Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4370 188 8e-43 seq31910 179 4e-40 seq24190 179 4e-40 seq23310 176 5e-39 seq42083 170 2e-37 seq31911 167 3e-36 seq53181 159 4e-34 seq4542 111 2e-19 seq11950 95.1 1e-14 seq21658 82.4 9e-11 >seq4370 Length=4242 Score = 188 bits (208), Expect = 8e-43 Identities = 181/230 (79%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| || ||||| |||||||| ||| | ||||| ||| || | Sbjct 2534 ATGCAAATTTTTGTGAAGACCCTCACCGGTAAGACTATCACTTTGGAGGTGGAG--AGCT 2477 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| ||| ||||||| ||||| ||||| ||||| || ||||| ||||||| Sbjct 2476 CAGACACCATTGACAATGTGAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCAGACC 2417 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | |||||||| || |||||||| || |||| ||| ||||| || ||||| | Sbjct 2416 AGCAGAGGTTGATTTTTGCCGGAAAGCAACTGGAAGATGGTCGCACCCTGGCTGACTACA 2357 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| |||||||||||| | || | ||||| || |||||| Sbjct 2356 ACATCCAGAAGGAGTCCACTCTTCATTTGGTGCTTCGTCTCCGTGGTGGA 2307 Score = 176 bits (194), Expect = 5e-39 Identities = 178/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||||||||| || || ||||||||||||||| | ||||| ||| || Sbjct 2763 AATGCAAATATTTGTCAAGACTCTCACGGGCAAGACTATTACTTTGGAGGTGGAG--AGC 2706 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | |||| || ||||||| || || ||||| ||||| || ||||| |||||| Sbjct 2705 TCGGACACGATTGACAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCAGAC 2646 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | | |||||||| ||||||||||| || || | ||||||||| || || || Sbjct 2645 CAGCAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGACGGTCGTACCCTGGCCGATTAC 2586 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||||| ||||| | || | ||||| || ||||| Sbjct 2585 AACATCCAGAAGGAGTCCACACTTCACTTGGTGCTCCGTCTCCGTGGTGG 2536 Score = 161 bits (178), Expect = 1e-34 Identities = 160/205 (78%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || ||||| || ||| | ||||| ||| || | Sbjct 2990 ATGCAGATCTTCGTCAAGACTCTCACGGGGAAGACCATCACTTTGGAGGTGGAG--AGCT 2933 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | || |||| |||||||| ||||| |||||||||||||| ||||||| Sbjct 2932 CAGATACCATCGATAACGTGAAAGCTAAAATCCAGGATAAGGAGGGAATTCCACCAGACC 2873 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | | || ||||| || ||||| ||||| |||| || ||||| || ||||| | Sbjct 2872 AGCAAAGGTTGATCTTTGCAGGAAAGCAGCTCGAAGATGGGCGGACCCTTGCCGACTACA 2813 Query 27584 ATGTCCAAAAGGAATCCACTCTTCA 27608 | |||||||||||||||| ||||| Sbjct 2812 ACATCCAAAAGGAATCCACCCTTCA 2788 Score = 161 bits (178), Expect = 1e-34 Identities = 160/205 (78%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || ||||| ||||| |||||| | ||||| || || | Sbjct 3218 ATGCAGATCTTCGTCAAAACCCTCACCGGAAAGACAATTACTTTGGAGGTGGAA--AGCT 3161 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| ||| | ||||||||||| ||||||||||||||||| || ||||||| Sbjct 3160 CCGATACAATTGATAATGTTAAGGCTAAAATCCAGGACAAGGAGGGAATCCCACCAGACC 3101 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || || || |||||||| || || |||| || ||||| ||||| |||| Sbjct 3100 AGCAGAGGTTGATCTTCGCCGGTAAGCAGCTTGAAGATGGCCGCACCCTGGCAGATTATA 3041 Query 27584 ATGTCCAAAAGGAATCCACTCTTCA 27608 | |||| ||||||||||| || || Sbjct 3040 ACATCCAGAAGGAATCCACCCTGCA 3016 Score = 134 bits (148), Expect = 2e-26 Identities = 154/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || || ||||| || || |||||||| ||||| ||| || | Sbjct 3446 ATGCAAATATTCGTAAAAACCCTCACCGGAAAAACCATTACTCTCGAGGTCGAG--AGCT 3389 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | ||| | ||||| || || || || ||||| || ||||||||||| | Sbjct 3388 CGGATACCATCGATAATGTTAAGGCAAAGATCCAAGATAAGGAAGGTATTCCTCCAGATC 3329 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || || |||||||| ||||| || |||| || ||||| ||||| || | Sbjct 3328 AGCAGAGGTTGATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTCGCAGATTACA 3269 Query 27584 ATGTCCAAAAGGAATCCACTCTTCA 27608 | |||| ||||| ||||| || || Sbjct 3268 ACATCCAGAAGGAGTCCACCCTGCA 3244 >seq31910 Length=2189 Score = 179 bits (198), Expect = 4e-40 Identities = 179/230 (78%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || || || || || || || || | ||||| ||| || | Sbjct 584 ATGCAAATTTTTGTTAAAACACTCACTGGGAAAACCATAACATTGGAGGTGGAG--AGCT 527 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| ||| |||| ||||| || ||||| ||||| || ||||| ||||||| Sbjct 526 CGGATACCATTGATAATGTGAAAGCTAAGATCCAGGATAAGGAAGGCATTCCCCCAGACC 467 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || |||||||| |||||||| || |||| ||| ||||| |||||||| | Sbjct 466 AGCAGAGGTTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGGCAGACTACA 407 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || |||| ||||||||||| ||||| || ||| | ||||| || |||||| Sbjct 406 ATATCCAGAAGGAATCCACCCTTCACCTTGTCCTTCGTCTCCGTGGTGGA 357 Score = 158 bits (174), Expect = 1e-33 Identities = 175/232 (75%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 27402 TATA-ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGT 27460 |||| ||||| || ||||| || || || ||||| || || |||||||| ||||| ||| Sbjct 1501 TATAGATGCAGATTTTTGTGAAAACCCTCACCGGAAAAACAATTACTCTCGAGGTCGAGA 1442 Query 27461 CAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAG 27520 ||||| || | ||| | ||||| || || || |||||||| || ||||| |||| Sbjct 1441 GCTCTGATACGATAGACAATGTTAAGGCGAAGATCCAAGACAAGGAAGGGATTCCCCCAG 1382 Query 27521 ACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 |||||||| | | || |||||||||||||| || || |||| |||||||| || || | Sbjct 1381 ACCAGCAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAAGATGGCCGTACCCTCGCTGATT 1322 Query 27581 ATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||| |||||||| || ||||| | || | |||||||| ||||| Sbjct 1321 ACAACATCCAGAAGGAATCAACCCTTCACTTGGTGCTTCGTCTTCGTGGTGG 1270 Score = 149 bits (164), Expect = 7e-31 Identities = 157/205 (77%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || || ||||| ||||| || || | ||||| ||| || | Sbjct 1268 ATGCAAATTTTCGTGAAAACCCTCACCGGGAAGACCATAACATTGGAGGTGGAG--AGCT 1211 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| ||| ||||||| || |||||||||||||| || ||||| ||||||| Sbjct 1210 CGGATACCATTGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGTATTCCCCCAGACC 1151 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || |||||||| ||||| || || |||| || || || |||||||| | Sbjct 1150 AGCAGAGGTTGATCTTTGCTGGAAAGCAGCTTGAAGATGGACGGACTCTTGCAGACTACA 1091 Query 27584 ATGTCCAAAAGGAATCCACTCTTCA 27608 | | || |||||||| || ||||| Sbjct 1090 ACATTCAGAAGGAATCAACCCTTCA 1066 Score = 141 bits (156), Expect = 1e-28 Identities = 156/206 (76%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| || || || || || || || | || || ||||| ||| || Sbjct 1041 AATGCAGATATTTGTGAAAACTCTCACTGGGAAAACCGTAACACTAGAGGTGGAG--AGC 984 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| |||| ||| ||||||| || |||||||| ||||| || ||||| |||||| Sbjct 983 TCGGATACAATTGACAATGTGAAGGCCAAGATTCAGGATAAGGAAGGCATTCCCCCAGAC 924 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | | || |||||||| ||||| || || |||| || ||||| |||||||| Sbjct 923 CAGCAGAGGTTGATCTTTGCTGGAAAGCAGCTTGAAGATGGACGGACCCTTGCAGACTAC 864 Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608 || | || |||||||| |||||||| Sbjct 863 AACATTCAGAAGGAATCAACTCTTCA 838 >seq24190 Length=3131 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || || ||||| |||||||| |||||||| || Sbjct 1254 ATGCAGATCTTCGTCAAAACCCTAACGGGTAAGACAATTACTCTGGAGGTTGAATCCTCC 1313 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||||||||||| || |||||||| |||||||| ||||| ||| Sbjct 1314 GACACCATTGACAATGTCAAGGCTAAAATCCAAGACAAGGAAGGAATTCCACCAGATCAG 1373 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||||| | |||||||| || || || Sbjct 1374 CAGCGGCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCAGGACCCTAGCGGATTACAAC 1433 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || ||||| || | ||||| |||||||| Sbjct 1434 ATCCAGAAGGAGTCAACCCTGCATCTGGTTCTCCGTCTGCGCGGTGG 1480 >seq23310 Length=1212 Score = 176 bits (194), Expect = 5e-39 Identities = 178/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||||||||| ||||| | ||||| ||||| || ||||||||||| || || Sbjct 1163 AATGCAAATCTTTGTTAAGACCTTAACCGGGAAGACCATCACTCTTGAGGTGGA--AAGT 1106 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||||| ||| | ||| | || ||||| |||||||| || || || ||||| Sbjct 1105 TCAGACACCATTGACAATGTCAAGACAAAGATTCAAGACAAGGAAGGTATCCCACCAGAT 1046 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | | ||||| |||||||| ||||| ||||| | ||||||||| || ||||| Sbjct 1045 CAGCAGAGGTTGATTTTCGCTGGTAAACAACTGGAGGACGGTCGTACCCTTGCTGACTAC 986 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| |||| || ||||| ||||||||| |||| |||| || | ||||| Sbjct 985 AATATCCAGAAAGAATCAACTCTTCATTTAGTGCTGCGGCTGAGGGGTGG 936 Score = 156 bits (172), Expect = 5e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | || || ||||| |||||| | || || ||| || | Sbjct 706 ATGCAGATATTCGTGAAGACATTGACTGGGAAGACCATTACTTTGGAAGTGGAG--AGCT 649 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| ||| | ||||| || |||||||||||||| || ||||||||||| | Sbjct 648 CAGACACTATTGACAATGTTAAGGCCAAGATTCAGGACAAGGAAGGCATTCCTCCAGATC 589 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| ||||| ||||| || || ||||| |||| || ||||| || ||||||| Sbjct 588 AGCAGCGTCTGATTTTCGCTGGCAAACAGCTCGACGATGGACGAACCCTTGCTGACTATA 529 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||||| || ||||| || || || || | || || | ||||| Sbjct 528 ATATCCAAAAAGAGTCCACCCTCCACCTTGTTCTTCGCCTGAGAGGTGG 480 Score = 150 bits (166), Expect = 2e-31 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | || || ||||| || ||| | || || ||| || | Sbjct 934 ATGCAGATATTCGTGAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTGGAG--AGCT 877 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| ||| | ||| | || |||||||||||||| || ||||||||||| | Sbjct 876 CAGACACCATTGATAATGTCAAGACCAAGATTCAGGACAAGGAAGGCATTCCTCCAGATC 817 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| || | ||||||||||| ||||| || ||||||| | ||||| || ||||| | Sbjct 816 AGCAACGCTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGGAGGACCCTTGCTGACTACA 757 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| |||||||| ||||||||| | || |||| || | ||||| Sbjct 756 ATATCCAGAAGGAATCGACTCTTCATTTGGTGCTGCGACTGAGGGGTGG 708 >seq42083 Length=68989 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || ||||| ||||| |||||| | ||||||||||| Sbjct 15360 ATGCAGATCTTCGTGAAAACCCTAACCGGTAAGACCATTACTTTGGAGGTTGAGTCCTCC 15301 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | |||||||| || ||||| |||||||| || || ||||| ||| Sbjct 15300 GATACCATTGACAATGTCAAGGCTAAGATACAGGATAAGGAGGGCATCCCGCCAGATCAG 15241 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | | |||||||| || ||||| Sbjct 15240 CAGCGGCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCAGGACCCTAGCTGATTATAAC 15181 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || | ||||| || ||||| | |||||||| Sbjct 15180 ATCCAGAAGGAGTCAACCTTGCATCTGGTGTTGCGCTTGCGCGGTGG 15134 >seq31911 Length=2244 Score = 167 bits (184), Expect = 3e-36 Identities = 176/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || || || || ||||| || || | ||||| ||| || | Sbjct 593 ATGCAAATTTTTGTTAAAACTCTCACTGGGAAGACCATAACATTGGAGGTGGAG--AGCT 536 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| ||| | ||| |||| || |||||||||||||||||||| || |||| Sbjct 535 CGGATACCATTGATAATGTAAAGACTAAGATACAGGACAAGGAGGGAATTCCCCCTGACC 476 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || ||||| ||||||||| | ||||||| | || || || ||||| | Sbjct 475 AGCAGAGGTTGATATTTGCCGGTAAGCAATTGGAGGATGGCAGGACACTGGCTGACTACA 416 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||||||||| ||||| || ||| | ||||| || |||||| Sbjct 415 ACATCCAGAAGGAATCCACCCTTCACCTTGTCCTTCGTCTCCGTGGTGGA 366 Score = 167 bits (184), Expect = 3e-36 Identities = 176/230 (77%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| || || || || || || || ||||| | ||||| ||| || Sbjct 822 AATGCAGATATTTGTGAAAACTCTAACTGGGAAAACCATTACATTAGAGGTGGAG--AGC 765 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| ||||| ||| ||||||| || || ||||||||||| || ||||| |||||| Sbjct 764 TCGGATACCATTGACAATGTGAAGGCCAAGATACAGGACAAGGAAGGTATTCCCCCAGAC 705 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | | || |||||||| |||||||| || |||| ||| ||||| |||||||| Sbjct 704 CAGCAGAGGTTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGGCAGACTAC 645 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| |||||||| || ||||| | || | ||||| || ||||| Sbjct 644 AACATCCAGAAGGAATCAACCCTTCACTTGGTGCTTCGTCTCCGTGGTGG 595 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || || || || ||||| || || |||||||| ||||| ||| | Sbjct 1505 ATGCAGATTTTCGTGAAAACCCTCACCGGAAAAACAATTACTCTCGAGGTCGAGAGCTCT 1446 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| | ||||| || || || |||||||| || || || ||||||||| Sbjct 1445 GATACGATAGACAATGTTAAGGCGAAGATCCAAGACAAGGAAGGGATCCCCCCAGACCAG 1386 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || |||||||||||||| || || |||| |||||||| || || || || Sbjct 1385 CAGAGATTGATCTTTGCTGGTAAGCAGCTTGAAGATGGGCGTACCCTCGCTGATTACAAC 1326 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || ||||| | || | |||||||| ||||| Sbjct 1325 ATCCAGAAGGAATCAACCCTTCACTTGGTGCTTCGTCTTCGTGGTGG 1279 Score = 138 bits (152), Expect = 1e-27 Identities = 159/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || || ||||| ||||| || || | ||||| ||| || | Sbjct 1277 ATGCAAATTTTCGTGAAAACCCTCACCGGGAAGACCATAACATTGGAGGTGGAG--AGCT 1220 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| ||| | ||||| || || ||||| ||||| || ||||| ||||||| Sbjct 1219 CGGATACCATTGACAATGTTAAGGCCAAGATACAGGATAAGGAAGGTATTCCCCCAGACC 1160 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | | || |||||||| ||||| || || |||| || ||||| |||||||| | Sbjct 1159 AGCAGAGATTGATCTTTGCTGGAAAGCAGCTTGAAGATGGACGGACCCTTGCAGACTACA 1100 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 | | || || ||||| || |||||| | ||| Sbjct 1099 ACATTCAGAAAGAATCAACCCTTCATTTGGTC 1068 Score = 136 bits (150), Expect = 4e-27 Identities = 159/213 (75%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| || || || ||||| || || || || || ||||| ||| || Sbjct 1050 AATGCAGATATTTGTGAAAACTCTCACCGGAAAAACCATAACACTAGAGGTGGAG--AGC 993 Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | |||| ||||| ||| | ||||| || || ||||| ||||| || ||||| ||||| Sbjct 992 TCGGATACCATTGACAATGTAAAGGCCAAGATACAGGATAAGGAAGGTATTCCCTCAGAC 933 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||| | | || |||||||| ||||| || || |||| || ||||| |||||||| Sbjct 932 CAGCAGAGGTTGATCTTTGCTGGAAAGCAGCTTGAAGATGGACGGACCCTTGCAGACTAC 873 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 || | || || ||||| || |||||| | ||| Sbjct 872 AACATTCAGAAAGAATCAACCCTTCATTTGGTC 840 >seq53181 Length=15488 Score = 159 bits (176), Expect = 4e-34 Identities = 174/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| | || || ||||| ||||| ||||| || ||| || | Sbjct 5519 ATGCAGATTTTTGTGAAGACATTGACTGGGAAGACCATTACACTTGAAGTAGAG--AGCT 5462 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| ||||| | || ||||||||||||||||| ||||| || || | Sbjct 5461 CAGACACCATAGATAATGTGAAGTCCAAGATTCAGGACAAGGAGGGGATTCCCCCGGATC 5402 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || ||||||||||| |||||||| ||||||| || ||||| || || || | Sbjct 5401 AGCAGAGGCTCATTTTTGCTGGGAAGCAACTAGAGGATGGGCGCACCCTTGCTGATTACA 5342 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | || ||||| ||||| || || || ||| | |||||| | ||||| Sbjct 5341 ACATTCAGAAGGAGTCCACACTCCACCTTGTCCTCCGTCTTAGAGGTGG 5293 Score = 156 bits (172), Expect = 5e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || ||||| ||||| |||||||| || || ||| || | Sbjct 6659 ATGCAGATCTTTGTCAAAACCCTAACCGGTAAGACAATTACTCTCGAAGTCGAG--AGTT 6602 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | ||| | ||| |||| || || |||||||| || || ||||| || | Sbjct 6601 CCGATACCATCGATAATGTCAAGACTAAGATCCAAGACAAGGAAGGCATCCCTCCGGATC 6542 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || ||||| ||||| || || ||||| | ||||| || || || |||| Sbjct 6541 AGCAGCGTCTCATATTTGCCGGTAAACAGCTTGAGGACGGCCGTACACTTGCCGATTATA 6482 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || ||||| ||||| || ||||| || | || || || || || Sbjct 6481 ATATTCAGAAGGAGTCCACCCTCCATCTTGTTCTCCGACTCCGTGGCGG 6433 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || || || || ||||| ||||||||||||||||| | Sbjct 5747 ATGCAAATATTTGTTAAAACTCTCACAGGTAAGACGATTACTCTTGAGGTTGAAAGTTCT 5688 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | || | ||||| |||||||| || ||||| || ||||| || ||||| Sbjct 5687 GATACCATCGATAACGTCAAGGCAAAAATTCAAGATAAGGAAGGGATTCCCCCGGACCAA 5628 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || ||||||||||| || ||| | ||||| | || || | || || ||||| Sbjct 5627 CAGAGACTTATTTTTGCTGGAAAACAATTGGAGGACGGACGAACATTGGCCGATTATAAC 5568 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| ||||| ||||| || || ||||||| | ||||| Sbjct 5567 ATACAAAAGGAGTCCACCCTTCACCTGGTGCTGCGTCTCAGAGGTGG 5521 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| |||||||| || || || || ||||||||||| | || || ||| | Sbjct 5975 ATGCAAATATTTGTCAAAACTCTCACAGGTAAGACTATTACCTTGGAAGTCGAGAGTTCT 5916 