Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq16897 86.0 1e-11 >seq16897 Length=1945 Score = 86.0 bits (94), Expect = 1e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 30967 GAAGGCCCACGAATGTTCCTTGCGAATTGCTTCTTCTTCCTCGGGTGTGATCTCGTTTTC 31026 ||||||||| | || ||| | |||| | |||||||| || || || | || |||| Sbjct 817 GAAGGCCCAGGCATTCTCCCTACGAACCTCCTCTTCTTCTTCAGGGGTAAAATCATTTTT 758 Query 31027 GATACCGAACACTTTTCGAATCTCTTCCGGAGtttttccttttattttttCAGCGATAGC 31086 || ||| ||| || ||||| || ||||| || ||||| || | ||||||| || Sbjct 757 TATGTTGAAAGTTTTGCGGATCTCCTCAGGAGTCTTGCCTTTGATCATGTCAGCGACAGT 698 Query 31087 TTGACATAGAACATCAAGCATACTCTTTATGTTCAAGAAATTCGC 31131 |||||| | ||| | || |||||||||||||||| |||| || Sbjct 697 TTGACAAGTGAGATCCAACAGACTCTTTATGTTCAAGTAATTTGC 653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1099745044644250