Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03]
25,600 sequences; 315,806,082 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq25300 134 3e-26
seq23040 93.3 9e-14
seq22724 93.3 9e-14
seq20935 93.3 9e-14
seq3662 93.3 9e-14
seq20749 91.5 3e-13
seq19350 91.5 3e-13
seq4655 91.5 3e-13
seq3307 87.8 4e-12
>seq25300
Length=5305897
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 218582 TGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACC 218641
|||| || ||||| |||||| || | || ||||| || | | |||||| | |||
Sbjct 4956459 TGGTTGACGGCCTGAAGCCAGGCCAAAGGAAAATCCTTTTCTGCTCTTTCAAGAGAAACT 4956400
Query 218642 TGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACC 218701
| || ||||| || || |||||||| ||||||||||| ||||| ||||| || |
Sbjct 4956399 TTGTCAAAGAAGCGAAAGTTGCTCAGTTCTCTGGTTATGTTTCCGAGCATTCTGCTTATC 4956340
Query 218702 ATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCA 218761
||||||||||||| ||||| | |||| |||| ||||||||||| | ||||||||
Sbjct 4956339 ATCACGGTGAGCAAAGTCTTGCCAGCACCATCTTAGGTATGGCACAGGATTTTGTGGGCA 4956280
Query 218762 GTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGT 218808
| |||||||| ||| | || | || || || || ||||| |||||
Sbjct 4956279 GCAACAACATTAACCTTCTTCAGCCTAATGGCCAATTTGGCACTCGT 4956233
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 734060 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 734119
Query 142563 CCCCAC 142568
||||||
Sbjct 734120 CCCCAC 734125
>seq23040
Length=7163423
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 4550446 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 4550387
Query 142563 CCCCAC 142568
||||||
Sbjct 4550386 CCCCAC 4550381
>seq22724
Length=404016
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 22704 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 22763
Query 142563 CCCCAC 142568
||||||
Sbjct 22764 CCCCAC 22769
>seq20935
Length=1615929
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 520628 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 520569
Query 142563 CCCCAC 142568
||||||
Sbjct 520568 CCCCAC 520563
>seq3662
Length=1964220
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 791668 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 791609
Query 142563 CCCCAC 142568
||||||
Sbjct 791608 CCCCAC 791603
>seq20749
Length=2021024
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 1639317 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1639258
Query 142564 CCCAC 142568
|||||
Sbjct 1639257 CCCAC 1639253
>seq19350
Length=1202040
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 644572 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 644513
Query 142564 CCCAC 142568
|||||
Sbjct 644512 CCCAC 644508
>seq4655
Length=957841
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 755430 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 755371
Query 142564 CCCAC 142568
|||||
Sbjct 755370 CCCAC 755366
>seq3307
Length=987958
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| ||||||||||||| |||||| || ||||||| || |||||||||||||||||
Sbjct 657449 AGCCCGTCTAGCTCAGTCGGTTGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 657390
Query 142563 CCCCAC 142568
||||||
Sbjct 657389 CCCCAC 657384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027499669529600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |