Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq5785 82.4 5e-11
seq4300 82.4 5e-11
>seq5785
Length=266748
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||| | || ||| ||||||||||| | ||| || || ||||| || || || |
Sbjct 165617 CCTCCACGCAGTCTCAACACCAAATGCAATGTGGATTCCTTCTGAATGTTGTAGTC-TGC 165675
Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | | | |||| || | || || |||||||| ||||||| ||||| || | ||
Sbjct 165676 AAGGGTCCTCCCATCTTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGATCTGGTGG 165735
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| ||||| |||||| || || || || || ||| || || | ||| ||
Sbjct 165736 AATGCCTTCCTTATCTTGGATCTTGGCCTTCACATTATCAATGGTGTCCGAACTCTCTAC 165795
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
|| | || |||||||| || || | |||||||||||| |||||||||
Sbjct 165796 CTCCAGAGTGATTGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCATG 165844
>seq4300
Length=903212
Score = 82.4 bits (90), Expect = 5e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024
|||| || | ||||| || || || |||||||| ||||| ||| | || | ||||| |
Sbjct 740888 CATCCTCAAGCTGTTTGCCGGCGAAGATCAACCGCTGCTGATCCGGTGGAATCCCTTCCT 740829
Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084
||||| |||||| ||||| | ||| || |||| ||| || || | ||||
Sbjct 740828 TATCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTCTCAACTTCCAAAGTAA 740769
Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
||||||| || || | ||||| |||||||| ||||||
Sbjct 740768 TTGTTTTCCCAGTAAGGGTCTTAACAAATATCTGCATG 740731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354666909388800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |