Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq22333 533 2e-146
seq17466 367 2e-96
seq14178 158 2e-33
>seq22333
Length=1412734
Score = 533 bits (590), Expect = 2e-146
Identities = 684/943 (73%), Gaps = 0/943 (0%)
Strand=Plus/Plus
Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGCTTTATCG 211669
||||||||||||||||| | |||||||| | | | | ||||| | |||||
Sbjct 733263 TTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTA 733322
Query 211670 TAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTT 211729
| || ||||| || || ||||| || ||||| ||||| || |||||||| || |||| |
Sbjct 733323 TCGCCTTCATTGCTGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGAT 733382
Query 211730 CATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCG 211789
| | | ||||| ||||| || || |||||||| || |||| |||| || ||||
Sbjct 733383 CTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATCG 733442
Query 211790 GTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTG 211849
|||| || || || || || |||||||| ||| | ||||||| ||| | |||||||| |
Sbjct 733443 GTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCG 733502
Query 211850 GTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGAC 211909
||||||| || | | | | |||||| | | || | | |||||||| |
Sbjct 733503 GTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTG 733562
Query 211910 AGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCAC 211969
||||||||||| | |||| | ||||||||||||||||| |||||| |||||||| |
Sbjct 733563 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTC 733622
Query 211970 CTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAG 212029
|||| ||||||| ||||| ||| | | |||||| ||||||| || || || |
Sbjct 733623 CTGTTGCAGCAGCGGCTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTG 733682
Query 212030 ACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAAC 212089
| ||||||||| |||| || || || || |||||||||||| | |||||||| || || |
Sbjct 733683 ATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGC 733742
Query 212090 ATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCAT 212149
| ||||||||||||||||||||||| ||| ||| || || ||| | ||||| || |
Sbjct 733743 ACAACATCCTTATGCACCCATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCC 733802
Query 212150 TATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTT 212209
||||| ||||||||| ||||| | || || ||| | ||| | |||||||| |
Sbjct 733803 TATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAA 733862
Query 212210 TAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTG 212269
|| || || | ||||||| ||||| ||||| ||||| || ||||| ||||| |
Sbjct 733863 ATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAG 733922
Query 212270 CTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAA 212329
|||| || || || || || || | |||||||| ||||| |||||||| |
Sbjct 733923 CTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTT 733982
Query 212330 GTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTA 212389
|||||| |||||||| || | |||||||| | || | ||||| || || | ||||
Sbjct 733983 CTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTA 734042
Query 212390 TCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCAT 212449
| |||| ||||| |||||||||||||| ||||| ||||||||||| || ||||||
Sbjct 734043 TTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTC 734102
Query 212450 CAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAG 212509
|||| || || ||| |||| |||| || |||| | || ||||||||||||||||
Sbjct 734103 AAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAG 734162
Query 212510 TTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552
||||||| ||| | ||||| || |||||||| || ||| ||||
Sbjct 734163 TTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 734205
Score = 228 bits (252), Expect = 1e-54
Identities = 311/433 (72%), Gaps = 1/433 (0%)
Strand=Plus/Plus
Query 212121 AGGTGTT-GCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCACGGTTCTCTTGTTA 212179
|| |||| || ||| | ||||| || | ||||| ||||||||| ||||| | || |
Sbjct 732395 AGCTGTTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAA 732454
Query 212180 CATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTATGGTTACAAGTTCG 212239
| ||| | ||| | |||||||| | | || || | ||||||| ||||
Sbjct 732455 CCTCTAATTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCG 732514
Query 212240 GACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTCGGTAGACTTATCT 212299
| ||||| ||||| || ||||| ||||| ||||| || || || || || || | ||||
Sbjct 732515 GTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCT 732574
Query 212300 TCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCTCGCATCATGGCCTG 212359
