Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq20901 152 7e-32
seq18882 152 7e-32
seq22035 93.3 6e-14
>seq20901
Length=225483
Score = 152 bits (168), Expect = 7e-32
Identities = 394/591 (67%), Gaps = 16/591 (3%)
Strand=Plus/Plus
Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011
||| ||| || |||||||||||||| || || ||||||| ||||| ||||| || |
Sbjct 70606 ACAACAAGCACGCGAAATCGCAGTGGAGTCCTTCGTCTCGCGAGATTAGCTCGTTTGAGA 70665
Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGC---AAATGACC 50068
| || || || ||||||| || |||||||| | ||||||||| | ||| || || ||
Sbjct 70666 AGGTTAGCCCCGGCATTAACCCGCGCTTTTTTAACCAAAATATCG-CGCAGAAACTGCCC 70724
Query 50069 CAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--ATAACT-GG 50125
||||| || || ||||| || ||||| || | |||||||| | || || |
Sbjct 70725 GAGAAA--AATATCCCTTCCACGCAAGCAAACGCTATCAGTCTCTCCGCGAATGTCTCCG 70782
Query 50126 CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185
|| ||| ||||| ||| | |||||||||||||| | || || |||| |||||
Sbjct 70783 AGCCGTC---GATCCAATTTAGGGCCCAATCGGCCTTTCTGGCAACGCACGGCACCGTTT 70839
Query 50186 CTATGGCATTAAAGAGATAGtttttttCAT--TACTATCTTTAACATAAGTATCGATCAA 50243
| | ||| ||| | | | ||||| | | | ||||| | || || || | |
Sbjct 70840 CAAAGGCGCGAAATAAGCGGCTCTTTTCGTCGGAGT-TCTTT-ATGTACGTTTCTAGAAG 70897
Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303
|| |||||||| || || ||||| || ||||| || || || |||||||| |
Sbjct 70898 GAGCGAGTACATTTCGGAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAGAAGGCACG 70957
Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363
||||||| | || |||||| | || | |||| | ||||| || |||||
Sbjct 70958 CGCCTCGGAGACTTGGACTTCTTTCATGAACCTGGCAGCGAGGTTTTCGAGGACGATTCC 71017
Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG 50423
|| ||| || || || || | || || | || || ||||| |||| || |||||
Sbjct 71018 ATCCGAGGCGGCGAAGAAGGCGAGCACGTGAGTGATGAAGTGTTTCTCGTCGGCGGTTAG 71077
Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483
| ||| | ||| || | || | || || || ||| | ||||||||||| ||
Sbjct 71078 GGATTCCCACTGGCGGATGTCCTGCGACAGGTCGACCTCCTCCGCCGTCCAAAATGAAGC 71137
Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAAT 50534
|| || || || ||||| | |||||| || | || |||||||| || ||
Sbjct 71138 TTCGGCTTTCTTGTACATTTCCCAGATTTCCGGGTACTGGATTGGAAACAT 71188
>seq18882
Length=869960
Score = 152 bits (168), Expect = 7e-32
Identities = 409/623 (66%), Gaps = 2/623 (0%)
Strand=Plus/Plus
Query 49949 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 50008
|| ||| || || || ||||||||||| |||||||| |||| || | ||||| |
Sbjct 814212 TATACAACAGGCACGCAAAATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTG 814271
Query 50009 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGC-AAATGAC 50067
| || || | ||| ||||||| || |||||||| ||||||||||| | ||| ||| |
Sbjct 814272 AGAATGTTAATCCCGGCATTAACCCTCGCTTTTTGAGCCAAAATATCG-CGCAAAAACTC 814330
Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG 50127
|| || ||||| || || || || ||||| || | | |||||| | || | |
Sbjct 814331 CCTGAGAAGAAAATCCCCTCCACGCAAGCAAACGCGATTAATCTCTCGGCGAAAGTCTCC 814390
Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187
| | | ||||| ||| ||||| ||| |||||| || || || | ||||||
Sbjct 814391 GAGCCGTCGATCCAATTTAACGCCCACGTGGCTTTCTTTGCGACGCAGGGAACCGTTTCG 814450
Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247
||||| | ||||||| || ||||| | | ||| | ||||| || | | ||
Sbjct 814451 ATGGCGTGAAAGAGACGATTCTTTTCGTCGGAGTTTTTGATGTAAGTTTCTAGAAGCAGC 814510
Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307
|||||||| || || ||||| |||||||| || || || |||||||| | |||
Sbjct 814511 GAGTACATTTCGGAGTGGATGTTCTCAATGGCGATTTGGAAGCCGTAGAAGGCACGCGCC 814570
Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCA 50367
|||| | ||| || || || || | | || | || || || || |||||
Sbjct 814571 TCGGCGACCTGGACCTCCGTCATGAACCTGCCGGCGAGGTTCTCGAGGACGATGCCGTCG 814630
Query 50368 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTA 50427
||| || || || || | || || | | || || || |||| | |||||
Sbjct 814631 GAGGCGGCGAAGAAGGCGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAGGGCC 814690
Query 50428 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCT 50487
| ||| | || ||||| || | ||| ||||| || | |||||||| || || ||
Sbjct 814691 TCCCAGTGGCGGAGATCTTGCGAAAGATCAACTTCCTCAGCGGTCCAAAACGACGCTTCG 814750
Query 50488 GCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTT 50547
|| || || ||||| | ||| || | | || || || ||||| ||| ||||| ||
Sbjct 814751 GCTTTCTTGTACATTTCCCAAATTTGTGGGTACTGAATCGGGAACATACAAAATCGATCG 814810
Query 50548 GGATTTGGTGCAAGGATCGGTTC 50570
|||||||| || || | ||| ||
Sbjct 814811 GGATTTGGGGCTAGAAGCGGCTC 814833
>seq22035
Length=61329
Score = 93.3 bits (102), Expect = 6e-14
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394
||||| |||||||| | || ||||| || || ||||||||| || ||||| | || |
Sbjct 16980 GTTCCAGCATTAAAAAGTGTGGGAGATGCATGGGTAAACCATCGTTGAGACATCATATGG 16921
Query 80395 TACGTCTCAATAGCTGATTCTATATCC-CATTGATGAATTCCTACCGCGACACGCATTAA 80453
|| || | ||||| || || || || | ||| || | || || || || | ||| ||
Sbjct 16920 TATGTTTTGATAGCAGAATCAATGTCATCCTTG-TGCAACCCAACAGCAACCCTCATCAA 16862
Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATT-TATTTTCAACAAGTAAGATTTTTCCA 80512
||| || ||||||||||| || | ||| | || | ||||| | ||| || | ||||
Sbjct 16861 CATATGTTGAGGTCTTTCTAC-AACTTTTCCTTGGACCTTCAAGAGGTAGGACCTCTCCA 16803
Query 80513 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561
||||| || |||||||| | || ||| || || ||||| |||||
Sbjct 16802 GGGTTTTGAAGCCAAAATAATCATAGTCAAAATCCCGATCGTAGATAAT 16754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718038953984000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |