Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq5785 84.2 2e-11
>seq5785
Length=266748
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/231 (68%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| ||||| |||||| | ||||| ||||| ||||| | || || ||| |||
Sbjct 171678 ATGCAGATTTTTGTGAAAACCCTTACCGGTAAAACTATAACTTTGGAGGTTGAA---AGC 171622
Query 24892 ---GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGAC 24948
|||| | || | ||| |||| || ||| | || |||||| | || |||
Sbjct 171621 TCTGACACAATTGACAATGTCAAGGCTAAGATTCAGGACAAGGAAGGCATCCCTCCTGAT 171562
Query 24949 CAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTAC 25008
||||| | || || | ||| ||||||||||| |||||| | ||| | || |||
Sbjct 171561 CAGCAGAGATTGATCTTTGCTGGCAAACAACTTGAAGATGGCCGAACTCTAGCTGACTAC 171502
Query 25009 AGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059
| ||||||||| ||| | || || || || ||| | || | || || |||
Sbjct 171501 AACATACAGAAGGAGTCAACCCTCCACTTGGTGCTCCGTCTCCGTGGTGGT 171451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418173489152000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |