Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq5785 111 2e-19
seq4300 98.7 1e-15
seq25300 89.7 5e-13
seq23635 82.4 7e-11
>seq5785
Length=266748
Score = 111 bits (122), Expect = 2e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | |||||||| || | ||||||||| | |||||| | || | ||| |
Sbjct 168028 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAAACTATCACCCTTGAGGTGGAAAGCTCC 167969
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | |||||| |||||| ||||| ||||| || || || || ||
Sbjct 167968 GACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAG 167909
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||||| || |||| | ||||||||||| || |||| | | | | ||||||||||
Sbjct 167908 CAAAGGCTTATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACCCTTGCCGACTATAAC 167849
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
||||| || || || || |||| |||||||| | || || || ||||
Sbjct 167848 ATTCAGAAGGAGTCCACACTCCACCTGGTCCTCCGTCTAAGGGGTGGAA 167800
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| ||||| | || |||||| | ||||| | || |||||
Sbjct 171450 ATGCAGATTTTTGTGAAAACCCTCACGGGAAAAACAATCACTCTTGAGGTAGAAAGCTCT 171391
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | || ||| || ||| ||||| || || || || || |||||
Sbjct 171390 GACACCATTGACAATGTGAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAG 171331
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || ||||||| | || || || || ||||||| || | | |||||||||
Sbjct 171330 CAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAAC 171271
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| |||||||| ||| |||| |||| ||
Sbjct 171270 ATTCAGAAAGAATCCACTCTCCACTTGGTTCT 171239
>seq4300
Length=903212
Score = 98.7 bits (108), Expect = 1e-15
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || || ||||| |||| || ||| | ||||| ||||| | ||
Sbjct 755441 CAATATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACAATCACTCTCGAAGTGGAGAG 755500
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
||||||||||| | ||||| ||||| ||||| || ||||| ||||| ||
Sbjct 755501 CTCTGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGA 755560
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||| || | || || | || ||| || ||||||||||||| | | | | ||| ||
Sbjct 755561 TCAGCAGCGTCTTATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTA 755620
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986
||||| ||||||||||| || | ||||| ||||| || ||
Sbjct 755621 CAACATCCAAAAAGAATCCACCTTGCATCTTGTCCTCAGGCT 755662
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| ||||| | ||||| ||||| | || || || | |||||| ||||| | ||
Sbjct 850355 AAGATGCAGATATTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAAGTGGAGAGC 850414
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|||||||||||| | ||||| ||||| ||||| || || || || || ||
Sbjct 850415 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGAC 850474
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| || | ||||| | | ||| || ||||||||||| | | | | ||| ||
Sbjct 850475 CAGCAGCGTCTCATCTTTGCCGGGAAGCAACTCGAAGACGGCCGCACTTTGGCCGATTAC 850534
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
||||||||||||||||| ||| | ||||| ||||| || ||| | || ||||
Sbjct 850535 AACATTCAAAAAGAATCCACTTTGCATCTTGTCCTCAGGCTTCGTGGTGGAA 850586
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| |||| || || |||| ||| |||| | || |
Sbjct 817936 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCC 817995
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| ||||| | || || ||||| ||||| ||||| || |||||||| ||
Sbjct 817996 GACACGATCGATAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCCGACCAG 818055
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || || || | || ||| || ||||||||||| | | | | | ||| || |||
Sbjct 818056 CAGAGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGCACCTTGGCCGATTACAAC 818115
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986
|| |||||||| || || ||||||||||||| || ||
Sbjct 818116 ATCCAAAAAGAGTCCACCCTCCATCTGGTCCTCAGGCT 818153
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
|||||| ||||| | || || |||||| |||||||| ||||| ||||| || ||
Sbjct 191832 CGACACGATCGACAACGTGAAGGCGAAGATTCAGGACAAAGAGGGGATTCCTCCGGACCA 191891
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
|| || ||||| | || |||||| || ||||| |||| | | || ||| || ||
Sbjct 191892 GCAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCGCCGATTACAA 191951
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||||||| || || ||| |||| || |||||
Sbjct 191952 CATTCAAAAGGAGTCCACTCTCCACCTTGTCCT 191984
>seq25300
Length=5305897
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| |||| ||||| | || ||| | || | ||||||
Sbjct 1946317 ATGCAGATCTTCGTGAAAACCCTAACGGGAAAGACTATAACCCTAGAGGTCGAATCATCG 1946376
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| ||||| ||||| || ||||| || || || |||
Sbjct 1946377 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATTCCACCGGACCAA 1946436
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947
|| | ||||| | || ||| || || || || || | |||| | | ||| ||||| ||
Sbjct 1946437 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCAGAACCCT-AGCTGACTACAA 1946495
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||| ||||| || || || |||| || |||||
Sbjct 1946496 CATCCAAAAGGAGTCAACACTCCACCTCGTCCT 1946528
>seq23635
Length=3246295
Score = 82.4 bits (90), Expect = 7e-11
Identities = 102/137 (74%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921
||||| ||||| || ||||| ||||| || ||| | |||| | || ||||| | |||
Sbjct 165632 GACAAGGAAGGCATTCCTCCGGATCAGCAGAGATTGATTTTTGCTGGTAAACAGTTGGAA 165691
Query 26922 GATGATAGAAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||| |||| || || || |||||||||||||| || || || | || |||||||
Sbjct 165692 GATGGCAGAA-CGCTTGCAGATTATAACATTCAAAAGGAGTCGACACTTCACTTGGTCCT 165750
Query 26981 GAGACTTAGAGGAGGAA 26997
||| || || |||||||
Sbjct 165751 GAGGCTGAGGGGAGGAA 165767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478509228032000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |