Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq5785 122 1e-22 seq4300 118 2e-21 seq3274 86.0 9e-12 >seq5785 Length=266748 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || || || ||||| || ||| | ||| | ||| | Sbjct 171450 ATGCAGATTTTTGTGAAAACCCTCACGGGAAAAACAATCACTCTTGAGGTAGAAAGCTCT 171391 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| ||||||||||| || || ||||| ||||| ||||| Sbjct 171390 GACACCATTGACAATGTGAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAG 171331 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| |||||||| ||||| || | || ||| | | || | | ||| ||||| Sbjct 171330 CAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAAC 171271 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||| ||| | || |||||| | || | || |||||||| Sbjct 171270 ATTCAGAAAGAATCCACTCTCCACTTGGTTCTTCGCCTCCGTGGTGGTAT 171221 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || || || ||||| || ||| | ||| ||||| | Sbjct 242886 ATGCAGATCTTTGTGAAAACGCTCACCGGAAAAACAATTACTCTTGAGGTTGAAAGTTCT 242827 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || || | ||| ||||||||||| || || ||||| ||||| ||||| Sbjct 242826 GACACCATCGACAACGTGAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAG 242767 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| |||||||| ||||| || | || ||| | | || | | ||| ||||| Sbjct 242766 CAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAAC 242707 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| |||||||| ||| | || |||||| | || | || |||||||| Sbjct 242706 ATTCAGAAAGAATCCACTCTCCACTTGGTTCTTCGCCTCCGTGGTGGTAT 242657 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| ||||||| || || || |||||||| || | ||| | ||| Sbjct 168028 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAAACTATCACCCTTGAGGTGGAAAGCTCC 167969 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| || ||||| || || ||||| || ||||| || || Sbjct 167968 GACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAG 167909 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||||||||| || |||||| | |||||| | || || | | || ||||| Sbjct 167908 CAAAGGCTTATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACCCTTGCCGACTATAAC 167849 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || || || | || |||| | ||| || | ||||| || Sbjct 167848 ATTCAGAAGGAGTCCACACTCCACCTGGTCCTCCGTCTAAGGGGTGGAAT 167799 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || || || |||||||||||| | ||| ||||| | Sbjct 171678 ATGCAGATTTTTGTGAAAACCCTTACCGGTAAAACTATAACTTTGGAGGTTGAAAGCTCT 171619 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| | || || ||||| || || ||||| || || |||||||| Sbjct 171618 GACACAATTGACAATGTCAAGGCTAAGATTCAGGACAAGGAAGGCATCCCTCCTGATCAG 171559 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || | || ||||| || |||||| | || ||| | ||||| ||| || || || Sbjct 171558 CAGAGATTGATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACTCTAGCTGACTACAAC 171499 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || ||||| | || ||||| | ||| | || |||||||| Sbjct 171498 ATACAGAAGGAGTCAACCCTCCACTTGGTGCTCCGTCTCCGTGGTGGTAT 171449 Score = 104 bits (114), Expect = 4e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || ||||| || ||| | ||| | || Sbjct 165843 ATGCAAATTTTTGTGAAGACTCTCACTGGAAAAACAATCACTCTGGAGGTAGAGAGTTCG 165784 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| |||| | || || || |||||||| ||||| || ||||| ||||| Sbjct 165783 GACACCATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCAGATCAG 165724 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | ||||||||||| || || | || ||| | | || | | ||| || || Sbjct 165723 CAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAAGATGGGAGGACCCTTGCAGACTACAAC 165664 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 ||||| || ||||| || ||||||||||| || Sbjct 165663 ATTCAGAAGGAATCCACATTGCATTTGGTGTT 165632 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || || || || ||||||||| | ||| ||||| | Sbjct 243114 ATGCAGATTTTTGTGAAAACCCTGACCGGTAAGACTATAACTTTGGAGGTTGAAAGCTCT 243055 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| | || || || || || || || || || |||||||||||| Sbjct 243054 GACACAATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGAATCCCACCTGATCAA 242995 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | || ||||| || |||||| | || ||| |||| || | | || || || Sbjct 242994 CAGAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCGTACTCTTGCTGACTACAAC 242935 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || ||||| | |||||||| | ||| | || |||||||| Sbjct 242934 ATACAGAAGGAGTCAACCCTCCATTTGGTGCTTCGTCTCCGTGGTGGTAT 242885 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || ||||| || ||| | ||| | || Sbjct 167116 ATGCAAATTTTTGTGAAGACTCTCACTGGAAAAACAATCACTCTGGAGGTAGAGAGTTCG 167057 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| |||| | || || || |||||||| || || || ||||| ||||| Sbjct 167056 GACACCATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATTCCACCAGATCAG 166997 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | ||||||||||| || || | || ||| | | || | | ||| || || Sbjct 166996 CAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAAGATGGGAGGACCCTTGCAGACTACAAC 166937 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 ||||| || ||||| || ||||||||||| || Sbjct 166936 ATTCAGAAGGAATCCACATTGCATTTGGTGTT 166905 >seq4300 Length=903212 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || || | ||||| || || || ||||| || ||| | ||| | || ||| Sbjct 850814 ATGCAGATTTTCGTCAAGACTCTTACTGGGAAAACAATTACTCTGGAGGTGGAGAGCTC- 850872 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || || ||||| ||||| ||||| || ||||||||||| Sbjct 850873 TGATACCATTGACAATGTCAAGGCTAAGATTCAGGATAAGGAAGGGATTCCACCTGATCA 850932 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||| || || || | |||||| | ||||| |||| |||||||| Sbjct 850933 GCAGAGGCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGAACTTTAGCTGATTATAA 850992 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 |||||||| || || || | ||| | || | ||| | || |||||| Sbjct 850993 CATTCAAAAGGAGTCCACGCTCCATCTTGTCCTCCGTCTTCGTGGTGGT 851041 Score = 91.5 bits (100), Expect = 2e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || || | || || ||||| || || || || ||| | ||| | || || | Sbjct 755673 ATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTCGAGGTGGAGAGTTCA 755732 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| |||| | || || || ||||| || || || || ||||| ||||| Sbjct 755733 -GATACTATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAGGGGATCCCACCAGATCA 755791 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || ||||||||||||||||| || || | || || || | || || || Sbjct 755792 ACAAAGATTGATCTTTGCAGGAAAACAATTGGAAGACGGCCGCACGTTGGCTGACTACAA 755851 Query 124718 TATTCAAAAAGAATCAACT 124736 || || ||||| |||||| Sbjct 755852 CATCCAGAAAGAGTCAACT 755870 Score = 86.0 bits (94), Expect = 9e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || || | || || ||||| || || || || ||| | ||| | || || | Sbjct 818164 ATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTCGAGGTGGAGAGTTCA 818223 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| |||| | ||| || || ||||| || || || || || || ||||| Sbjct 818224 -GATACGATTGATAATGTCAAAGCCAAGATCCAAGACAAGGAGGGGATCCCGCCAGATCA 818282 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || ||||| || || ||||| || || | || || || | || ||||| Sbjct 818283 ACAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGCCGTACGTTGGCTGACTATAA 818342 Query 124718 TATTCAAAAAGAATCAACT 124736 ||| || ||||| |||||| Sbjct 818343 TATCCAGAAAGAGTCAACT 818361 >seq3274 Length=969234 Score = 86.0 bits (94), Expect = 9e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| ||||| | || || ||||| || || || || || | ||| ||||| Sbjct 910346 ATGCAGATATTCGTTAAAACCCTAACGGGTAAGACGATCACCCTTGAGGTTGAAAGCTCC 910405 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || ||| | || || ||||||||||| ||||| || || |||||||| Sbjct 910406 GATACTATCGACAATGTTAAGGCCAAGATTCAAGATAAGGAAGGGATTCCTCCTGATCAG 910465 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || || || || || || | || ||| | || || | | |||||||| Sbjct 910466 CAGCGTCTGATCTTCGCCGGGAAGCAGCTTGAAGATGGCCGTACTCTGGCCGATTATAAC 910525 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || |||||||||||| | || | ||| | ||| | || || ||||| Sbjct 910526 ATCCAGAAAGAATCAACTCTCCACCTTGTTCTGCGTCTCCGTGGAGGTAT 910575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755214254080000