Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq4300 116 3e-21 seq23635 96.9 3e-15 seq3274 93.3 4e-14 seq5785 87.8 2e-12 >seq4300 Length=903212 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| |||| || || |||||||| |||| |||||| | | Sbjct 817936 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCC 817995 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| ||||| ||||| || |||||||| || Sbjct 817996 GACACGATCGATAACGTGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCTCCCGACCAG 818055 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | || ||| |||||||||||||| | | | | | | |||||| ||| Sbjct 818056 CAGAGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGCACCTTGGCCGATTACAAC 818115 Query 24171 ATTCAAAAAGAATCTAC 24187 || |||||||| || || Sbjct 818116 ATCCAAAAAGAGTCCAC 818132 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | || || ||||| |||| || ||| | || || ||||||| ||| Sbjct 755441 CAATATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACAATCACTCTCGAAGTGGAGAG 755500 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | ||||||||||| | ||||| ||||| ||||| || || || ||||| || Sbjct 755501 CTCTGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGA 755560 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||| ||| | || || | || ||| |||||||||||||||| | | | | | |||||| Sbjct 755561 TCAGCAGCGTCTTATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTA 755620 Query 24167 TAACATTCAAAAAGAATCTAC 24187 ||||| ||||||||||| || Sbjct 755621 CAACATCCAAAAAGAATCCAC 755641 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | || || ||||| |||| || ||| |||| || ||||||| ||| Sbjct 817704 CAATATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACGATCACTCTCGAAGTGGAGAG 817763 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | ||||||||||| | ||||| ||||| ||||| || || || ||||| || Sbjct 817764 CTCTGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGA 817823 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||| ||| | || || | || ||| |||||||||||||||| | | | | | ||||| Sbjct 817824 TCAGCAGCGTCTTATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCTGATTA 817883 Query 24167 TAACATTCAAAAAGAATCTAC 24187 ||||| || || || || || Sbjct 817884 CAACATCCAGAAGGAGTCAAC 817904 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | ||||| ||||| | || || || | || ||| ||||||| ||| | Sbjct 850355 AAGATGCAGATATTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAAGTGGAGAGC 850414 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | ||||| ||||| ||||| || || || || || || Sbjct 850415 TCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGAC 850474 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| | || || | | ||| |||||||||||||| | | | | | |||||| Sbjct 850475 CAGCAGCGTCTCATCTTTGCCGGGAAGCAACTCGAAGACGGCCGCACTTTGGCCGATTAC 850534 Query 24168 AACATTCAAAAAGAATCTAC 24187 ||||||||||||||||| || Sbjct 850535 AACATTCAAAAAGAATCCAC 850554 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || || || || || |||| || | || || ||| | Sbjct 191772 AATGCAGATCTTCGTCAAGACGTTGACCGGGAAGACGATCACTCTGGAGGTGGAGAGCTC 191831 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||| ||||| | || || |||||| |||||||| || || ||||| || || Sbjct 191832 CGACACGATCGACAACGTGAAGGCGAAGATTCAGGACAAAGAGGGGATTCCTCCGGACCA 191891 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||| || || | || ||||||||| ||||| |||| | | | || |||||| || Sbjct 191892 GCAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCGCCGATTACAA 191951 Query 24170 CATTCAAAAAGAATCTAC 24187 ||||||||| || || || Sbjct 191952 CATTCAAAAGGAGTCCAC 191969 >seq23635 Length=3246295 Score = 96.9 bits (106), Expect = 3e-15 Identities = 110/144 (76%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 ||||| |||||||| ||||| ||||| |||||| |||||| | || || || | ||| Sbjct 165632 GACAAGGAAGGCATTCCTCCGGATCAGCAGAGATTGATTTTTGCTGGTAAACAGTTGGAA 165691 Query 24144 GATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||| ||||| || || ||||||||||||||||| || || ||| |||| || || | Sbjct 165692 GATGGCAGAA-CGCTTGCAGATTATAACATTCAAAAGGAGTCGACACTTCACTTGGTCCT 165750 Query 24203 AAGATTGAGAGGAGG-ACTATAAT 24225 || |||| ||||| ||||| || Sbjct 165751 GAGGCTGAGGGGAGGAACTATGAT 165774 >seq3274 Length=969234 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 |||||||| | || || ||||| |||| || || | |||||| ||||||||||| Sbjct 909887 AAAATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATTACCCTCGAAGTCGAGAGT 909946 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||| ||||| | ||||| ||||| ||||| ||||| || || || || Sbjct 909947 TCCGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGAC 910006 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||||| ||||| | || || ||||||||||| || | | | | | | ||||| Sbjct 910007 CAGCAGAGGCTGATCTTCGCTGGAAAGCAACTCGAGGACGGCCGCACCTTGGCTGATTAC 910066 Query 24168 AACATTCAAAAAGAATCTACAATTCA 24193 || || ||||| || || || |||| Sbjct 910067 AATATCCAAAAGGAGTCGACGCTTCA 910092 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| |||| ||||| | |||||| ||||||||||| | | Sbjct 910118 ATGCAGATATTCGTCAAAACCCTAACGGGAAAGACAATTACCCTCGAAGTCGAGAGCTCC 910177 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| ||||| ||||| ||||| || || || || || Sbjct 910178 GACACGATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAG 910237 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||| ||||||||||| || | | | | | | ||||| || Sbjct 910238 CAGAGGCTGATCTTTGCCGGAAAGCAACTCGAGGACGGCCGCACCTTGGCTGATTACAAT 910297 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || || ||||| || |||| Sbjct 910298 ATCCAGAAGGAATCAACTCTTCA 910320 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| |||| || || |||| ||| | || || || | | Sbjct 910346 ATGCAGATATTCGTTAAAACCCTAACGGGTAAGACGATCACCCTTGAGGTTGAAAGCTCC 910405 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || ||||| | || || |||||| || || ||||| || ||||| ||||| Sbjct 910406 GATACTATCGACAATGTTAAGGCCAAGATTCAAGATAAGGAAGGGATTCCTCCTGATCAG 910465 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||| ||||| || ||||||| | | | | |||||||||| Sbjct 910466 CAGCGTCTGATCTTCGCCGGGAAGCAGCTTGAAGATGGCCGTACTCTGGCCGATTATAAC 910525 Query 24171 ATTCAAAAAGAATCTAC 24187 || || |||||||| || Sbjct 910526 ATCCAGAAAGAATCAAC 910542 >seq5785 Length=266748 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | |||||||| || | ||||||||| | || ||| | || || || | | Sbjct 168028 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAAACTATCACCCTTGAGGTGGAAAGCTCC 167969 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | |||||| |||||| ||||| ||||| || || || || || Sbjct 167968 GACACTATTGACAATGTCAAAGCCAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAG 167909 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || || || |||| | ||||| ||||| || |||| | | | | | ||| |||||| Sbjct 167908 CAAAGGCTTATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACCCTTGCCGACTATAAC 167849 Query 24171 ATTCAAAAAGAATCTACA 24188 ||||| || || || ||| Sbjct 167848 ATTCAGAAGGAGTCCACA 167831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429801859968000