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || | |||||||| |||||||||||||| || || ||||| || ||| Sbjct 5915 GATACAATCGACAACGTTAAGGCTAAGATTCAGGACAAGGAAGGGATCCCTCCTGATCAG 5856 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| | || || | | ||| | || || |||||| Sbjct 5855 CAGCGCCTGATCTTTGCCGGGAAGCAGTTGGAAGACGGGAGAACCTTGGCCGATTATAAT 5796 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || | ||||| |||||| | ||||||||||| Sbjct 5795 ATCCAGAAGGAGTCTACCTTACATCTCGTCTTGAGGCTTCGCGGTGG 5749 Score = 147 bits (162), Expect = 2e-30 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || ||||| ||||| || ||||| ||||| ||| || | Sbjct 6431 ATGCAGATCTTCGTTAAAACCCTAACCGGTAAGACGATCACTCTCGAGGTCGAG--AGTT 6374 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||| | || | ||||| || |||||||||||||||||||||||||| || | Sbjct 6373 CAGATACCATCGACAACGTTAAGGCGAAGATTCAGGACAAGGAGGGAATTCCTCCTGATC 6314 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || || || ||||||||| | || || | | || | || || || | Sbjct 6313 AGCAGAGACTTATCTTCGCCGGTAAGCAATTGGAAGACGGCAGAACGTTGGCCGATTACA 6254 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || ||||| || || |||||||| || ||| | || |||||||| Sbjct 6253 ATATTCAGAAGGAGTCTACCCTTCATCTTGTTTTGAGGCTCCGCGGTGG 6205 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| |||||||| || || ||||| ||||| || || | || || || | Sbjct 6203 ATGCAAATATTTGTCAAAACCCTCACCGGTAAGACGATCACCTTGGAAGTCGAAAGTTCT 6144 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || | |||||||| |||||||| ||||| ||||||||||| || ||| Sbjct 6143 GATACTATCGACAACGTTAAGGCTAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 6084 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || |||||||| | || || | | || | || ||||| || Sbjct 6083 CAGCGCTTGATCTTCGCCGGTAAGCAGTTGGAAGACGGCAGAACTTTGGCCGACTACAAC 6024 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || |||||||| || ||| | || |||||||| Sbjct 6023 ATTCAGAAGGAGTCTACCCTTCATCTTGTTTTGAGGCTCCGCGGTGG 5977 >seq4542 Length=2509 Score = 111 bits (122), Expect = 2e-19 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 27495 TCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACT 27554 ||||||||| || || |||||||| || |||||| | || |||||||||||||||||| | Sbjct 2256 TCAGGACAAAGAAGGTATTCCTCCTGATCAGCAGAGACTTATTTTTGCTGGTAAGCAATT 2197 Query 27555 CGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 || |||| ||||| |||| |||||||| |||| || ||||| || ||||| | || Sbjct 2196 GGAAGATGGCCGTACTTTAGCTGACTATAACATCCAGAAAGAATCAACCCTTCACTTGGT 2137 Query 27615 CTTGCGTCTTCGCGGTGGA 27633 ||| | ||| | || ||| Sbjct 2136 TTTGAGGCTTAGAGGAGGA 2118 >seq11950 Length=1380 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||| ||||| || ||||||||||| ||| | Sbjct 142 ATGCAGATCTTTGTTAAGACCTTAACCGGTAAGACCATCACTCTTGAGGTGGAGAGTTCT 83 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||||| |||||||| |||||||| || || | |||| ||| Sbjct 82 GATACCATCGATAATGTCAAGGCAAAAATTCAAGACAAGGAAGGTATCCAGGCAGATCAG 23 Query 27526 CAGCGTCTAATTTTTGCTGG 27545 ||| | | ||||| || || Sbjct 22 CAGAGGTTGATTTTCGCAGG 3 >seq21658 Length=30823 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || || || || ||||| ||||| || || || |||||||||||| Sbjct 22361 AATGCAGATCTTCGTTAAAACCCTAACCGGAAAGACCATAACCCTAGAGGTTGAGTCATC 22302 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 ||||| |||| ||| | ||| |||| ||||| ||||| || || Sbjct 22301 TGATACTATTGATAATGTCAAGACTAAGATTCAAGACAAAGAAGG 22257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568728822327600