Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq22333 533 2e-146 seq17466 367 2e-96 seq14178 158 2e-33 >seq22333 Length=1412734 Score = 533 bits (590), Expect = 2e-146 Identities = 684/943 (73%), Gaps = 0/943 (0%) Strand=Plus/Plus Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAGCTGCAACAACATGCTTTATCG 211669 ||||||||||||||||| | |||||||| | | | | ||||| | ||||| Sbjct 733263 TTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACTTCTGTATTTATTA 733322 Query 211670 TAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTT 211729 | || ||||| || || ||||| || ||||| ||||| || |||||||| || |||| | Sbjct 733323 TCGCCTTCATTGCTGCTCCTCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGAT 733382 Query 211730 CATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCG 211789 | | | ||||| ||||| || || |||||||| || |||| |||| || |||| Sbjct 733383 CTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATCG 733442 Query 211790 GTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTG 211849 |||| || || || || || |||||||| ||| | ||||||| ||| | |||||||| | Sbjct 733443 GTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCG 733502 Query 211850 GTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGAC 211909 ||||||| || | | | | |||||| | | || | | |||||||| | Sbjct 733503 GTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTG 733562 Query 211910 AGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCAC 211969 ||||||||||| | |||| | ||||||||||||||||| |||||| |||||||| | Sbjct 733563 AGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTC 733622 Query 211970 CTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAG 212029 |||| ||||||| ||||| ||| | | |||||| ||||||| || || || | Sbjct 733623 CTGTTGCAGCAGCGGCTGCTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTG 733682 Query 212030 ACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAAC 212089 | ||||||||| |||| || || || || |||||||||||| | |||||||| || || | Sbjct 733683 ATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGC 733742 Query 212090 ATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCAT 212149 | ||||||||||||||||||||||| ||| ||| || || ||| | ||||| || | Sbjct 733743 ACAACATCCTTATGCACCCATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCC 733802 Query 212150 TATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTT 212209 ||||| ||||||||| ||||| | || || ||| | ||| | |||||||| | Sbjct 733803 TATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAA 733862 Query 212210 TAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTG 212269 || || || | ||||||| ||||| ||||| ||||| || ||||| ||||| | Sbjct 733863 ATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAG 733922 Query 212270 CTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAA 212329 |||| || || || || || || | |||||||| ||||| |||||||| | Sbjct 733923 CTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTT 733982 Query 212330 GTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTA 212389 |||||| |||||||| || | |||||||| | || | ||||| || || | |||| Sbjct 733983 CTTTACATTTCTTCCTGGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTA 734042 Query 212390 TCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCAT 212449 | |||| ||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct 734043 TTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTC 734102 Query 212450 CAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAG 212509 |||| || || ||| |||| |||| || |||| | || |||||||||||||||| Sbjct 734103 AAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAG 734162 Query 212510 TTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 ||||||| ||| | ||||| || |||||||| || ||| |||| Sbjct 734163 TTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 734205 Score = 228 bits (252), Expect = 1e-54 Identities = 311/433 (72%), Gaps = 1/433 (0%) Strand=Plus/Plus Query 212121 AGGTGTT-GCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCACGGTTCTCTTGTTA 212179 || |||| || ||| | ||||| || | ||||| ||||||||| ||||| | || | Sbjct 732395 AGCTGTTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAA 732454 Query 212180 CATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTATGGTTACAAGTTCG 212239 | ||| | ||| | |||||||| | | || || | ||||||| |||| Sbjct 732455 CCTCTAATTTGATCAGGGAAACCACAGAAAATAAATCTGCTAATGAAGGTTACAGATTCG 732514 Query 212240 GACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTCGGTAGACTTATCT 212299 | ||||| ||||| || ||||| ||||| ||||| || || || || || || | |||| Sbjct 732515 GTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGGCCGATTGATCT 732574 Query 212300 TCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCTCGCATCATGGCCTG 212359 |||| ||||| |||||||| | |||||| |||||||| || | ||||||| Sbjct 732575 TCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGCTGCTTGGCCTG 732634 Query 212360 TTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACCTAAATGGAT 212419 | | || | ||||| || || | ||||| |||| ||||| |||||||||||||| | Sbjct 732635 TAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTT 732694 Query 212420 TCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCTACTTGGGGTGATG 212479 |||| ||||||||||| || |||||| |||| || || ||| |||| |||| Sbjct 732695 TCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATA 732754 Query 212480 TTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAATGCACACAACTTCC 212539 || |||| | || ||||||||||||||||||||||| ||| | ||||| || ||||||| Sbjct 732755 TTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCC 732814 Query 212540 CACTTGACTTAGC 212552 | || ||| |||| Sbjct 732815 CTCTAGACCTAGC 732827 >seq17466 Length=9900 Score = 367 bits (406), Expect = 2e-96 Identities = 421/566 (74%), Gaps = 0/566 (0%) Strand=Plus/Plus Query 211987 GCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGGT 212046 ||||| ||| | |||| || | ||||| || ||||| || |||||||||||||| Sbjct 9178 GCTGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 9237 Query 212047 ATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAACATAACATCCTTATGCAC 212106 ||||| || || |||||||| ||| | |||||||| || || || |||||||||||||| Sbjct 9238 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCAT 9297 Query 212107 CCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCAC 212166 ||||| || ||| |||||| || ||| | ||||| || | ||||| ||||||||| Sbjct 9298 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 9357 Query 212167 GGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTAT 212226 ||||| | || || ||| | ||| | |||||||||| || || || | Sbjct 9358 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAG 9417 Query 212227 GGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTC 212286 |||||||| || || |||||||||||||| |||||||| || ||||| || || || || Sbjct 9418 GGTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTT 9477 Query 212287 GGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCTC 212346 ||| || | |||||||| ||||| ||||||||| | ||||||||||||| | Sbjct 9478 GGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTG 9537 Query 212347 GCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTC 212406 || | |||||||| | | | ||||| || || | ||||| | || ||||||||| Sbjct 9538 GCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTC 9597 Query 212407 AACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCT 212466 ||||||||||||||||| ||||||||||| || |||||| |||| ||| || | Sbjct 9598 AACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAAT 9657 Query 212467 ACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAAT 212526 ||||||| |||| | | ||| | || || |||||||||||||| ||||||||| | ||| Sbjct 9658 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 9717 Query 212527 GCACACAACTTCCCACTTGACTTAGC 212552 || ||||||||||| || ||| |||| Sbjct 9718 GCTCACAACTTCCCTCTAGACCTAGC 9743 >seq14178 Length=3042336 Score = 158 bits (174), Expect = 2e-33 Identities = 232/327 (71%), Gaps = 11/327 (3%) Strand=Plus/Minus Query 212227 GGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTC 212286 ||||||| ||||| ||||| ||||| || ||||| ||||| ||||| | || || || Sbjct 2899413 GGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTTACGGTTATTTT 2899354 Query 212287 GGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTTCCTC 212346 || || | |||||||| ||||| ||||||| | |||||| |||||||| Sbjct 2899353 GGCTGATTGATCTTCCAATATGCTAGTGTCAACAATTCTCGTTCTTTACATTTCTTCCTG 2899294 Query 212347 GCATCATGG-CCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATT 212405 || | ||| ||||| | || | ||||| || || ||||||| |||| || || | Sbjct 2899293 GCTGCTTGGGCCTGTAGTAGGTATCTGGTTCACTGCTTTGGGTATTAGCACTATAGCTTG 2899234 Query 212406 CAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCC 212465 |||||||||||| ||||| ||||||||||| | || |||| || || Sbjct 2899233 CAACCTAAATGGTTTCAATTTCAACCAATCTAT--------CA--AGGTCGTGTAATTAA 2899184 Query 212466 TACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAA 212525 ||| |||| |||| || |||| | || ||||| |||| |||||||||||| ||| | || Sbjct 2899183 TACCTGGGCTGATATTATTAATCGTGCTAACCTCGGTACGGAAGTTATGCATGAACGTAA 2899124 Query 212526 TGCACACAACTTCCCACTTGACTTAGC 212552 | || |||||||| || ||| |||| Sbjct 2899123 AGGTCATAACTTCCCTCTAGACCTAGC 2899097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807296782336000