Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq42083 120 3e-22 seq53181 118 1e-21 seq24190 109 5e-19 seq23310 105 6e-18 seq4370 105 6e-18 seq31910 95.1 1e-14 seq31911 93.3 4e-14 >seq42083 Length=68989 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| || || ||||| | | || |||||||||||| Sbjct 15157 ATGCAAGGTTGACTCCTTCTGGATGTTATAATCAGCTAGGGTCCTGCCGTCCTCGAGCTG 15216 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| ||| | |||||||||||||| || || |||||||| ||||| || ||||| Sbjct 15217 CTTGCCGGCGAAGATGAGCCGCTGCTGATCTGGCGGGATGCCCTCCTTATCCTGTATCTT 15276 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | |||| || |||| || ||| || || | || | ||| || ||||| Sbjct 15277 AGCCTTGACATTGTCAATGGTATCGGAGGACTCAACCTCCAAAGTAATGGTCTTACCGGT 15336 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| ||||| |||||||| Sbjct 15337 TAGGGTTTTCACGAAGATCTGCAT 15360 >seq53181 Length=15488 Score = 118 bits (130), Expect = 1e-21 Identities = 151/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||||||||| ||||| ||||| |||||| | | ||| ||| |||||| ||| Sbjct 6456 ATGGAGGGTGGACTCCTTCTGAATATTATAATCGGCAA--GTGTACGGCCGTCCTCAAGC 6513 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || || | ||||| |||||||| || |||||||||||||||||||| |||| Sbjct 6514 TGTTTACCGGCAAATATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCTTGGATC 6573 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | || |||| ||| || |||| || | || || ||| Sbjct 6574 TTAGTCTTGACATTATCGATGGTATCGGAACTCTCGACTTCGAGAGTAATTGTCTTACCG 6633 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| || || |||||||| Sbjct 6634 GTTAGGGTTTTGACAAAGATCTGCAT 6659 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||||| ||| ||||| ||||| ||||| |||||| ||| || | ||| || | ||| Sbjct 5772 ATGTAAGGTAGACTCCTTCTGGATATTATAATCGGCCAAGGTTCTCCCGTCTTCCAACTG 5831 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | || || |||||||| || |||||||| ||||||||||| ||||| Sbjct 5832 CTTCCCGGCAAAGATCAGGCGCTGCTGATCAGGAGGGATCCCTTCCTTGTCCTGAATCTT 5891 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | || || | ||| || || | ||| | || || || || Sbjct 5892 AGCCTTAACGTTGTCGATTGTATCAGAACTCTCGACTTCCAAGGTAATAGTCTTACCTGT 5951 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 |||||||| || || || ||||| Sbjct 5952 GAGAGTTTTGACAAATATTTGCAT 5975 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| |||||||||||| ||| ||| ||| || | || Sbjct 6228 ATGAAGGGTAGACTCCTTCTGAATATTGTAATCGGCCAACGTTCTGCCGTCTTCCAATTG 6287 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || ||| | || || | |||||| || ||||| || || |||||||| ||||| Sbjct 6288 CTTACCGGCGAAGATAAGTCTCTGCTGATCAGGAGGAATTCCCTCCTTGTCCTGAATCTT 6347 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | || || | ||| || |||| |||| || || ||||| Sbjct 6348 CGCCTTAACGTTGTCGATGGTATCTGAACTCTCGACCTCGAGAGTGATCGTCTTACCGGT 6407 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| ||||| |||||||| Sbjct 6408 TAGGGTTTTAACGAAGATCTGCAT 6431 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || |||||||| | | ||| | ||||| || ||||| || Sbjct 5323 GTGGACTCCTTCTGAATGTTGTAATCAGCAAGGGTGCGCCCATCCTCTAGTTGCTTCCCA 5382 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || ||||||||| |||||| || || || || || |||||||| ||||| ||| Sbjct 5383 GCAAAAATGAGCCTCTGCTGATCCGGGGGAATCCCCTCCTTGTCCTGAATCTTGGACTTC 5442 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| | | ||| || || | || | ||| || || |||| || Sbjct 5443 ACATTATCTATGGTGTCTGAGCTCTCTACTTCAAGTGTAATGGTCTTCCCAGTCAATGTC 5502 Query 133644 TTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 5503 TTCACAAAAATCTGCAT 5519 >seq24190 Length=3131 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAG 133513 ||| | ||| ||||| ||||| || |||||||| | | || || | | |||||||| Sbjct 1457 ATGCAGGGTTGACTCCTTCTGGATGTTGTAATCCGCTAGGGTCCTG--CCA-TCCTCGAG 1401 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || ||| | |||||||||||||| || || || || ||||||||||| ||| Sbjct 1400 CTGCTTTCCGGCGAAGATGAGCCGCTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGGAT 1341 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||||| | |||| ||||||| || || || || | || | || || || Sbjct 1340 TTTAGCCTTGACATTGTCAATGGTGTCGGAGGATTCAACCTCCAGAGTAATTGTCTTACC 1281 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| ||||| |||||||| Sbjct 1280 CGTTAGGGTTTTGACGAAGATCTGCAT 1254 >seq23310 Length=1212 Score = 105 bits (116), Expect = 6e-18 Identities = 145/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||||||||| || ||||| || || | | || | | | || |||||||| |||| Sbjct 509 GGTGGACTCTTTTTGGATATTATAGTCAGCAAGGGTTCGTCCA-TCGTCGAGCTGTTTGC 567 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| || |||||||| || ||||| |||||||||||||| ||||| || Sbjct 568 CAGCGAAAATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGAATCTTGGCCT 627 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | | |||||| || | || | ||| || || |||| | Sbjct 628 TAACATTGTCAATAGTGTCTGAGCTCTCCACTTCCAAAGTAATGGTCTTCCCAGTCAATG 687 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 688 TCTTCACGAATATCTGCATG 707 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | || || || ||||| |||||||| || | | || | ||||| ||| Sbjct 729 AAATGAAGAGTCGATTCCTTCTGGATATTGTAGTCAGCAAGGGTCCTCCCATCCTCAAGC 788 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || |||| | || ||||| || ||||| |||||||||||||| ||| Sbjct 789 TGCTTTCCAGCAAAAATCAAGCGTTGCTGATCTGGAGGAATGCCTTCCTTGTCCTGAATC 848 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| ||||| | | |||||| || | |||| ||| || || Sbjct 849 TTGGTCTTGACATTATCAATGGTGTCTGAGCTCTCCACTTCCAAAGTGATGGTCTTACCA 908 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| ||| || ||||| ||||||||| Sbjct 909 GTCAAAGTCTTCACGAATATCTGCATG 935 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | || || |||||||| |||||||| || | | || |||| |||||| | Sbjct 957 AAATGAAGAGTTGATTCTTTCTGGATATTGTAGTCAGCAAGGGT--ACGACCGTCCTCCA 1014 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| |||| | || |||||| || || ||||| ||||||||||| | Sbjct 1015 GTTGTTTACCAGCGAAAATCAACCTCTGCTGATCTGGTGGGATACCTTCCTTGTCTTGAA 1074 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||||| ||||| | |||| ||||| | ||||| || | |||| ||| || | Sbjct 1075 TCTTTGTCTTGACATTGTCAATGGTGTCTGAACTTTCCACCTCAAGAGTGATGGTCTTCC 1134 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| | || || || || || ||||| Sbjct 1135 CGGTTAAGGTCTTAACAAAGATTTGCAT 1162 >seq4370 Length=4242 Score = 105 bits (116), Expect = 6e-18 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || ||||||||| ||| || |||| ||| || || ||||| | Sbjct 2566 GTGGACTCCTTCTGGATGTTGTAATCGGCCAGGGT--ACGACCGTCTTCCAGTTGCTTAC 2623 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| | || ||||||||| || || ||||||||||| || |||||| || Sbjct 2624 CGGCAAAAATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCT 2683 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| |||||| | | |||||| || | || | || ||||| || |||| Sbjct 2684 TCACGTTGTCAATCGTGTCCGAGCTCTCCACCTCCAAAGTAATAGTCTTGCCCGTGAGAG 2743 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || || ||||| Sbjct 2744 TCTTGACAAATATTTGCAT 2762 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | |||||||| ||||| || ||||| || ||| ||| ||| | || || || Sbjct 2329 AAATGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGACCA-TCTTCCAG 2387 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || || |||| | || ||||||||| || || ||||||||||| || ||| Sbjct 2388 TTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTGGAT 2447 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | |||| ||||| | | |||||| || | |||| || || || Sbjct 2448 TTTGGCCTTCACATTGTCAATGGTGTCTGAGCTCTCCACCTCCAAAGTGATAGTCTTACC 2507 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || || ||||| ||||| Sbjct 2508 GGTGAGGGTCTTCACAAAAATTTGCAT 2534 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| || |||||||| | | ||| | | | || || || Sbjct 3241 AAGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCGAGGGTGCGGCCA-TCTTCAAG 3299 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || || || ||| | || | || |||||| || ||||| || |||||||| || ||| Sbjct 3300 TTGTTTACCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATACCTTCCTTATCTTGGAT 3359 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||| | | || | || || | | ||| || |||| || | |||||| || Sbjct 3360 CTTTGCCTTAACATTATCGATGGTATCCGAGCTCTCGACCTCGAGAGTAATGGTTTTTCC 3419 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || ||||||||||| || ||||| Sbjct 3420 GGTGAGGGTTTTTACGAATATTTGCAT 3446 >seq31910 Length=2189 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||| || ||||| |||||||| || ||| ||| ||| | || || || ||||||| Sbjct 387 GGTGGATTCCTTCTGGATATTGTAGTCTGCCAGGGTGCGACCA-TCTTCCAGTTGCTTGC 445 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || ||||||||| || || ||||||||||| || |||||| | Sbjct 446 CAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTGGATCTTAGCTT 505 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| || || | | |||||| || | || | |||||| || || || | Sbjct 506 TCACATTATCAATGGTATCCGAGCTCTCCACCTCCAATGTTATGGTTTTCCCAGTGAGTG 565 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| || ||||| ||||| Sbjct 566 TTTTAACAAAAATTTGCAT 584 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| || || ||||| || ||||| || ||| ||| ||| | || || || Sbjct 607 AAGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGACCA-TCTTCCAG 665 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||||| || | || | || |||||||||||| || ||||||||||| || ||| Sbjct 666 TTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCCTGGAT 725 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || || | | |||| || || | | |||||| || | || | |||||| | Sbjct 726 -TTTAGCTTTCACATTATCAATGGTATCCGAGCTCTCCACCTCTAATGTTATGGTTTTTC 784 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || |||||||| || || |||||||| Sbjct 785 CTGTGAGAGTTTTCACAAATATCTGCAT 812 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| || || ||||| || |||||||| | | || | | | || || || Sbjct 1291 AAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAGCGAGGGTACGGCCA-TCTTCAAG 1349 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || | || ||||||||| || || || ||||||||||| ||| Sbjct 1350 CTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGGAT 1409 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||| || | | ||| || |||| || | ||||| || Sbjct 1410 CTTCGCCTTAACATTGTCTATCGTATCAGAGCTCTCGACCTCGAGAGTAATTGTTTTTCC 1469 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || ||||| || ||||||||||| Sbjct 1470 GGTGAGGGTTTTCACAAAAATCTGCAT 1496 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || |||||||| || || | || | || ||||||||| || || ||||||||||| Sbjct 886 TCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTA 945 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||| | | |||| || || | | |||||| || | || ||| Sbjct 946 TCCTGAATCTTGGCCTTCACATTGTCAATTGTATCCGAGCTCTCCACCTCTAGTGTTACG 1005 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||| || || |||||||| Sbjct 1006 GTTTTCCCAGTGAGAGTTTTCACAAATATCTGCAT 1040 >seq31911 Length=2244 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| || || ||||| || |||||||| | | || | || || ||| Sbjct 1300 AAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAGCGAGGGTACGCCCATCTTCAAGC 1359 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || | | ||||||||| || ||||| ||||||||||| |||| Sbjct 1360 TGCTTACCAGCAAAGATCAATCTCTGCTGGTCTGGGGGGATCCCTTCCTTGTCTTGGATC 1419 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||| || | | ||| || |||| || | ||||| ||| Sbjct 1420 TTCGCCTTAACATTGTCTATCGTATCAGAGCTCTCGACCTCGAGAGTAATTGTTTTTCCG 1479 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||||||||| Sbjct 1480 GTGAGGGTTTTCACGAAAATCTGCAT 1505 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| || || ||||| || ||||| || ||| ||| ||| | || || || Sbjct 616 AAGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGACCA-TCTTCCAG 674 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||||| || | || | || ||||||||| || || || ||||||||||| || Sbjct 675 TTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGTAT 734 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | |||| || || | | |||||| || | || | |||||| || Sbjct 735 CTTGGCCTTCACATTGTCAATGGTATCCGAGCTCTCCACCTCTAATGTAATGGTTTTCCC 794 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| || || |||||||| Sbjct 795 AGTTAGAGTTTTCACAAATATCTGCAT 821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482080183480200