Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq18882 109 5e-19 seq5117 89.7 5e-13 seq20901 86.0 6e-12 >seq18882 Length=869960 Score = 109 bits (120), Expect = 5e-19 Identities = 117/152 (77%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 14263 ||||||||||| || || || |||||||||| || | |||||||| ||||||||| Sbjct 814223 CACGCAAAATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTGAGAATGTTAAT 814282 Query 14264 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGAT-CCGGAAAAGAA 14322 || ||||| || ||||| ||||| | ||||||||| || || || | || || ||||| Sbjct 814283 CCCGGCATTAACCCTCGCTTTTTGAGCCAAAATATCGC-GCAAAAACTCCCTGAGAAGAA 814341 Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATC 14354 || ||||| || ||||||||| ||||||| Sbjct 814342 AATCCCCTCCACGCAAGCAAACGCGATTAATC 814373 >seq5117 Length=452333 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 14263 || ||||| ||||||||||| |||||||||||| ||||| ||||| || || || || Sbjct 190495 CAAGCAAAGTCACAATGAAGCCCCTCATCTCTAGATATAAGCTCGTTCGAGAACGTCAAA 190436 Query 14264 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 14302 |||||||||| ||| | ||||| | ||| ||||| ||| Sbjct 190435 CCTGGCATCAGTCCCCTCTTTTTAAGCCAGAATATGGCA 190397 >seq20901 Length=225483 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/161 (72%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 14201 AAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTT 14260 || ||||| ||||| || || || || || |||| || || |||||||| || ||| Sbjct 70611 AAGCACGCGAAATCGCAGTGGAGTCCTTCGTCTCGCGAGATTAGCTCGTTTGAGAAGGTT 70670 Query 14261 AATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAG 14320 | || ||||| || || || ||||||||||||||||| || ||| || || || Sbjct 70671 AGCCCCGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCGCAGAAACTGCCCGAGAAA 70730 Query 14321 AATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCC 14361 ||||| || || || |||||||||||| | || ||||| Sbjct 70731 AATATCCCTTCCACGCAAGCAAACGCTATCAGTC--TCTCC 70769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482191249408000