Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq34486 93.3 5e-14 >seq34486 Length=7597 Score = 93.3 bits (102), Expect = 5e-14 Identities = 181/263 (69%), Gaps = 7/263 (3%) Strand=Plus/Minus Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591 || ||||||||||| | || || | || ||||||||| | ||| |||| | ||| Sbjct 4055 TGAAGACCCTCGTCCCTCGAAATCAACTCGTTCGAGAAGGTTAAACCGGGCAATAAACCA 3996 Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651 ||||| || ||||| ||||| | ||||| || ||||| || || ||||| || || Sbjct 3995 CGCTTTTTTAACCAAAAAATTGAGCAAAAGCTTCCGGAGAAAAATATTCCCTCAACGCAA 3936 Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGGA-GCGGGACTTTGTATCAAACCACTTCATCGC 127710 ||||| |||| | ||||||||| ||||| | | | | ||| ||| | | || Sbjct 3935 GCGAAAGCAACCAAACGCTCGGCGAAGGATTCTGAGCCGTCTAT----CCATTGGAGGGC 3880 Query 127711 CCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 127770 ||||| || || || || | || |||| ||||| ||| || | |||||| | ||| Sbjct 3879 CCACTTGGCTTTCTTTTCCACGCAAGGGATGGTCTCGATTGCGTGAAAGAGCCTGTGCTT 3820 Query 127771 TTCTGATGG-ATCTTTGATGTAC 127792 || | ||| ||| || |||||| Sbjct 3819 CTC-GTTGGAATCCTTAATGTAC 3798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611805829501800