Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq5785 107 2e-18 seq23635 87.8 2e-12 >seq5785 Length=266748 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || ||||| |||||||| || ||| | || ||| | | Sbjct 168028 ATGCAGATCTTTGTAAAGACCCTCACTGGAAAAACTATCACCCTTGAGGTGGAAAGCTCC 167969 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || ||| || ||| || || ||||| |||| || || Sbjct 167968 GACACTATTG-ACAATGTCAAAGCCAAGATTCAGGACAAGGAAGGAATCCCACCAGACCA 167910 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| ||||||| ||| ||||||||| | || |||| | ||| | ||||| ||||| Sbjct 167909 GCAAAGGCTTATTTTTGCTGGCAAACAACTTGAGGATGGCCGCACCCTTGCCGACTATAA 167850 Query 115465 CATTCAAAAAGAGTCTAC 115482 |||||| || ||||| || Sbjct 167849 CATTCAGAAGGAGTCCAC 167832 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAA--ACGGAGTCCA 115343 |||||||||||||| || || ||||| |||||||| || || | || | |||| | Sbjct 165843 ATGCAAATTTTTGTGAAGACTCTCACTGGAAAAACAATCACTCTGGAGGTAGAGAGTTCG 165784 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 | |||| ||| | || || || || ||||| |||||| | || |||| Sbjct 165783 G--ACACCATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCAGATC 165726 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || | |||| ||| ||||| || | ||||||| | ||| | || || || | Sbjct 165725 AGCAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAAGATGGGAGGACCCTTGCAGACTACA 165666 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||| || || || || | ||| ||||||||||| |||| ||||||| Sbjct 165665 ACATTCAGAAGGAATCCACATTGCATTTGGTGTTGAGACTGCGTGGAGGAA 165615 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| ||||| |||||||||||||| || || | || || | Sbjct 171450 ATGCAGATTTTTGTGAAAACCCTCACGGGAAAAACAATCACTCTTGAGGTAGAAAGCTCT 171391 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || ||| |||||| || || || || |||| ||||| Sbjct 171390 GACACCATTG-ACAATGTGAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCAGATCA 171332 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || || |||| ||| || || || | ||||||| | || | || || ||||| Sbjct 171331 GCAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAA 171272 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 |||||| ||||| || ||| | || |||| Sbjct 171271 CATTCAGAAAGAATCCACTCTCCACTTGGT 171242 >seq23635 Length=3246295 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 || || |||||| | || |||||||| ||| | |||| ||| || ||||| || ||| Sbjct 165632 GACAAGGAAGGCATTCCTCCGGATCAGCAGAGATTGATTTTTGCTGGTAAACAGTTGGAA 165691 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| || ||| | || ||||||||||||||||| ||||| || | || |||| || Sbjct 165692 GATGGCAGAACGCTTGCAGATTATAACATTCAAAAGGAGTCGACACTTCACTTGGTCCTG 165751 Query 115499 AGATTGCGAGGAGGAA 115514 || || | ||||||| Sbjct 165752 AGGCTGAGGGGAGGAA 165767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425211292672000