Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq18882 167 2e-36
seq20901 131 2e-25
>seq18882
Length=869960
Score = 167 bits (184), Expect = 2e-36
Identities = 573/880 (65%), Gaps = 15/880 (2%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||| || || | ||| || ||||| || || ||||| || || | || || || ||
Sbjct 813933 TTTGATATTCCCCAACTCGCTTTTCAAAGAAATTAGTCTTCCCTTGGAGCGAGATTAGCT 813992
Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
|||| ||||||||||||| | | | | || |||||| || | | | |
Sbjct 813993 CCATCCAATCAAAAGGATTCGCCACACCGTACAGCTTCCCGTACCCAAGCGCACCCAACA 814052
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
| |||||||| ||||| ||||| || || | ||| ||||| | ||||| || | | ||
Sbjct 814053 ACCTATCCGCGACAAACTCTATGTACTGACTCATCAATTCTCCATTCATCCCCACCA-AC 814111
Query 16854 GTAC-CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAA-TAAT 16911
| | ||| || || || || ||| | |||||| | ||||| ||||| | |||
Sbjct 814112 GCGCACGGCAGCGCATCGCACACAAACTCTCTCTCTATCTCCACCGCCTCCTTCACTAAC 814171
Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTA-TGTTTAAGATGTTTAAACATCAGACATGCGA 16970
| || | || |||||| | | | | || | | | ||| ||| || || |
Sbjct 814172 GCCTTCA-CGCGCTCCTCGCTTAGCTTCGTCCTCAATAAACT-ATACAACAGGCACGCAA 814229
Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030
||||||| || | ||||| |||| ||| | ||||| || ||||| || || ||||
Sbjct 814230 AATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTGAGAATGTTAATCCCGGCA 814289
Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090
| ||||| || || | ||||||||||||| || ||| || ||||| || ||||
Sbjct 814290 TTAACCCTCGCTTTTTGAGCCAAAATATCGCGCAAAAACTCCCTGAGAAGAAAATCCCCT 814349
Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150
| ||| | |||||||||||||||| |||||| | ||| | || || ||||| |
Sbjct 814350 CCACGCAAGCAAACGCGATTAATCTCTCGGCGAAAGTCTCCGAGCCGT--CG-ATCCAAT 814406
Query 17151 TCTGCACCCACTCGGCTT--TTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208
| | ||||| ||||| ||||| | ||| | |||||| ||||| | ||| |
Sbjct 814407 TTAACGCCCACGTGGCTTTCTTTGC--GACGCAGGGAACCGTTTCGATGGCGTGAAAGAG 814464
Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268
| ||||| | || | || || || || | || || ||||||||||||
Sbjct 814465 ACGATTCTTTTCGTCGGAGTTTTTGATGTAAGTTTCTAGAAGCAGCGAGTACATTTCGGA 814524
Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328
||| |||||||| ||||| || || || ||||| ||| || || || || | || ||
Sbjct 814525 GTGGATGTTCTCAATGGCGATTTGGAAGCCGTAGAAGGCACGCGCCTCGGCGACCTGGAC 814584
Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388
||| ||| | | || || || ||| |||||||||||| |||||||| ||
Sbjct 814585 CTCCGTCATGAACCTGCCGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCGGCGAAGAA 814644
Query 17389 CGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAA 17448
|| | | ||| | | ||| | || ||||| | || || | ||||| |
Sbjct 814645 GGCGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAGGGCCTCCCAGTGGCGGAG 814704
Query 17449 ATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACAT 17508
||||| || | ||| ||||| || | ||||||||| || | || || || |||||
Sbjct 814705 ATCTTGCGAAAGATCAACTTCCTCAGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACAT 814764
Query 17509 ATTCCAAATATCATTGTATTGTATGGGGA--ATACAACAT 17546
| |||||| | ||| || || |||| |||||| ||
Sbjct 814765 TTCCCAAATTTGTGGGTACTGAATCGGGAACATACAAAAT 814804
>seq20901
Length=225483
Score = 131 bits (144), Expect = 2e-25
Identities = 312/467 (67%), Gaps = 5/467 (1%)
Strand=Plus/Plus
Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015
||| || || ||||||||||| || | ||| ||||||| ||| || ||||| || |
Sbjct 70606 ACAACAAGCACGCGAAATCGCAGTGGAGTCCTTCGTCTCGCGAGATTAGCTCGTTTGAGA 70665
Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075
| || | ||| ||||| || || || |||||||||||||||||| ||| || |
Sbjct 70666 AGGTTAGCCCCGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCGCAGAAACTGCCCG 70725
Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135
| || ||||| || || ||| | |||||||| || | || || ||| | ||| |
Sbjct 70726 AGAAAAATATCCCTTCCACGCAAGCAAACGCTATCAGTCTCTCCGCGAATGTCTCCGAGC 70785
Query 17136 TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTA 17195
|| || ||||| || | |||| ||||| ||| | ||| || |||||| |
Sbjct 70786 CGT--CG-ATCCAATTTAGGGCCCAATCGGCCTTTCTGGCAACGCACGGCACCGTTTCAA 70842
Query 17196 TGGCCTTAAATAA-TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254
||| |||||| ||||||| | || || |||| ||||| || | || ||
Sbjct 70843 AGGCGCGAAATAAGCGGCTCTTTTCGTCGGAGTTC-TTTATGTACGTTTCTAGAAGGAGC 70901
Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314
||||||||||||||| |||||||| ||||| || || || ||||| ||| || ||
Sbjct 70902 GAGTACATTTCGGAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAGAAGGCACGCGCC 70961
Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374
|| | | ||| ||||| ||| | | || || |||||| ||||| || ||
Sbjct 70962 TCGGAGACTTGGACTTCTTTCATGAACCTGGCAGCGAGGTTTTCGAGGACGATTCCATCC 71021
Query 17375 CTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC 17421
|||||||| || || | | || | ||||| | ||| |||||
Sbjct 71022 GAGGCGGCGAAGAAGGCGAGCACGTGAGTGATGAAGTGTTTCTCGTC 71068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517379985408000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |