Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq5785 111 2e-19 seq4300 98.7 1e-15 seq25300 89.7 5e-13 seq23635 82.4 7e-11 >seq5785 Length=266748 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | |||||||| || | ||||||||| | |||||| | || | ||| | Sbjct 168028 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAAACTATCACCCTTGAGGTGGAAAGCTCC 167969 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| |||||| ||||| ||||| || || || || || Sbjct 167968 GACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAG 167909 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||| || |||| | ||||||||||| || |||| | | | | |||||||||| Sbjct 167908 CAAAGGCTTATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACCCTTGCCGACTATAAC 167849 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||| || || || || |||| |||||||| | || || || |||| Sbjct 167848 ATTCAGAAGGAGTCCACACTCCACCTGGTCCTCCGTCTAAGGGGTGGAA 167800 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | || |||||| | ||||| | || ||||| Sbjct 171450 ATGCAGATTTTTGTGAAAACCCTCACGGGAAAAACAATCACTCTTGAGGTAGAAAGCTCT 171391 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | || ||| || ||| ||||| || || || || || ||||| Sbjct 171390 GACACCATTGACAATGTGAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAG 171331 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || ||||||| | || || || || ||||||| || | | ||||||||| Sbjct 171330 CAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAAC 171271 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| |||||||| ||| |||| |||| || Sbjct 171270 ATTCAGAAAGAATCCACTCTCCACTTGGTTCT 171239 >seq4300 Length=903212 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || ||||| |||| || ||| | ||||| ||||| | || Sbjct 755441 CAATATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACAATCACTCTCGAAGTGGAGAG 755500 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 ||||||||||| | ||||| ||||| ||||| || ||||| ||||| || Sbjct 755501 CTCTGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGA 755560 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || | || || | || ||| || ||||||||||||| | | | | ||| || Sbjct 755561 TCAGCAGCGTCTTATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTA 755620 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 ||||| ||||||||||| || | ||||| ||||| || || Sbjct 755621 CAACATCCAAAAAGAATCCACCTTGCATCTTGTCCTCAGGCT 755662 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | ||||| ||||| | || || || | |||||| ||||| | || Sbjct 850355 AAGATGCAGATATTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAAGTGGAGAGC 850414 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||||||| | ||||| ||||| ||||| || || || || || || Sbjct 850415 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGAC 850474 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || | ||||| | | ||| || ||||||||||| | | | | ||| || Sbjct 850475 CAGCAGCGTCTCATCTTTGCCGGGAAGCAACTCGAAGACGGCCGCACTTTGGCCGATTAC 850534 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||||||||||||||| ||| | ||||| ||||| || ||| | || |||| Sbjct 850535 AACATTCAAAAAGAATCCACTTTGCATCTTGTCCTCAGGCTTCGTGGTGGAA 850586 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| |||| || || |||| ||| |||| | || | Sbjct 817936 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCC 817995 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| ||||| | || || ||||| ||||| ||||| || |||||||| || Sbjct 817996 GACACGATCGATAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCCGACCAG 818055 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || || | || ||| || ||||||||||| | | | | | ||| || ||| Sbjct 818056 CAGAGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGCACCTTGGCCGATTACAAC 818115 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 || |||||||| || || ||||||||||||| || || Sbjct 818116 ATCCAAAAAGAGTCCACCCTCCATCTGGTCCTCAGGCT 818153 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||| ||||| | || || |||||| |||||||| ||||| ||||| || || Sbjct 191832 CGACACGATCGACAACGTGAAGGCGAAGATTCAGGACAAAGAGGGGATTCCTCCGGACCA 191891 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || || ||||| | || |||||| || ||||| |||| | | || ||| || || Sbjct 191892 GCAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCGCCGATTACAA 191951 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||||| || || ||| |||| || ||||| Sbjct 191952 CATTCAAAAGGAGTCCACTCTCCACCTTGTCCT 191984 >seq25300 Length=5305897 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| |||| ||||| | || ||| | || | |||||| Sbjct 1946317 ATGCAGATCTTCGTGAAAACCCTAACGGGAAAGACTATAACCCTAGAGGTCGAATCATCG 1946376 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||| ||||| || ||||| || || || ||| Sbjct 1946377 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGGATTCCACCGGACCAA 1946436 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 || | ||||| | || ||| || || || || || | |||| | | ||| ||||| || Sbjct 1946437 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGCAGAACCCT-AGCTGACTACAA 1946495 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||| ||||| || || || |||| || ||||| Sbjct 1946496 CATCCAAAAGGAGTCAACACTCCACCTCGTCCT 1946528 >seq23635 Length=3246295 Score = 82.4 bits (90), Expect = 7e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 ||||| ||||| || ||||| ||||| || ||| | |||| | || ||||| | ||| Sbjct 165632 GACAAGGAAGGCATTCCTCCGGATCAGCAGAGATTGATTTTTGCTGGTAAACAGTTGGAA 165691 Query 26922 GATGATAGAAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||| |||| || || || |||||||||||||| || || || | || ||||||| Sbjct 165692 GATGGCAGAA-CGCTTGCAGATTATAACATTCAAAAGGAGTCGACACTTCACTTGGTCCT 165750 Query 26981 GAGACTTAGAGGAGGAA 26997 ||| || || ||||||| Sbjct 165751 GAGGCTGAGGGGAGGAA 165767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478509228032000