|||| ||||| |||||||| | |||||| |||||||| || | |||||||
Sbjct 732575 TCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTG 732634
Query 212360 TTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACCTAAATGGAT 212419
| | || | ||||| || || | ||||| |||| ||||| |||||||||||||| |
Sbjct 732635 TAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTT 732694
Query 212420 TCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCTACTTGGGGTGATG 212479
|||| ||||||||||| || |||||| |||| || || ||| |||| ||||
Sbjct 732695 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATA 732754
Query 212480 TTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAATGCACACAACTTCC 212539
|| |||| | || ||||||||||||||||||||||| ||| | ||||| || |||||||
Sbjct 732755 TTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCC 732814
Query 212540 CACTTGACTTAGC 212552
| || ||| ||||
Sbjct 732815 CTCTAGACCTAGC 732827
>seq17466
Length=9900
Score = 367 bits (406), Expect = 2e-96
Identities = 421/566 (74%), Gaps = 0/566 (0%)
Strand=Plus/Plus
Query 211987 GCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGGT 212046
||||| ||| | |||| || | ||||| || ||||| || ||||||||||||||
Sbjct 9178 GCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 9237
Query 212047 ATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAACATAACATCCTTATGCAC 212106
||||| || || |||||||| ||| | |||||||| || || || ||||||||||||||
Sbjct 9238 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCAT 9297
Query 212107 CCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCAC 212166
||||| || ||| |||||| || ||| | ||||| || | ||||| |||||||||
Sbjct 9298 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 9357
Query 212167 GGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTAT 212226
||||| | || || ||| | ||| | |||||||||| || || || |
Sbjct 9358 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAG 9417
Query 212227 GGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTC 212286
|||||||| || || |||||||||||||| |||||||| || ||||| || || || ||
Sbjct 9418 GGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTT 9477
Query 212287 GGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCTC 212346
||| || | |||||||| ||||| ||||||||| | ||||||||||||| |
Sbjct 9478 GGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTG 9537
Query 212347 GCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTC 212406
|| | |||||||| | | | ||||| || || | ||||| | || |||||||||
Sbjct 9538 GCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTC 9597
Query 212407 AACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCT 212466
||||||||||||||||| ||||||||||| || |||||| |||| ||| || |
Sbjct 9598 AACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAAT 9657
Query 212467 ACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAAT 212526
||||||| |||| | | ||| | || || |||||||||||||| ||||||||| | |||
Sbjct 9658 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 9717
Query 212527 GCACACAACTTCCCACTTGACTTAGC 212552
|| ||||||||||| || ||| ||||
Sbjct 9718 GCTCACAACTTCCCTCTAGACCTAGC 9743
>seq14178
Length=3042336
Score = 158 bits (174), Expect = 2e-33
Identities = 232/327 (71%), Gaps = 11/327 (3%)
Strand=Plus/Minus
Query 212227 GGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTC 212286
||||||| ||||| ||||| ||||| || ||||| ||||| ||||| | || || ||
Sbjct 2899413 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTACGGTTATTTT 2899354
Query 212287 GGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCTC 212346
|| || | |||||||| ||||| ||||||| | |||||| ||||||||
Sbjct 2899353 GGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTACATTTCTTCCTG 2899294
Query 212347 GCATCATGG-CCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATT 212405
|| | ||| ||||| | || | ||||| || || ||||||| |||| || || |
Sbjct 2899293 GCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAGCACTATAGCTTG 2899234
Query 212406 CAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCC 212465
|||||||||||| ||||| ||||||||||| | || |||| || ||
Sbjct 2899233 CAACCTAAATGGTTTCAATTTCAACCAATCTAT--------CA--AGGTCGTGTAATTAA 2899184
Query 212466 TACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAA 212525
||| |||| |||| || |||| | || ||||| |||| |||||||||||| ||| | ||
Sbjct 2899183 TACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATGCATGAACGTAA 2899124
Query 212526 TGCACACAACTTCCCACTTGACTTAGC 212552
| || |||||||| || ||| ||||
Sbjct 2899123 AGGTCATAACTTCCCTCTAGACCTAGC 2899097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807296782336000
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