Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq18882 134 2e-26 >seq18882 Length=869960 Score = 134 bits (148), Expect = 2e-26 Identities = 379/564 (67%), Gaps = 26/564 (5%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 ||||||||||||||||| || || | || || |||||||| | || || || ||||| Sbjct 814773 ATTTGGGAAATGTACAAGAAAGCCGAAGCGTCGTTTTGGACCGCTGAGGAAGTTGATCTT 814714 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG----TTTAT 125134 || | || || | | |||||| | | | || | |||| ||||| || | Sbjct 814713 TCGCAAGATCTCCGCCACTGGGAGGCCC---TAACCG---CTGA-CGAGAAGCACTTCGT 814661 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 ||||| | | |||||||| |||| |||||| || |||||| ||| || || | | Sbjct 814660 CACGCACGTGCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTCGAGAACCTCGCCGG 814601 Query 125194 CACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGTGCTTT-TACGGATTCCAAA 125250 || | | | | ||| | ||| || | |||| | ||||| || ||||| ||||||| Sbjct 814600 CAGGTTCATGACG-GAGGT--CCAGGTCGCCGAGGCG-CGTGCCTTCTACGGCTTCCAAA 814545 Query 125251 TCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCG 125310 || ||||||||| | ||||| ||||||||||| || | || | ||||| | Sbjct 814544 TCGCCATTGAGAACATCCACTCCGAAATGTACTCGCTGCTTCTAGAAACTTACAT-CAAA 814486 Query 125311 ATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA 125369 | | | ||| ||| | | |||||| |||| ||||| ||||| || | | || ||| Sbjct 814485 AACTCCGACGAAAAGAATCGTCTCTTTCACGCCATCGAAACGGTTCCCTGCGT-CGCAAA 814427 Query 125370 -AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACT 125428 || || |||| | | |||||||| | | || ||| |||||| ||| | Sbjct 814426 GAAAGCCACGTGGGCGTTAAATTGGATCGACGGCTCGGAGACTTT---CGCCGAGAGATT 814370 Query 125429 GGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTG 125488 | || || || ||| ||||| || ||||| || || |||||| || || ||||| Sbjct 814369 AATCGCGTTTGCTTGCGTGGAGGGGATTTTCTTCTCAGGGAGTTTTTGCGCGATATTTTG 814310 Query 125489 GCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGA 125548 |||||| ||||| || | ||||| ||| | || | |||||||| || || ||||| Sbjct 814309 GCTCAAAAAGCGAGGGTTAATGCCGGGATTAACATTCTCAAACGAGTTGATCTCGCGAGA 814250 Query 125549 CGAGGGCCTACACTGTGACTTTGC 125572 ||||| || ||||| || ||||| Sbjct 814249 TGAGGGTCTCCACTGCGATTTTGC 814226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740822061056000