Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atalantia_20buxifolia_20[genbank_20GCA_5F002013935.1_202017-03-03] 25,600 sequences; 315,806,082 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq5785 93.3 3e-14 >seq5785 Length=266748 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | || || | || || || ||||| ||| | || |||| | | Sbjct 171906 ATGCAAATCTTTGTAAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCG 171847 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || |||| |||||| ||||| || || | || | |||| Sbjct 171846 GACACCATTGACAATGTTAAAGCCAAAATTCAGGATAAGGAAGGGATCCCACCAGACCAG 171787 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || || || |||||||||||||||||||| || ||| | || | || || ||||| Sbjct 171786 CAAAGGCTCATCTTTGCTGGCAAACAACTTGAGGATGGACGCACACTTGCAGACTACAAC 171727 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGT 22049 || ||||||||||| || |||||| ||||| | ||| Sbjct 171726 ATCCAGAAGGAATCAACCCTTCATTTGGTACTTCGT 171691 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || ||| | ||||| | || || ||||| || ||| ||||| || | Sbjct 166528 AATGCAGATCTTTGTGAAAACTCTCACTGGTAAAACTATCACCTTGGAAGTTGAGAGTTC 166469 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAA 21949 || || | | | || | ||| |||||| ||||| ||||| | ||||| | Sbjct 166468 TGATACAATTGACAATGTCAAGGCTAAAATTCAGGATAAGGAGGGCATCCCACCTG---A 166412 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||| |||||||| || |||||||| || || ||||||||| || | || || || Sbjct 166411 CCAGCAGAGACTGATTTTTGCTGGAAAGCAGCTAGAAGATGGTCGTACCCTTGCTGACTA 166352 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| ||||||||||||||||| ||||| |||| | ||| | || || || Sbjct 166351 CAACATTCAGAAGGAATCTACCCTTCACTTGGTGCTTCGTCTTCGTGGTGG 166301 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || ||| | ||||| | || || ||||| || ||| ||||| || | Sbjct 167801 AATGCAGATCTTTGTGAAAACTCTCACTGGTAAAACTATCACCTTGGAAGTTGAGAGTTC 167742 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAA 21949 || || | | | || | ||| |||||| ||||| ||||| | ||||| | Sbjct 167741 TGATACAATTGACAATGTCAAGGCTAAAATTCAGGATAAGGAGGGCATCCCACCTG---A 167685 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||| |||||||| || |||||||| || || ||||||||| || | || || || Sbjct 167684 CCAGCAGAGACTGATTTTTGCTGGAAAGCAGCTAGAAGATGGTCGTACCCTTGCTGACTA 167625 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 ||| ||||||||||||||||| ||||| |||| | ||| | || || || Sbjct 167624 CAACATTCAGAAGGAATCTACCCTTCACTTGGTGCTTCGTCTTCGTGGTGG 167574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358013065062400