Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq34486 125 9e-23 >seq34486 Length=7597 Score = 125 bits (138), Expect = 9e-23 Identities = 191/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| || ||||||||||| || || || || || || || | |||| | || ||| Sbjct 3770 GAGTGAATATTCTCGATGGCTATTTGAAAACCATAGAAAGCACGGGCCTCGGAAACCTGG 3711 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 |||||||||||||| || ||||| || ||||| || ||||| || ||||| || Sbjct 3710 ACCTCCTTCATGAAACGACCGGCGAGATTCTCCAGAACAATGCCATCTGAAGCGGCAAAG 3651 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || || ||||| | |||||||| || || ||| | | || |||| ||| Sbjct 3650 AAGGCAAGAACGTGAGTAATAAAGTGTCGTTCATCGGGGGTAAGTTTTTCCCACTGGGAA 3591 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 || | ||| || || |||||||| ||||||| || ||||| ||||| |||||| Sbjct 3590 ACATCTACAGAGAGATCGACTTCCTCGGCAGTCCAGAAGGAAGCCTCAGCCTTCTTGTAC 3531 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 |||||||| | | |||| |||| ||||| Sbjct 3530 ATCTCCCAAATCTCAGGGTATTGGATTGGGAA 3499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6088932739753035