Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq20901 111 1e-19 >seq20901 Length=225483 Score = 111 bits (122), Expect = 1e-19 Identities = 306/460 (67%), Gaps = 12/460 (3%) Strand=Plus/Plus Query 12845 GACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCT 12904 ||||| ||||| ||||| ||||| | ||||| || ||||| || || || || ||| Sbjct 70308 GACATCACAGAAGCCTTTTGGTATTCCCCGACTCTCTTCTCAAAGAAATTCGTCTTCCCT 70367 Query 12905 TCTAACGAAATATTTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACAC 12964 | | |||||| ||||| |||| || ||||| || || || || ||| Sbjct 70368 TGAAGCGAAATCAACTCCATCCAATCAAACGGATTCGTCACACCGTACACCTTCCCGCAC 70427 Query 12965 CCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAG 13024 || | | ||||| || || || ||||||||||||||||| |||| || | | | Sbjct 70428 CCCAGCGCACCCAACAACCTATCTGCCACAAACTCTATGTACTGACTCATCAACGCCCCG 70487 Query 13025 TTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACT 13084 ||||| || | ||| |||| || || | || | | ||||| || || Sbjct 70488 TTCATCCCCACCAATGCGCACGGCAGCGCGTCGCACACGAACTCCCTCTCTATCTCCACC 70547 Query 13085 GCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----AG-ATGCT 13139 || || | ||||| | ||| || || || | ||||| | || | ||| Sbjct 70548 GCCTCCTTCACTATCCC-CTTCACGCGCTC-CTCGCTTA--ATTTGTTCCTCAGCAAGCT 70603 Query 13140 TAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTG 13199 | || || || || ||||| ||||| | |||||| |||| ||||||||||||| Sbjct 70604 GTA-CAACAAGCACGCGAAATCGCAGTGGAGTCCTTCGTCTCGCGAGATTAGCTCGTTTG 70662 Query 13200 AAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA-AACGAA 13258 | || ||||| |||||||| | ||| || ||||| | ||||||||| || ||| || Sbjct 70663 AGAAGGTTAGCCCCGGCATTAACCCGCGCTTTTTTAACCAAAATATCGC-GCAGAAACTG 70721 Query 13259 CCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCA 13298 ||||| |||||||| ||||| || ||||||||||||| Sbjct 70722 CCCGAGAAAAATATCCCTTCCACGCAAGCAAACGCTATCA 70761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430847933491200