Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq5041 113 2e-20
seq20387 111 8e-20
seq23587 109 3e-19
seq3616 109 3e-19
seq24710 105 3e-18
seq14178 105 3e-18
seq24036 104 1e-17
seq19350 104 1e-17
seq24617 102 4e-17
seq22191 100 1e-16
seq20742 100 1e-16
seq18882 100 1e-16
>seq5041
Length=405719
Score = 113 bits (124), Expect = 2e-20
Identities = 78/89 (88%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|| |||| | ||||||||||||| | | |||||||| |||||||||||||||||||||
Sbjct 310618 AAAAAAACAAAAAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCAC 310677
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||||| ||||||||||||||| ||||
Sbjct 310678 GACGCTCTAACCAACTGAGCTAATAGGCC 310706
>seq20387
Length=728245
Score = 111 bits (122), Expect = 8e-20
Identities = 72/80 (90%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 11450 TCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTR 11509
|| |||||||||||| | | |||||||| |||||||||||||||||||||||||||||
Sbjct 392470 TCGAATTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTA 392411
Query 11510 ACCAACTGAGCTAATGGGCC 11529
||||||||||||||| ||||
Sbjct 392410 ACCAACTGAGCTAATAGGCC 392391
>seq23587
Length=3331512
Score = 109 bits (120), Expect = 3e-19
Identities = 71/79 (90%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
||| ||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||
Sbjct 2447213 AAAATGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 2447272
Query 11512 CAACTGAGCTAATGGGCCG 11530
||||||||||||| |||||
Sbjct 2447273 CAACTGAGCTAATAGGCCG 2447291
>seq3616
Length=2317585
Score = 109 bits (120), Expect = 3e-19
Identities = 76/87 (87%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
||||| | | |||||||||| | | |||||||| ||||||||||||||||||||||||
Sbjct 1405769 AAAAATTGATTTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 1405828
Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530
||||| ||||||||||||||| |||||
Sbjct 1405829 GCTCTAACCAACTGAGCTAATAGGCCG 1405855
>seq24710
Length=183161
Score = 105 bits (116), Expect = 3e-18
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 120341 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 120282
Query 11515 CTGAGCTAATGGGCC 11529
|||||||||| ||||
Sbjct 120281 CTGAGCTAATAGGCC 120267
>seq14178
Length=3042336
Score = 105 bits (116), Expect = 3e-18
Identities = 68/75 (91%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 2417030 TTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 2417089
Query 11515 CTGAGCTAATGGGCC 11529
|||||||||| ||||
Sbjct 2417090 CTGAGCTAATAGGCC 2417104
>seq24036
Length=484127
Score = 104 bits (114), Expect = 1e-17
Identities = 74/86 (86%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| | ||||||||| | | |||||||| |||||||||||||||||||||||||
Sbjct 323946 AAAAATACCACTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 324005
Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530
|||| |||| |||||||||| |||||
Sbjct 324006 CTCTAACCAGCTGAGCTAATAGGCCG 324031
>seq19350
Length=1202040
Score = 104 bits (114), Expect = 1e-17
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| | | |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 999006 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 998947
Query 11516 TGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 998946 TGAGCTAATAGGCC 998933
>seq24617
Length=2251309
Score = 102 bits (112), Expect = 4e-17
Identities = 73/85 (86%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
||||| ||| ||||| ||| | | |||||||| | |||||||||||||||||||||||
Sbjct 1989784 AAAAAAAAAAATGGCCTATGCAGGTCTCGAACCTACAACCTTCGCGTTATTAGCACGACG 1989725
Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529
|||| ||||||||||||||| ||||
Sbjct 1989724 CTCTAACCAACTGAGCTAATAGGCC 1989700
>seq22191
Length=361746
Score = 100 bits (110), Expect = 1e-16
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 11451 CAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510
||| |||||||||| | | |||||||| ||||||||||||||||||||||||||| | |
Sbjct 32343 CAATTTGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTGTAA 32402
Query 11511 CCAACTGAGCTAATGGGCC 11529
||||||||||||| ||||
Sbjct 32403 TCAACTGAGCTAATAGGCC 32421
>seq20742
Length=1487624
Score = 100 bits (110), Expect = 1e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||| |
Sbjct 895011 TGGCCCATGCAGGTCTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAGC 894952
Query 11516 TGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 894951 TGAGCTAATAGGCC 894938
>seq18882
Length=869960
Score = 100 bits (110), Expect = 1e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| | | |||||||| || |||||||||||||||||||||||||| ||||||
Sbjct 727017 TGGCCCATGCAGGTCTCGAACCTGCGGCCTTCGCGTTATTAGCACGACGCTCTAACCAAC 727076
Query 11516 TGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 727077 TGAGCTAATAGGCC 727090
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261409614745600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |