Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq18882 145 9e-30
seq20901 141 1e-28
seq22035 93.3 5e-14
>seq18882
Length=869960
Score = 145 bits (160), Expect = 9e-30
Identities = 407/618 (66%), Gaps = 10/618 (2%)
Strand=Plus/Plus
Query 33293 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 33352
|| ||| || || || ||||||||||| |||||||| |||| || | ||||| |
Sbjct 814212 TATACAACAGGCACGCAAAATCGCAGTGGAGACCCTCATCTCGCGAGATCAACTCGTTTG 814271
Query 33353 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT- 33411
| || || | ||| ||||||| || |||||||| ||||||||||| | || || |
Sbjct 814272 AGAATGTTAATCCCGGCATTAACCCTCGCTTTTTGAGCCAAAATATCG-CGCAAAAACTC 814330
Query 33412 CCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA---CCG 33468
|| || ||||| || || || || |||||| || || | |||||| | || |
Sbjct 814331 CCTGAGAAGAAAATCCCCTCCACGCAAGCAAACGCGATTAATCTCTCGGCGAAAGTCTCC 814390
Query 33469 GCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 33528
| || ||| ||||| ||| ||||| ||| |||||| || || || | ||||
Sbjct 814391 GAGCCGTC---GATCCAATTTAACGCCCACGTGGCTTTCTTTGCGACGCAGGGAACCGTT 814447
Query 33529 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 33588
|| ||||| | ||||||| || ||||| | | ||| | ||||| || | |
Sbjct 814448 TCGATGGCGTGAAAGAGACGATTCTTTTCGTCGGAGTTTTTGATGTAAGTTTCTAGAAGC 814507
Query 33589 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33648
|| |||||||| || || ||||| |||||||| || || || |||||||| |
Sbjct 814508 AGCGAGTACATTTCGGAGTGGATGTTCTCAATGGCGATTTGGAAGCCGTAGAAGGCACGC 814567
Query 33649 GCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCC-GCCAAATTTTCATTCACTATTCC 33707
||||||| | ||| || || || || | | | || || | || || || || ||
Sbjct 814568 GCCTCGGCGACCTGGACCTCCGT-CATGAACCTGCCGGCGAGGTTCTCGAGGACGATGCC 814626
Query 33708 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG 33767
||| ||| || || || || | || || | | || | || ||||| | |||||
Sbjct 814627 GTCGGAGGCGGCGAAGAAGGCGAGCACGTGCGTGACGAAGTGCTTCTCGTCAGCGGTTAG 814686
Query 33768 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 33827
| ||| | || ||||| || | ||| ||||| || | |||||||| || ||
Sbjct 814687 GGCCTCCCAGTGGCGGAGATCTTGCGAAAGATCAACTTCCTCAGCGGTCCAAAACGACGC 814746
Query 33828 CTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887
|| || || || ||||| | ||| || | || || || ||||| ||| |||||
Sbjct 814747 TTCGGCTTTCTTGTACATTTCCCAAATTTGTGGGTACTGAATCGGGAACATACAAAATCG 814806
Query 33888 ATTTGGATTTGGTGCAAG 33905
|| |||||||| || ||
Sbjct 814807 ATCGGGATTTGGGGCTAG 814824
>seq20901
Length=225483
Score = 141 bits (156), Expect = 1e-28
Identities = 388/588 (66%), Gaps = 10/588 (2%)
Strand=Plus/Plus
Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355
||| ||| || |||||||||||||| || || ||||||| ||||| ||||| || |
Sbjct 70606 ACAACAAGCACGCGAAATCGCAGTGGAGTCCTTCGTCTCGCGAGATTAGCTCGTTTGAGA 70665
Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415
| || || || ||||||| || |||||||| | ||||||||| | ||| || |
Sbjct 70666 AGGTTAGCCCCGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCGCAGAAACTGCCCG 70725
Query 33416 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGCGC 33472
| || || || ||||| || |||||| || || |||||||| | || | | | ||
Sbjct 70726 AGAAAAATATCCCTTCCACGCAAGCAAACGCTATCAGTCTCTCCGCGAATGTCTCCGAGC 70785
Query 33473 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33532
||| ||||| ||| | |||||||||||||| | || || |||| |||||| |
Sbjct 70786 CGTC---GATCCAATTTAGGGCCCAATCGGCCTTTCTGGCAACGCACGGCACCGTTTCAA 70842
Query 33533 TGGCATTAAAGAGATAGtttttttCAT--TACTATCTTTAACATAAGTATCGATCAAAAG 33590
||| ||| | | | ||||| | | | ||||| | || || || | | ||
Sbjct 70843 AGGCGCGAAATAAGCGGCTCTTTTCGTCGGAGT-TCTTT-ATGTACGTTTCTAGAAGGAG 70900
Query 33591 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 33650
|||||||| || || ||||| || ||||| || || || |||||||| | ||
Sbjct 70901 CGAGTACATTTCGGAGTGGATGTTCTCGATGGCGATTTGGAAGCCGTAGAAGGCACGCGC 70960
Query 33651 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTC 33710
||||| | || |||||| | || | | || | ||||| || ||||| ||
Sbjct 70961 CTCGGAGACTTGGACTTCTTTCATGAACCTGGCAGCGAGGTTTTCGAGGACGATTCCATC 71020
Query 33711 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTT 33770
||| || || || || | || || | || || | ||| ||||| | |||||
Sbjct 71021 CGAGGCGGCGAAGAAGGCGAGCACGTGAGTGATGAAGTGTTTCTCGTCGGCGGTTAGGGA 71080
Query 33771 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTC 33830
| ||| | ||| || | || | || || || ||| | ||||||||||| || ||
Sbjct 71081 TTCCCACTGGCGGATGTCCTGCGACAGGTCGACCTCCTCCGCCGTCCAAAATGAAGCTTC 71140
Query 33831 TGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAAT 33878
|| || || ||||| | |||||| || || |||||||| || ||
Sbjct 71141 GGCTTTCTTGTACATTTCCCAGATTTCCGGGTACTGGATTGGAAACAT 71188
>seq22035
Length=61329
Score = 93.3 bits (102), Expect = 5e-14
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 63612 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63671
||||| |||||||| | || ||||| || || ||||||||| || ||| | | || |
Sbjct 16980 GTTCCAGCATTAAAAAGTGTGGGAGATGCATGGGTAAACCATCGTTGAGACATCATATGG 16921
Query 63672 TACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 63730
|| || | ||||| || || || || | ||| || | || || || || | ||| ||
Sbjct 16920 TATGTTTTGATAGCAGAATCAATGTCATCCTTG-TGCAACCCAACAGCAACCCTCATCAA 16862
Query 63731 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTT-TATTTTCAACAAGTAGGATTTTTCCA 63789
||| || ||||||||||| || | ||| | || | ||||| | |||||| | ||||
Sbjct 16861 CATATGTTGAGGTCTTTCTAC-AACTTTTCCTTGGACCTTCAAGAGGTAGGACCTCTCCA 16803
Query 63790 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
||||| || |||||||| | || ||| || || ||||| |||||
Sbjct 16802 GGGTTTTGAAGCCAAAATAATCATAGTCAAAATCCCGATCGTAGATAAT 16754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622747856896000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |