Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq18882 167 2e-36 seq20901 131 2e-25 >seq18882 Length=869960 Score = 167 bits (184), Expect = 2e-36 Identities = 573/880 (65%), Gaps = 15/880 (2%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||| || || | ||| || ||||| || || ||||| || || | || || || || Sbjct 813933 TTTGATATTCCCCAACTCGCTTTTCAAAGAAATTAGTCTTCCCTTGGAGCGAGATTAGCT 813992 Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 |||| ||||||||||||| | | | | || |||||| || | | | | Sbjct 813993 CCATCCAATCAAAAGGATTCGCCACACCGTACAGCTTCCCGTACCCAAGCGCACCCAACA 814052 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | |||||||| ||||| ||||| || || | ||| ||||| | ||||| || | | || Sbjct 814053 ACCTATCCGCGACAAACTCTATGTACTGACTCATCAATTCTCCATTCATCCCCACCA-AC 814111 Query 16854 GTAC-CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAA-TAAT 16911 | | ||| || || || || ||| | |||||| | ||||| ||||| | ||| Sbjct 814112 GCGCACGGCAGCGCATCGCACACAAACTCTCTCTCTATCTCCACCGCCTCCTTCACTAAC 814171 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTA-TGTTTAAGATGTTTAAACATCAGACATGCGA 16970 | || | || |||||| | | | | || | | | ||| ||| || || | Sbjct 814172 GCCTTCA-CGCGCTCCTCGCTTAGCTTCGTCCTCAATAAACT-ATACAACAGGCACGCAA 814229 Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030 ||||||| || | ||||| |||| ||| | ||||| || ||||| || || |||| Sbjct 814230 AATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTGAGAATGTTAATCCCGGCA 814289 Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090 | ||||| || || | ||||||||||||| || ||| || ||||| || |||| Sbjct 814290 TTAACCCTCGCTTTTTGAGCCAAAATATCGCGCAAAAACTCCCTGAGAAGAAAATCCCCT 814349 Query 17091 CGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATT 17150 | ||| | |||||||||||||||| |||||| | ||| | || || ||||| | Sbjct 814350 CCACGCAAGCAAACGCGATTAATCTCTCGGCGAAAGTCTCCGAGCCGT--CG-ATCCAAT 814406 Query 17151 TCTGCACCCACTCGGCTT--TTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA 17208 | | ||||| ||||| ||||| | ||| | |||||| ||||| | ||| | Sbjct 814407 TTAACGCCCACGTGGCTTTCTTTGC--GACGCAGGGAACCGTTTCGATGGCGTGAAAGAG 814464 Query 17209 TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGA 17268 | ||||| | || | || || || || | || || |||||||||||| Sbjct 814465 ACGATTCTTTTCGTCGGAGTTTTTGATGTAAGTTTCTAGAAGCAGCGAGTACATTTCGGA 814524 Query 17269 GTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAAC 17328 ||| |||||||| ||||| || || || ||||| ||| || || || || | || || Sbjct 814525 GTGGATGTTCTCAATGGCGATTTGGAAGCCGTAGAAGGCACGCGCCTCGGCGACCTGGAC 814584 Query 17329 TTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAA 17388 ||| ||| | | || || || ||| |||||||||||| |||||||| || Sbjct 814585 CTCCGTCATGAACCTGCCGGCGAGGTTCTCGAGGACGATGCCGTCGGAGGCGGCGAAGAA 814644 Query 17389 CGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAA 17448 || | | ||| | | ||| | || ||||| | || || | ||||| | Sbjct 814645 GGCGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAGGGCCTCCCAGTGGCGGAG 814704 Query 17449 ATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACAT 17508 ||||| || | ||| ||||| || | ||||||||| || | || || || ||||| Sbjct 814705 ATCTTGCGAAAGATCAACTTCCTCAGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACAT 814764 Query 17509 ATTCCAAATATCATTGTATTGTATGGGGA--ATACAACAT 17546 | |||||| | ||| || || |||| |||||| || Sbjct 814765 TTCCCAAATTTGTGGGTACTGAATCGGGAACATACAAAAT 814804 >seq20901 Length=225483 Score = 131 bits (144), Expect = 2e-25 Identities = 312/467 (67%), Gaps = 5/467 (1%) Strand=Plus/Plus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| || || ||||||||||| || | ||| ||||||| ||| || ||||| || | Sbjct 70606 ACAACAAGCACGCGAAATCGCAGTGGAGTCCTTCGTCTCGCGAGATTAGCTCGTTTGAGA 70665 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | || | ||| ||||| || || || |||||||||||||||||| ||| || | Sbjct 70666 AGGTTAGCCCCGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCGCAGAAACTGCCCG 70725 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | || ||||| || || ||| | |||||||| || | || || ||| | ||| | Sbjct 70726 AGAAAAATATCCCTTCCACGCAAGCAAACGCTATCAGTCTCTCCGCGAATGTCTCCGAGC 70785 Query 17136 TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTA 17195 || || ||||| || | |||| ||||| ||| | ||| || |||||| | Sbjct 70786 CGT--CG-ATCCAATTTAGGGCCCAATCGGCCTTTCTGGCAACGCACGGCACCGTTTCAA 70842 Query 17196 TGGCCTTAAATAA-TTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254 ||| |||||| ||||||| | || || |||| ||||| || | || || Sbjct 70843 AGGCGCGAAATAAGCGGCTCTTTTCGTCGGAGTTC-TTTATGTACGTTTCTAGAAGGAGC 70901 Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314 ||||||||||||||| |||||||| ||||| || || || ||||| ||| || || Sbjct 70902 GAGTACATTTCGGAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAGAAGGCACGCGCC 70961 Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374 || | | ||| ||||| ||| | | || || |||||| ||||| || || Sbjct 70962 TCGGAGACTTGGACTTCTTTCATGAACCTGGCAGCGAGGTTTTCGAGGACGATTCCATCC 71021 Query 17375 CTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC 17421 |||||||| || || | | || | ||||| | ||| ||||| Sbjct 71022 GAGGCGGCGAAGAAGGCGAGCACGTGAGTGATGAAGTGTTTCTCGTC 71068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517379985408000