Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq20901 113 5e-20 >seq20901 Length=225483 Score = 113 bits (124), Expect = 5e-20 Identities = 253/373 (68%), Gaps = 13/373 (3%) Strand=Plus/Plus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 |||||||| ||||| || ||||||||||||| ||| || ||||| || || |||| | Sbjct 70614 CACGCGAAATCGCAGTGGAGTCCTTCGTCTCGCGAGATTAGCTCGTTTGAGAAGGTTAGC 70673 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATAT--CGCAGCAAATGACCCCGAAAAGA 16319 || |||||| || || || |||||||| ||||| ||||| || || ||||| || | Sbjct 70674 CCCGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCGCAGAAACTG--CCCGAGAAAA 70731 Query 16320 ATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGC--ATCTTTATT 16377 |||| || || || | ||||| || || | || |||||| | || | | | | Sbjct 70732 ATATCCCTTCCACGCAAGCAAACGCTATCAGTCTCTCCGCGAATGTCTCCGAGCCGT--- 70788 Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437 || ||||| || | |||| ||||| ||| | || || |||||| | ||| Sbjct 70789 -CG-ATCCAATTTAGGGCCCAATCGGCCTTTCTGGCAACGCACGGCACCGTTTCAAAGGC 70846 Query 16438 CTTAAACAA-TTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGT 16496 ||| || ||||||| | | || |||| ||||| || | || | || Sbjct 70847 GCGAAATAAGCGGCTCTTTTCGTCGGAGTTC-TTTATGTACGTTTCTAGAAGGAGCGAGT 70905 Query 16497 ACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCG 16556 ||||||| ||||| |||||||| ||||| || || || || |||||| || ||||| | Sbjct 70906 ACATTTCGGAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAGAAGGCACGCGCCTCGG 70965 Query 16557 CTATTTGTACTTC 16569 | ||| ||||| Sbjct 70966 AGACTTGGACTTC 70978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511250747392000