Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq22928 147 3e-31 seq5008 143 4e-30 seq23587 113 7e-21 seq5786 93.3 7e-15 >seq22928 Length=1244352 Score = 147 bits (162), Expect = 3e-31 Identities = 176/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 |||||||| || || ||||| ||||| |||||||| || ||||| | ||||| |||||| Sbjct 613727 GATAACATTCAGGGGATCACAAAGCCGGCTATCCGGCGGCTGGCGAGGCGTGGCGGAGTC 613786 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || || || | || || |||| ||| | |||||||||||||| | || Sbjct 613787 AAGCGTATCAGCGGTCTGATTTACGAGGAGACTCGCGGGGTTTTGAAGATCTTTTTGGAG 613846 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | ||||||| | || || ||||| ||| || |||||||||||| || Sbjct 613847 AACGTGATTCGTGATGCTGTGACTTACACTGAGCATGCTCGTCGCAAGACTGTCACCGCC 613906 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||||| | || ||||| ||||| | || ||| | | |||| ||||| || |||| Sbjct 613907 ATGGATGTTGTTTATGCTTTGAAGAGGCAGGGCAGGACCCTTTACGGTTTCGGTGGTTA 613965 >seq5008 Length=411429 Score = 143 bits (158), Expect = 4e-30 Identities = 193/269 (72%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| || | ||||| |||||||| || || ||||| |||||||| || Sbjct 167586 CGCTAAGCGTCACCGTAAGGTGCTTCGCGATAACATTCAGGGTATCACAAAGCCAGCAAT 167645 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||| ||||||| | ||||||||||||||| | ||| ||| |||| || |||| Sbjct 167646 CCGGCGTTTGGCTCGGAGAGGTGGAGTCAAGCGTATTAGTGGCTTGATCTACGAGGAGAC 167705 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || ||||||| ||| | ||| || |||| ||| || | ||| || || Sbjct 167706 ACGTGGCGTCCTGAAGATATTCTTGGAGAATGTCATCCGTGACGCCGTGACCTACACTGA 167765 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| | | ||||| || ||| | ||||| |||| || || | || | || || Sbjct 167766 GCACGCCAGGAGAAAGACCGTGACCGCGATGGACGTCGTTTACGCTCTCAAGAGGCAGGG 167825 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | | | ||||||| ||||| |||||| Sbjct 167826 CAGGACTCTTTATGGATTTGGGGGTTAAT 167854 >seq23587 Length=3331512 Score = 113 bits (124), Expect = 7e-21 Identities = 173/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| |||||||| || |||||||| ||||| || ||||| |||||||||||| | || Sbjct 3225839 TCTTCGCGATAACATTCAGGGAATCACAAAGCCCGCAATCCGGCGTCTGGCTCGTAGGGG 3225898 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| || |||||| || ||| ||| |||| || |||| |||| ||| | |||||||| Sbjct 3225899 TGGGGTGAAGCGTATCAGTGGGTTGATCTACGAGGAGACACGTGGCGTTCTCAAGATCTT 3225958 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 | | | || |||| || || | || || ||||||||| | ||||| || Sbjct 3225959 TTTGGAAAATGTCATCCGCGACGCCGTGACTTACACTGAGCACGCTCGGAGGAAGACGGT 3226018 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||||| |||| || || | || | || ||| | | | || || ||||| Sbjct 3226019 GACGGCGATGGACGTCGTGTACGCGCTCAAGAGGCAGGGCAGGACTCTCTACGGGTTTGG 3226078 Query 16693 AAGTTAA 16699 ||||| Sbjct 3226079 TGGTTAA 3226085 >seq5786 Length=788143 Score = 93.3 bits (102), Expect = 7e-15 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | ||||||| | | || || |||||||| || || || |||||||| ||||| Sbjct 129757 GCCAAGAGGCATCGCA-AGGTGTTGCGTGATAACATTCAGGGCATTACCAAGCCGGCTAT 129699 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||| |||| | | || || || ||| | || || | |||| || |||| Sbjct 129698 TCGCCGTTTGGCCAGAAGAGGCGGCGTTAAGAGAATCAGCGGTCTCATCTACGAGGAGAC 129639 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || | || |||||| | ||| ||| || | ||||||| | ||| ||||| Sbjct 129638 ACGCGGCGTGCTCAAAATCTTCTTGGAGAACGTCATTCGTGATGCTGTGACCTACACCGA 129579 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 ||||||| || ||||| || ||| | |||||| |||| ||||| Sbjct 129578 GCACGCTCGCCGGAAGACGGTGACCGCTATGGATGTCGTTTATGC 129534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79051793740800