Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq34486 89.7 2e-12 >seq34486 Length=7597 Score = 89.7 bits (98), Expect = 2e-12 Identities = 125/174 (72%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||||| |||||| | || ||||| ||| || || ||| | || || ||| ||||| Sbjct 3909 CTTCGCCGAGCGTTTGGTTGCTTTCGCTTGCGTTGAGGGAATATTTTTCTCCGGAAGCTT 3968 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | || || || || ||||| ||||||||||| | ||| |||| | ||||| |||| Sbjct 3969 TTGC-TCAATTTTTTGGTTAAAAAAGCGTGGTTTATTGCCCGGTTTAACCTTCTCGAACG 4027 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 | |||| ||||||||||| | ||||| ||||| ||||| | ||||||| Sbjct 4028 AGTTGATTTCGAGGGACGAGGGTCTTCATTGTGACTTTGCCTGCTTACTCTACA 4081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1583821127620475