Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq19350 105 1e-17 seq25300 104 5e-17 seq23040 104 5e-17 seq22724 104 5e-17 seq20935 104 5e-17 seq20749 104 5e-17 seq4655 104 5e-17 seq3662 104 5e-17 seq3307 98.7 2e-15 seq20901 86.0 1e-11 >seq19350 Length=1202040 Score = 105 bits (116), Expect = 1e-17 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||||||||||||||||||||||||| || || |||| || ||||||||||||||||| Sbjct 644573 TGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 644514 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 644513 CCCCACGGTGGGC 644501 >seq25300 Length=5305897 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 734061 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 734120 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 734121 CCCACGGTGGGC 734132 >seq23040 Length=7163423 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 4550445 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4550386 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4550385 CCCACGGTGGGC 4550374 >seq22724 Length=404016 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 22705 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 22764 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 22765 CCCACGGTGGGC 22776 >seq20935 Length=1615929 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 520627 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 520568 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 520567 CCCACGGTGGGC 520556 >seq20749 Length=2021024 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 1639317 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1639258 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1639257 CCCACGGTGGGC 1639246 >seq4655 Length=957841 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 755430 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 755371 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 755370 CCCACGGTGGGC 755359 >seq3662 Length=1964220 Score = 104 bits (114), Expect = 5e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||||| || || |||| || |||||||||||||||||| Sbjct 791667 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 791608 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 791607 CCCACGGTGGGC 791596 >seq3307 Length=987958 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 |||||||||||||||||||| |||||| || || |||| || |||||||||||||||||| Sbjct 657448 GCCCGTCTAGCTCAGTCGGTTGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 657389 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 657388 CCCACGGTGGGC 657377 >seq20901 Length=225483 Score = 86.0 bits (94), Expect = 1e-11 Identities = 155/224 (69%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGC-ATGAACGCTGAACTTATGG 230473 ||||||| | || ||||| | || || ||| || ||| ||||||| | | ||| Sbjct 70532 GGAGTTCGTGTGCGACGCGCTGCCGTG-CGCATTGGTGGGGATGAACGGGGCGTTGATGA 70474 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 | |||||||| || || || || || | | || | ||| || || | || ||| |||| Sbjct 70473 GTCAGTACATAGAGTTTGTGGCAGATAGGTTGTTGGGTGCGCTGGGGTGCGGGAAGGTGT 70414 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 || | ||| || |||| | |||||| | |||||||||||||||||||| || | Sbjct 70413 ACGGTGTGACGAATCCGTTTGATTGGATGGAGTTGATTTCGCTTCAAGGGAAGACGAATT 70354 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||| || ||| | ||| | || || || | | || ||||||| Sbjct 70353 TCTTTGAGAAGAGAGTCGGGGAATACCAAAAGGCTTCTGTGATG 70310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057477033728000