Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq3274 107 2e-18
seq4300 104 2e-17
seq5785 86.0 5e-12
>seq3274
Length=969234
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TC 48573
||||| | |||||| || ||||| |||||||||||||| || | ||| || ||
Sbjct 910785 AACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCGAGC-GTCCTTCCATC 910727
Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633
||||| |||||| ||| || | || ||||||||||||||| || | | |||||||||
Sbjct 910726 CTCCAACTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGTGGAATCCCTTCCTTGTC 910667
Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
| ||| || ||||| | | |||||||| | | |||| ||| | || || ||
Sbjct 910666 CTGAATCTTGGCCTTGACATTGTCAATGGTATCCGAACTCTCCACCTCCAGGGTGATAGT 910607
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| | ||| || || |||||||||||
Sbjct 910606 CTTCCCGGTCAAAGTCTTGACGAAAATCTGCAT 910574
Score = 89.7 bits (98), Expect = 4e-13
Identities = 144/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
||||| || ||||||||| || |||||||||||||| || ||||||| || |||
Sbjct 910092 TGAAGCGTCGACTCCTTTTGGATATTGTAATCAGCCAAGGTGCGGCCGTCCTCGAGTTGC 910033
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| || || | || | | |||||| ||| ||| | | |||||||||| || ||
Sbjct 910032 TTTCCAGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTG 909973
Query 48644 TGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701
||||| | | || || || |||| | ||| |||| || ||||| || ||||
Sbjct 909972 GCCTTGACGTTGTCG--ATCGTGTCGGAACTCTCGACTTCGAGGGTAATGGTCTTGCCGG 909915
Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726
| || |||||||| || ||||||||
Sbjct 909914 TTAGGGTTTTCACGAAGATCTGCAT 909890
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCT 48581
||| || ||| |||||| ||||||||||||||||| || || || | ||||| ||||
Sbjct 911005 ATGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGC-AAGGGTACGGCCATCCTCGAGCT 910947
Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641
|||| || || | || | | ||||||||| || | | |||||||||| ||| |
Sbjct 910946 GCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGAATCCCTTCCTTGTCCTGAATCT 910887
Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701
| ||||| | | |||||||| | | ||| ||| | || || || || ||||
Sbjct 910886 TGGCCTTGACATTGTCAATGGTATCAGAACTCTCTACCTCCAGGGTAATCGTCTTCCCGG 910827
Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726
| | || || ||||||||||||||
Sbjct 910826 TCAATGTCTTAACAAAAATCTGCAT 910802
>seq4300
Length=903212
Score = 104 bits (114), Expect = 2e-17
Identities = 141/195 (72%), Gaps = 4/195 (2%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| || ||||||||||| ||||| ||| ||||||| |||||||| ||| || |
Sbjct 191508 CTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAA 191449
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652
|| | |||||||| ||| || | | |||||||||| || || ||||| |
Sbjct 191448 GATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 191389
Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712
| || || || |||| |||| ||||| || ||||| || ||||| | ||||||
Sbjct 191388 GTCG--ATCGTGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTTT 191331
Query 48713 ACAAAAATCTGCATC 48727
||||| |||||||||
Sbjct 191330 ACAAAGATCTGCATC 191316
Score = 96.9 bits (106), Expect = 3e-15
Identities = 139/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
|| ||||||||||||||||| ||||| || |||| || || ||||| ||| | |
Sbjct 850548 TCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCGGCAAAG 850489
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAG 48653
|| | ||||||||| ||| ||| | | ||||||||| || || ||||| | |
Sbjct 850488 ATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 850429
Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713
|| ||||| |||| |||| |||| || || || || |||||||| |||||||
Sbjct 850428 TCG--ATGGTGTCGGAGCTCTCCACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTTTTCA 850371
Query 48714 CAAAAATCTGCATC 48727
|||| |||||||||
Sbjct 850370 CAAATATCTGCATC 850357
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| | ||| || || ||||||||| ||||||||||| ||||| || |||||||
Sbjct 191754 CACAAGATGGAGCGTCGACTCCTTTTGGATGTTGTAATCGGCCAAGGTGCGGCCGTCCTC 191695
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
||||||||| ||| || | || | | |||||| ||| || | | ||||||||||
Sbjct 191694 CAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGAATCCCTTCCTTGTCCTG 191635
Query 48637 AATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694
|| || ||| | | | || ||||| |||| |||| ||| | || || ||
Sbjct 191634 GATCTTGGCCTTCACGTTGTCG--ATGGTGTCGGAGCTCTCCACCTCCAGAGTGATCGTC 191577
Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| || || || ||||| ||||||||
Sbjct 191576 TTCCCGGTCAGGGTCTTGACAAAGATCTGCAT 191545
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582
||| || ||| ||||||||||||||| |||||||| || ||| | ||||| |||||
Sbjct 851017 ATGGAGCGTGGACTCCTTTTGAATGTTATAATCAGCTAAAGTTCGGCCATCCTCAAGCTG 850958
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || | | || | | ||||||||| || | | |||||| ||| ||| ||
