Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Asclepias_20syriaca_20[genbank_20GCA_5F002018285.1_202017-03-03] 221,855 sequences; 236,770,010 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq53181 89.7 4e-13 >seq53181 Length=15488 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 111183 AAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAA 111242 ||||||| || || ||||| ||||| || ||||| || ||||||| ||| || || Sbjct 5664 AAAAATTCAAGATAAGGAAGGGATTCCCCCGGACCAACAGAGACTTATTTTTGCTGGAAA 5605 Query 111243 ACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACA 111302 ||||||||| || ||| ||||||||||||| |||||||| || || || || || Sbjct 5604 ACAATTGGAGGACGGACGAACATTGGCCGATTATAACATACAAAAGGAGTCCACCCTTCA 5545 Query 111303 TTTAGTGTTGCGTCTGCGCGGTGG 111326 | ||| ||||||| | ||||| Sbjct 5544 CCTGGTGCTGCGTCTCAGAGGTGG 5521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420670682491480