Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq20901 113 5e-20
>seq20901
Length=225483
Score = 113 bits (124), Expect = 5e-20
Identities = 253/373 (68%), Gaps = 13/373 (3%)
Strand=Plus/Plus
Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261
|||||||| ||||| || ||||||||||||| ||| || ||||| || || |||| |
Sbjct 70614 CACGCGAAATCGCAGTGGAGTCCTTCGTCTCGCGAGATTAGCTCGTTTGAGAAGGTTAGC 70673
Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATAT--CGCAGCAAATGACCCCGAAAAGA 16319
|| |||||| || || || |||||||| ||||| ||||| || || ||||| || |
Sbjct 70674 CCCGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCGCAGAAACTG--CCCGAGAAAA 70731
Query 16320 ATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGC--ATCTTTATT 16377
|||| || || || | ||||| || || | || |||||| | || | | | |
Sbjct 70732 ATATCCCTTCCACGCAAGCAAACGCTATCAGTCTCTCCGCGAATGTCTCCGAGCCGT--- 70788
Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437
|| ||||| || | |||| ||||| ||| | || || |||||| | |||
Sbjct 70789 -CG-ATCCAATTTAGGGCCCAATCGGCCTTTCTGGCAACGCACGGCACCGTTTCAAAGGC 70846
Query 16438 CTTAAACAA-TTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGT 16496
||| || ||||||| | | || |||| ||||| || | || | ||
Sbjct 70847 GCGAAATAAGCGGCTCTTTTCGTCGGAGTTC-TTTATGTACGTTTCTAGAAGGAGCGAGT 70905
Query 16497 ACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCG 16556
||||||| ||||| |||||||| ||||| || || || || |||||| || ||||| |
Sbjct 70906 ACATTTCGGAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAGAAGGCACGCGCCTCGG 70965
Query 16557 CTATTTGTACTTC 16569
| ||| |||||
Sbjct 70966 AGACTTGGACTTC 70978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511250747392000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |