Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq5785 84.2 2e-11 >seq5785 Length=266748 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| |||||| | ||||| ||||| ||||| | || || ||| ||| Sbjct 171678 ATGCAGATTTTTGTGAAAACCCTTACCGGTAAAACTATAACTTTGGAGGTTGAA---AGC 171622 Query 24892 ---GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGAC 24948 |||| | || | ||| |||| || ||| | || |||||| | || ||| Sbjct 171621 TCTGACACAATTGACAATGTCAAGGCTAAGATTCAGGACAAGGAAGGCATCCCTCCTGAT 171562 Query 24949 CAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTAC 25008 ||||| | || || | ||| ||||||||||| |||||| | ||| | || ||| Sbjct 171561 CAGCAGAGATTGATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACTCTAGCTGACTAC 171502 Query 25009 AGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 | ||||||||| ||| | || || || || ||| | || | || || ||| Sbjct 171501 AACATACAGAAGGAGTCAACCCTCCACTTGGTGCTCCGTCTCCGTGGTGGT 171451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418173489152000