Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq33542 87.8 8e-13 >seq33542 Length=6995 Score = 87.8 bits (96), Expect = 8e-13 Identities = 132/181 (73%), Gaps = 9/181 (5%) Strand=Plus/Plus Query 65090 GTTCCAAACTGACCATTTGGCATTAATAA-ATTAATATTGTTTGAACCAATAAAATTCTG 65148 || ||||||||||||||||| | || || ||| |||||||| || | ||||| ||| Sbjct 2419 GTACCAAACTGACCATTTGGT-TGAAGAAGATTGATATTGTTACTGCCCACAAAATCCTG 2477 Query 65149 AGCCATTCCGATAAT--TGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATGT 65206 |||||| || || || ||||| | |||| ||||| ||||| || |||| || Sbjct 2478 AGCCATACCAATTATGGTGCTGGCG--AGACTCTGCTCACCATGATGGTAAGCTGAGTGC 2535 Query 65207 TCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAA--TTCTTTTTAA 65264 ||||||||||| ||| || ||||| |||||| |||| ||| ||| |||| || || Sbjct 2536 TCAGAGACATAACCAGAGAACTGAGCTACTTTTGCTTCC-TTGACAAAGTTTCTCTTGAA 2594 Query 65265 A 65265 | Sbjct 2595 A 2595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235042754790750