Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq34486 95.1 2e-14 >seq34486 Length=7597 Score = 95.1 bits (104), Expect = 2e-14 Identities = 188/273 (69%), Gaps = 8/273 (3%) Strand=Plus/Minus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 |||||||| ||||| | |||||| || || || || || || ||||| || | |||||| Sbjct 3779 TACATCTCGGAGTGAATATTCTCGATGGCTATTTGAAAACCATAGAAAGCACGGGCCTCG 3720 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGA 48543 | ||||| || || | ||| | || || |||||||| || || |||||||| Sbjct 3719 GAAACCTGGACCTCCTTCATGAAACGA-CCGGCGAGATTCTCCAGAACAATGCCATCTGA 3661 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 ||| |||||||||||||| || || ||| || || || || | | |||| || || Sbjct 3660 AGCGGCAAAGAAGGCAAGAACGTGAGTAATAAAGTGTCGTTCATCGGGGGTAAG-TTTTT 3602 Query 48604 CCAGCCCTG---TACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAG 48660 || | ||| || ||| || || ||||| || ||||||||||||| || Sbjct 3601 CC--CACTGGGAAACATCTACAGAGAGATCGACTTCCTCGGCAGTCCAGAAGGAAGCCTC 3544 Query 48661 TGCTTTTTTGTACATGCCCCATATGTCCGGATA 48693 || || |||||||| |||| || || || || Sbjct 3543 AGCCTTCTTGTACATCTCCCAAATCTCAGGGTA 3511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928949484883200