Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq5785 82.4 5e-11 seq4300 82.4 5e-11 >seq5785 Length=266748 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||| | || ||| ||||||||||| | ||| || || ||||| || || || | Sbjct 165617 CCTCCACGCAGTCTCAACACCAAATGCAATGTGGATTCCTTCTGAATGTTGTAGTC-TGC 165675 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | | | |||| || | || || |||||||| ||||||| ||||| || | || Sbjct 165676 AAGGGTCCTCCCATCTTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGATCTGGTGG 165735 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||| |||||| || || || || || ||| || || | ||| || Sbjct 165736 AATGCCTTCCTTATCTTGGATCTTGGCCTTCACATTATCAATGGTGTCCGAACTCTCTAC 165795 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || | || |||||||| || || | |||||||||||| ||||||||| Sbjct 165796 CTCCAGAGTGATTGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCATG 165844 >seq4300 Length=903212 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| || | ||||| || || || |||||||| ||||| ||| | || | ||||| | Sbjct 740888 CATCCTCAAGCTGTTTGCCGGCGAAGATCAACCGCTGCTGATCCGGTGGAATCCCTTCCT 740829 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 ||||| |||||| ||||| | ||| || |||| ||| || || | |||| Sbjct 740828 TATCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTCTCAACTTCCAAAGTAA 740769 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 ||||||| || || | ||||| |||||||| |||||| Sbjct 740768 TTGTTTTCCCAGTAAGGGTCTTAACAAATATCTGCATG 740731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354666909388800