGGTGAGGGTTTTGACGAAGATCTGCAT 3218 Score = 109 bits (120), Expect = 1e-18 Identities = 166/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | |||| ||| || || ||||| || || ||||| Sbjct 2536 CCACCACGGAGACGGAGCACCAAGTGAAGTGTGGACTCCTTCTGGATGTTGTAATCGGCC 2595 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||| || || || || |||| | ||| || |||||| Sbjct 2596 AGGGTACGACCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGCTGG---TCTGGG 2652 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || ||||| ||||||||||| || || |||||||| || || | || |||| Sbjct 2653 GGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATCGTGTCCGAGCTC--- 2709 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || | || || ||||| || || ||||||||||| ||||| |||||| Sbjct 2710 TCCACCTCCAAAGTAATAGTCTTGCCCGTGAGAGTCTTGACAAATATTTGCATT 2763 >seq53181 Length=15488 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| || | || ||||||| || || || || || || |||||||| Sbjct 5977 CCACCGCGGAGCCTCAAAACAAGATGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCC 6036 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | |||||||| || || || || |||||||||| ||||| ||| | || Sbjct 6037 AAAGTTCTGCCGTCTTCCAACTGCTTACCGGCGAAGATCAAGCGCTGCTGATCAGGAGGA 6096 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| |||||||| || || || || ||||| || |||| ||| ||| ||| Sbjct 6097 ATTCCTTCCTTATCCTGAATCTTAGCCTTAACGTTGTCGATAGTATCAGAACTTTCGACT 6156 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||||||||| ||||| || || ||||| ||||| ||||| Sbjct 6157 TCCAAGGTGATCGTCTTACCGGTGAGGGTTTTGACAAATATTTGCAT 6203 Score = 132 bits (146), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| || | || ||||||| || || || || ||||| || ||||| Sbjct 6205 CCACCGCGGAGCCTCAAAACAAGATGAAGGGTAGACTCCTTCTGAATATTGTAATCGGCC 6264 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||| | |||||||| ||||| || || |||||||| || | ||| ||| | || Sbjct 6265 AACGTTCTGCCGTCTTCCAATTGCTTACCGGCGAAGATAAGTCTCTGCTGATCAGGAGGA 6324 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT--A 288424 ||||| || || ||||| || ||||| || ||||| || || | || || | ||| | Sbjct 6325 ATTCCCTCCTTGTCCTGAATCTTCGCCTTAACGTTGTCGATGGTAT--CTGAACTCTCGA 6382 Query 288425 CTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||| ||||||||||| ||||| || || || ||||| |||||||| Sbjct 6383 CCTCGAGAGTGATCGTCTTACCGGTTAGGGTTTTAACGAAGATCTGCAT 6431 Score = 118 bits (130), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || || | |||||||| | || || || ||||||||||| ||||| Sbjct 5749 CCACCGCGAAGCCTCAAGACGAGATGTAAGGTAGACTCCTTCTGGATATTATAATCGGCC 5808 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | |||||||| || || || || || |||||||| ||||| ||| | ||| Sbjct 5809 AAGGTTCTCCCGTCTTCCAACTGCTTCCCGGCAAAGATCAGGCGCTGCTGATCAGGAGGG 5868 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || ||||| || || || || ||||| || || | ||| ||| || Sbjct 5869 ATCCCTTCCTTGTCCTGAATCTTAGCCTTAACGTTGTCGATTGTATCAGAACTC---TCG 5925 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | || || ||||| || || ||||| ||||| ||||| ||||| Sbjct 5926 ACTTCCAAGGTAATAGTCTTACCTGTGAGAGTTTTGACAAATATTTGCAT 5975 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || || |||| ||| || ||||| || ||||| ||||| Sbjct 5521 CCACCTCTGAGACGCAGCACCAGGTGAAGGGTGGACTCCTTTTGTATGTTATAATCGGCC 5580 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || |||||||| || ||||||||||| || || || || | |||||| || ||| Sbjct 5581 AATGTTCGTCCGTCCTCCAATTGTTTTCCAGCAAAAATAAGTCTCTGTTG---GTCCGGG 5637 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| ||||| || ||||| || || ||||| || || | ||| ||| Sbjct 5638 GGAATCCCTTCCTTATCTTGAATTTTTGCCTTGACGTTATCGATGGTATCAGAACTTTCA 5697 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || |||||||| || || ||||| || || ||||| ||||| Sbjct 5698 ACCTCAAGAGTAATCGTCTTACCTGTGAGAGTTTTAACAAATATTTGCAT 5747 >seq23310 Length=1212 Score = 131 bits (144), Expect = 4e-25 Identities = 174/239 (73%), Gaps = 12/239 (5%) Strand=Plus/Plus Query 288241 ACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAG 288300 |||| ||||| | || | ||| || || || | ||| |||||||||||||||||| Sbjct 474 ACATAACCACCTCTCAGGCGAAGAACAAGGTGGAGGGTGGACTCTTTTTGGATATTATAG 533 Query 288301 TCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAA 288360 || || || || ||||| || || | ||||| || ||||| ||||||||||| || | Sbjct 534 TCAGCAAGGGTTCGTCCATCGTCGAGCTGTTTGCCAGCGAAAATCAGACGCTGCTG---A 590 Query 288361 TCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---G 288414 ||| || || ||||| || ||||| || || || || || || || |||| || | Sbjct 591 TCTGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCTTAACATTGTCAATAGTGTCTGAG 650 Query 288415 CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || ||||| | || || |||||||| |||| ||||| |||||||||||||| Sbjct 651 CTC---TCCACTTCCAAAGTAATGGTCTTCCCAGTCAATGTCTTCACGAATATCTGCAT 706 Score = 96.9 bits (106), Expect = 8e-15 Identities = 162/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | || | || || | ||||| || |||||| |||||||| |||| Sbjct 932 CATG-CCACCCCTCAGCCGCAGCACTAAATGAAGAGTTGATTCTTTCTGGATATTGTAGT 990 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || ||||| || | |||||| || ||||| |||| | ||| ||| Sbjct 991 CAGCAAGGGTACGACCGTCCTCCAGTTGTTTACCAGCGAAAATCAACCTCTGCTGATCTG 1050 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||| ||||| || || || || || | || || || || || | || || Sbjct 1051 GTGGGATACCTTCCTTGTCTTGAATCTTTGTCTTGACATTGTCAATGGTGTCTGAACTTT 1110 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | || || || ||||| ||||||||||| | ||||| || || || |||||| Sbjct 1111 CCACCTCAAGAGTGATGGTCTTCCCGGTTAAGGTCTTAACAAAGATTTGCATT 1163 Score = 89.7 bits (98), Expect = 1e-12 Identities = 165/238 (69%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | |||| || || | ||||| || ||| || |||||||| |||| Sbjct 704 CATG-CCACCCCTCAGTCGCAGCACCAAATGAAGAGTCGATTCCTTCTGGATATTGTAGT 762 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || | || || || | || ||||| || || |||| || || ||| | Sbjct 763 CAGCAAGGGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAAGCGTTGCTGA---T 819 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 |||| || ||||| || ||||| || || | || || || || || | || || Sbjct 820 CTGGAGGAATGCCTTCCTTGTCCTGAATCTTGGTCTTGACATTATCAATGGTGTCTGAGC 879 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| | ||||| ||||| || |||| |||||| |||||||||||||| Sbjct 880 TC---TCCACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTCACGAATATCTGCAT 934 >seq31910 Length=2189 Score = 118 bits (130), Expect = 2e-21 Identities = 172/239 (72%), Gaps = 13/239 (5%) Strand=Plus/Plus Query 288241 ACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAG 288300 |||| |||||| ||||| | ||| || || |||| ||| ||| || |||||||| ||| Sbjct 353 ACAT-TCCACCACGGAGACGAAGGACAAGGTGAAGGGTGGATTCCTTCTGGATATTGTAG 411 Query 288301 TCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAA 288360 || || || ||||| || ||||| | ||| || || || ||||||| | ||| || Sbjct 412 TCTGCCAGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGG--- 468 Query 288361 TCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---G 288414 |||||| || ||||| ||||||||||| || |||||||| || || || | ||| | Sbjct 469 TCTGGGGGAATGCCTTCCTTATCCTGGATCTTAGCTTTCACATTATCAATGGTATCCGAG 528 Query 288415 CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || | || || || ||||| || || || || || || || ||||| Sbjct 529 CTC---TCCACCTCCAATGTTATGGTTTTCCCAGTGAGTGTTTTAACAAAAATTTGCAT 584 Score = 113 bits (124), Expect = 1e-19 Identities = 167/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | |||| || ||| || ||||| || ||||| || Sbjct 586 CCACCACGGAGACGAAGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCC 645 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| || || || ||||||| | ||| || || ||| Sbjct 646 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGG---TCGGGG 702 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || ||||| |||||||||||||| |||||||| || || || | ||| |||| Sbjct 703 GGAATGCCTTCCTTATCCTGGATTTTAGCTTTCACATTATCAATGGTATCCGAGCTC--- 759 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || | || || || || || || ||||| || || |||||||||||| Sbjct 760 TCCACCTCTAATGTTATGGTTTTTCCTGTGAGAGTTTTCACAAATATCTGCATT 813 Score = 98.7 bits (108), Expect = 2e-15 Identities = 157/223 (70%), Gaps = 12/223 (5%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 |||||| || | |||| || ||| || || || || ||||| || || || ||||| Sbjct 825 TCTAAGGACCAAGTGAAGAGTTGATTCCTTCTGAATGTTGTAGTCTGCAAGGGTCCGTCC 884 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTC 288374 ||||| | || ||||| || ||||||| | ||| || |||||| || ||||| Sbjct 885 ATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGG---TCTGGGGGAATGCCTTC 941 Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAG 288431 |||||||| || || || ||||| || || || | ||| |||| || || || || Sbjct 942 CTTATCCTGAATCTTGGCCTTCACATTGTCAATTGTATCCGAGCTC---TCCACCTCTAG 998 Query 288432 CGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || | || ||||| || ||||| || || |||||||||||| Sbjct 999 TGTTACGGTTTTCCCAGTGAGAGTTTTCACAAATATCTGCATT 1041 Score = 91.5 bits (100), Expect = 3e-13 Identities = 155/222 (70%), Gaps = 12/222 (5%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 |||||| || | |||| || ||| || || || || ||||| || || || ||||| Sbjct 1053 TCTAAGAACCAAGTGAAGGGTTGATTCCTTCTGAATGTTGTAGTCTGCAAGAGTCCGTCC 1112 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTC 288374 ||||| | || ||||| || ||||||| | ||| || |||||| || ||||| Sbjct 1113 ATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGG---TCTGGGGGAATACCTTC 1169 Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAG 288431 || ||||| || || || ||||| || || || | ||| |||| || || || | Sbjct 1170 CTTGTCCTGAATCTTGGCCTTCACATTGTCAATGGTATCCGAGCTC---TCCACCTCCAA 1226 Query 288432 CGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| || || || ||||| || ||||| Sbjct 1227 TGTTATGGTCTTCCCGGTGAGGGTTTTCACGAAAATTTGCAT 1268 >seq31911 Length=2244 Score = 105 bits (116), Expect = 2e-17 Identities = 169/239 (71%), Gaps = 13/239 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | ||| || | |||| || ||| || ||||| || |||| Sbjct 591 CATG-CCACCACGGAGACGAAGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAGT 649 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || ||||| | ||| || || || ||||||| | ||| || | Sbjct 650 CTGCCAGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGG---T 706 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 ||||| || ||||| || ||||| || || || ||||| || || || | ||| || Sbjct 707 CTGGGGGAATACCTTCCTTGTCCTGTATCTTGGCCTTCACATTGTCAATGGTATCCGAGC 766 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || | || || || ||||| || ||||| || || |||||||||||| Sbjct 767 TC---TCCACCTCTAATGTAATGGTTTTCCCAGTTAGAGTTTTCACAAATATCTGCATT 822 Score = 104 bits (114), Expect = 5e-17 Identities = 158/221 (71%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 |||||| || | ||||| || |||||| || || || ||||| || || || ||||| Sbjct 834 TCTAAGGACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAGTCTGCAAGGGTCCGTCC 893 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATT-CCTTCTT 288376 ||||| | || ||||| || ||||||| | ||| || | | |||| | ||||| | Sbjct 894 ATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTG-GTCTGAGGGAATACCTTCCT 952 Query 288377 TATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCG 288433 ||||||| || || || || || || || || | ||| |||| || || || || | Sbjct 953 TATCCTGTATCTTGGCCTTTACATTGTCAATGGTATCCGAGCTC---TCCACCTCTAGTG 1009 Query 288434 TGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | || || || ||||| ||||| || || |||||||||||| Sbjct 1010 TTATGGTTTTTCCGGTGAGAGTTTTCACAAATATCTGCATT 1050 Score = 100 bits (110), Expect = 7e-16 Identities = 157/222 (71%), Gaps = 12/222 (5%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 |||||| || | ||||| || |||||| || || || ||||| || || || ||||| Sbjct 1062 TCTAAGGACCAAATGAAGGGTTGATTCTTTCTGAATGTTGTAGTCTGCAAGGGTCCGTCC 1121 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTC 288374 ||||| | || ||||| || ||||||| | ||| || |||||| || ||||| Sbjct 1122 ATCTTCAAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGG---TCTGGGGGAATACCTTC 1178 Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAG 288431 |||||||| || || || || || || || || | ||| |||| || || || | Sbjct 1179 CTTATCCTGTATCTTGGCCTTAACATTGTCAATGGTATCCGAGCTC---TCCACCTCCAA 1235 Query 288432 CGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||| || || || ||||| || ||||| Sbjct 1236 TGTTATGGTCTTCCCGGTGAGGGTTTTCACGAAAATTTGCAT 1277 >seq34486 Length=7597 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/192 (70%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 268461 GTTTCCCATTCAATATCATGATCTGTGGAACATGTACAAGAAGGCAGTGGCAACCTTTTG 268520 ||| || || ||||| | ||| | ||| | |||||||||||||| | ||| |||| || Sbjct 3498 GTTCCCAATCCAATACCCTGAGATTTGGGAGATGTACAAGAAGGCTGAGGCTTCCTTCTG 3557 Query 268521 GACCACCGAGGAAGTTCCTCTTAACGCAGACGTTGCAGACTGGCGTGAGAAACTGAACAA 268580 ||| |||||||||| ||| | ||| ||| | | ||| || ||||| | | Sbjct 3558 GACTGCCGAGGAAGTCGATCTCTCTGTAGATGTTTCCCAGTGG---GAAAAACTTACCCC 3614 Query 268581 CGATGAACGACACTTCATCAAACATATTCTGGGGTTCTTTGCAGGCTCCGACGGTATCGT 268640 ||||||||||||||| || | || |||| | |||||||| | || || || || || Sbjct 3615 CGATGAACGACACTTTATTACTCACGTTCTTGCCTTCTTTGCCGCTTCAGATGGCATTGT 3674 Query 268641 GATGGAAAATCT 268652 |||| ||||| Sbjct 3675 TCTGGAGAATCT 3686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176301212092690