Sbjct 850957 CTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGAATCCCTTCCTTATCCTGAATCTT 850898
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
||||| | | |||||||| | |||| ||| | || || ||||| || ||
Sbjct 850897 AGCCTTGACATTGTCAATGGTATCAGAGCTCTCCACCTCCAGAGTAATTGTTTTCCCAGT 850838
Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726
||||| || || |||||||||||
Sbjct 850837 AAGAGTCTTGACGAAAATCTGCAT 850814
Score = 87.8 bits (96), Expect = 2e-12
Identities = 137/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| || ||||||||||||||||| || | || || || ||||| ||| || |
Sbjct 817899 CTCCTTCTGGATGTTGTAATCAGCCAAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAA 817840
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652
|| | ||||||||||||| || | | ||||||||| || || ||||| |
Sbjct 817839 GATAAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTT 817780
Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712
| || ||||| || | |||| |||| || || ||||| ||||| || ||||||
Sbjct 817779 GTCG--ATGGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGTTTTC 817722
Query 48713 ACAAAAATCTGCAT 48726
|| || ||||||||
Sbjct 817721 ACGAAGATCTGCAT 817708
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|| ||||| | ||| | || | ||| | ||| || ||||| ||||||||||| |||
Sbjct 755671 CCACCGCGGAGCCTGAGGACAAGATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGCC 755612
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
|| || | || || || ||||| ||| || | || | ||||||||||||| ||
Sbjct 755611 AAGGTGCGGCCATCTTCGAGTTGCTTTCCGGCGAAGATAAGACGCTGCTGATCCGGAGGG 755552
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCG 48677
| | ||||||||| || || ||||| | | || ||||| || | ||||
Sbjct 755551 ATCCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG--ATGGTGTCAGAGCTCTCCA 755494
Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||| || || ||||| ||||| || |||||||| || ||||||||
Sbjct 755493 CTTCGAGAGTGATTGTTTTGCCGGTTAGGGTTTTCACGAAGATCTGCAT 755445
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| || ||||||||||| ||||| || ||||||| |||||||| || || |
Sbjct 740239 CTCCTTCTGTATGTTGTAATCGGCCAAGGTGCGACCGTCCTCGAGCTGCTTTCCAGCGAA 740180
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652
|| | | |||||| || || | | |||||||| ||| ||| ||||| |
Sbjct 740179 TATAAGCCTCTGCTGGTCAGGGGGGATTCCCTCCTTGTCTTGAATCTTCGCCTTGACGTT 740120
Query 48653 GACGCTATGGTATCGGTAGACTC-CGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTT 48710
| || ||||| |||| || ||| || | |||| || || ||||| ||||| || ||||
Sbjct 740119 GTCG--ATGGTGTCGG-AG-CTCTCGACTTCGAGAGTAATAGTTTTGCCGGTCAGGGTTT 740064
Query 48711 TCACAAAAATCTGCAT 48726
|||| || ||||||||
Sbjct 740063 TCACGAAGATCTGCAT 740048
>seq5785
Length=266748
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| || || ||||| |||||||| ||| | |||||||||||||| || | |
Sbjct 165424 CTCCTTCTGGATATTGTAGTCAGCCAAAGTACGCCCATCCTCCAGCTGCTTCCCAGCAAA 165483
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| || | ||||||||| || | | |||||||||| ||||| ||| | |
Sbjct 165484 GATCAACCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCCTGGATTTTAGCCTTCACATT 165543
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| || | | ||| ||| | || |||||||| || || | || |||||
Sbjct 165544 ATCAATGGTGTCTGAACTCTCAACCTCCAGGGTGATGGTTTTTCCCGTCAATGTCTTCAC 165603
Query 48715 AAAAATCTGCAT 48726
||||||||||||
Sbjct 165604 AAAAATCTGCAT 165615
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| || || ||||| |||||||| ||| | |||||||||||||| || | |
Sbjct 166697 CTCCTTCTGGATATTGTAGTCAGCCAAAGTACGCCCATCCTCCAGCTGCTTCCCAGCAAA 166756
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| || | ||||||||| || | | |||||||||| ||||| ||| | |
Sbjct 166757 GATCAACCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCCTGGATTTTAGCCTTCACATT 166816
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| || | | ||| ||| | || |||||||| || || | || |||||
Sbjct 166817 ATCAATGGTGTCTGAACTCTCAACCTCCAGGGTGATGGTTTTTCCCGTCAATGTCTTCAC 166876
Query 48715 AAAAATCTGCAT 48726
||||||||||||
Sbjct 166877 AAAAATCTGCAT 166888
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| |||| || ||||| ||||| | |||| ||||| ||||||||||| || | |
Sbjct 165617 CCTCCACGCAGTCTCAACACCAAATGCAATGTGGATTCCTTCTGAATGTTGTAGTCTG-C 165675
Query 48560 AATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| || | | | || || |||||||| || | |||| || | ||||||||| ||
Sbjct 165676 AAGGGTCCTCCCATCTTCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGATCTGGTGG 165735
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | |||||| || || || ||| | | | ||||| || | | |||
Sbjct 165736 AATGCCTTCCTTATCTTGGATCTTGGCCTTCACATTATCAATGGTGTCCGAACTCTCTAC 165795
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | || || ||||| || |||||||| ||||||||||| |||||
Sbjct 165796 CTCCAGAGTGATTGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCAT 165843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421119769625600
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